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Matthias Benoit - Publications

Affiliations: 
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 
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19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Satterlee JW, Alonso D, Gramazio P, Jenike KM, He J, Arrones A, Villanueva G, Plazas M, Ramakrishnan S, Benoit M, Gentile I, Hendelman A, Shohat H, Fitzgerald B, Robitaille GM, et al. Convergent evolution of plant prickles by repeated gene co-option over deep time. Science (New York, N.Y.). 385: eado1663. PMID 39088611 DOI: 10.1126/science.ado1663  0.697
2024 Zanetti ME, Blanco F, Ferrari M, Ariel F, Benoit M, Niebel A, Crespi M. Epigenetic control during root development and symbiosis. Plant Physiology. PMID 38865442 DOI: 10.1093/plphys/kiae333  0.355
2022 He J, Alonge M, Ramakrishnan S, Benoit M, Soyk S, Reem NT, Hendelman A, Van Eck J, Schatz MC, Lippman ZB. Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome. The Plant Cell. PMID 36268892 DOI: 10.1093/plcell/koac305  0.685
2021 Benoit M, Drost HG. A Predictive Approach to Infer the Activity and Natural Variation of Retrotransposon Families in Plants. Methods in Molecular Biology (Clifton, N.J.). 2250: 1-14. PMID 33900588 DOI: 10.1007/978-1-0716-1134-0_1  0.774
2021 Wang X, Aguirre L, Rodríguez-Leal D, Hendelman A, Benoit M, Lippman ZB. Dissecting cis-regulatory control of quantitative trait variation in a plant stem cell circuit. Nature Plants. 7: 419-427. PMID 33846596 DOI: 10.1038/s41477-021-00898-x  0.696
2020 Soyk S, Benoit M, Lippman ZB. New Horizons for Dissecting Epistasis in Crop Quantitative Trait Variation. Annual Review of Genetics. PMID 32870731 DOI: 10.1146/Annurev-Genet-050720-122916  0.718
2020 Benoit M. The Great Escape: How a Plant DNA Virus Hijacks an Imprinted Host Gene to Avoid Silencing. The Plant Cell. 32: 3051-3052. PMID 32796120 DOI: 10.1105/Tpc.20.00631  0.405
2020 Benoit M. In the Transcripts: Long-Read Transcriptomics Enables a Novel Type of Transposable Element Annotation in Plants. The Plant Cell. 32: 2661-2662. PMID 32665309 DOI: 10.1105/Tpc.20.00523  0.593
2020 Alonge M, Wang X, Benoit M, Soyk S, Pereira L, Zhang L, Suresh H, Ramakrishnan S, Maumus F, Ciren D, Levy Y, Harel TH, Shalev-Schlosser G, Amsellem Z, Razifard H, et al. Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato. Cell. PMID 32553272 DOI: 10.1016/J.Cell.2020.05.021  0.743
2020 Benoit M. Shooting for the STARRs: A Modified STARR-seq Assay for Rapid Identification and Evaluation of Plant Regulatory Sequences in Tobacco Leaves The Plant Cell. 32: 2057-2058. PMID 32434853 DOI: 10.1105/Tpc.20.00392  0.515
2020 Benoit M. Glyphosate Resistance Decoded: The Reference Sequence of the Extrachromosomal DNA Replicon in Amaranth. The Plant Cell. 32: 2059-2060. PMID 32354789 DOI: 10.1105/Tpc.20.00339  0.503
2020 Benoit M. On the Importance of Variation: A High-Resolution Map of Copy Number Variants in Arabidopsis. The Plant Cell. 32: 1771-1772. PMID 32265264 DOI: 10.1105/Tpc.20.00257  0.468
2019 Benoit M, Drost HG, Catoni M, Gouil Q, Lopez-Gomollon S, Baulcombe D, Paszkowski J. Environmental and epigenetic regulation of Rider retrotransposons in tomato. Plos Genetics. 15: e1008370. PMID 31525177 DOI: 10.1371/Journal.Pgen.1008370  0.681
2018 Cho J, Benoit M, Catoni M, Drost HG, Brestovitsky A, Oosterbeek M, Paszkowski J. Sensitive detection of pre-integration intermediates of long terminal repeat retrotransposons in crop plants. Nature Plants. PMID 30531940 DOI: 10.1038/S41477-018-0320-9  0.612
2018 Benoit M, Simon L, Desset S, Duc C, Cotterell S, Poulet A, Le Goff S, Tatout C, Probst AV. Replication-coupled histone H3.1 deposition determines nucleosome composition and heterochromatin dynamics during Arabidopsis seedling development. The New Phytologist. PMID 29897636 DOI: 10.1111/Nph.15248  0.352
2017 Duc C, Benoit M, Détourné G, Simon L, Poulet A, Jung M, Veluchamy A, Latrasse D, Le Goff S, Cotterell S, Tatout C, Benhamed M, Probst AV. Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression. The Plant Cell. PMID 28684426 DOI: 10.1105/Tpc.16.00877  0.373
2017 Poulet A, Duc C, Voisin M, Desset S, Tutois S, Vanrobays E, Benoit M, Evans DE, Probst AV, Tatout C. The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants. Journal of Cell Science. PMID 28049722 DOI: 10.1242/Jcs.194712  0.491
2015 Duc C, Benoit M, Le Goff S, Simon L, Poulet A, Cotterell S, Tatout C, Probst AV. The histone chaperone complex HIR maintains nucleosome occupancy and counterbalances impaired histone deposition in CAF-1 complex mutants. The Plant Journal : For Cell and Molecular Biology. 81: 707-22. PMID 25600486 DOI: 10.1111/Tpj.12758  0.377
2013 Benoit M, Layat E, Tourmente S, Probst AV. Heterochromatin dynamics during developmental transitions in Arabidopsis - a focus on ribosomal DNA loci. Gene. 526: 39-45. PMID 23410919 DOI: 10.1016/J.Gene.2013.01.060  0.416
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