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Rasmi Thomas - Publications

Affiliations: 
2000-2005 US Military HIV Research Program Walter Reed Army Institute of Research, Silver Spring, MD, United States 
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25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Shangguan S, Ehrenberg PK, Geretz A, Butler L, Pinyakorn S, Sriplienchan S, Sacdalan C, Chomchey N, Phanuphak N, Tovanabutra S, Vasan S, Hsu D, Thomas R. HLA-B*57 and B*58 associate with predictors of reservoir size in an acutely treated HIV cohort. Aids Research and Human Retroviruses. PMID 36465028 DOI: 10.1089/AID.2022.0082  0.31
2022 Walker-Sperling V, Digitale JC, Viard M, Martin MP, Bashirova A, Yuki Y, Ramsuran V, Kulkarni S, Naranbhai V, Li H, Anderson SK, Yum L, Clifford R, Kibuuka H, Ake J, ... Thomas R, et al. Genetic variation that determines expression levels associates with the course of malaria in an HLA allotype-dependent manner. Proceedings of the National Academy of Sciences of the United States of America. 119: e2205498119. PMID 35858344 DOI: 10.1073/pnas.2205498119  0.348
2022 Li SS, Hickey A, Shangguan S, Ehrenberg PK, Geretz A, Butler L, Kundu G, Apps R, Creegan M, Clifford RJ, Pinyakorn S, Eller LA, Luechai P, Gilbert PB, Holtz TH, ... ... Thomas R, et al. HLA-B∗46 associates with rapid HIV disease progression in Asian cohorts and prominent differences in NK cell phenotype. Cell Host & Microbe. PMID 35841889 DOI: 10.1016/j.chom.2022.06.005  0.39
2021 Thomas R, Chansinghakul D, Limkittikul K, Gilbert PB, Hattasingh W, Moodie Z, Shangguan S, Frago C, Dulyachai W, Li SS, Jarman RG, Geretz A, Bouckenooghe A, Sabchareon A, Juraska M, et al. Associations of human leukocyte antigen with neutralizing antibody titers in a tetravalent dengue vaccine phase 2 efficacy trial in Thailand. Human Immunology. PMID 34635391 DOI: 10.1016/j.humimm.2021.09.006  0.403
2021 Creary LE, Sacchi N, Mazzocco M, Morris GP, Montero-Martin G, Chong W, Brown CJ, Dinou A, Stavropoulos-Giokas C, Gorodezky C, Narayan S, Periathiruvadi S, Thomas R, De Santis D, Pepperall J, et al. High-resolution HLA allele and haplotype frequencies in several unrelated populations determined by next generation sequencing: 17th International HLA and Immunogenetics Workshop joint report. Human Immunology. PMID 34030896 DOI: 10.1016/j.humimm.2021.04.007  0.549
2020 Geretz A, Cofer L, Ehrenberg PK, Currier JR, Yoon IK, Alera MTP, Jarman R, Rothman AL, Thomas R. Next-generation sequencing of 11 HLA loci in a large dengue vaccine cohort from the Philippines. Human Immunology. PMID 32654962 DOI: 10.1016/j.humimm.2020.06.010  0.559
2019 Geraghty DE, Thorball CW, Fellay J, Thomas R. Effect of Fc Receptor Genetic Diversity on HIV-1 Disease Pathogenesis. Frontiers in Immunology. 10: 970. PMID 31143176 DOI: 10.3389/fimmu.2019.00970  0.301
2019 Osoegawa K, Vayntrub TA, Wenda S, De Santis D, Barsakis K, Ivanova M, Hsu S, Barone J, Holdsworth R, Diviney M, Askar M, Willis A, Railton D, Laflin S, Gendzekhadze K, ... ... Thomas R, et al. Quality Control Project of NGS HLA Genotyping for the 17 International HLA and Immunogenetics Workshop. Human Immunology. PMID 30738112 DOI: 10.1016/J.Humimm.2019.01.009  0.575
2018 Geretz A, Ehrenberg PK, Bouckenooghe A, Fernández Viña MA, Michael NL, Chansinghakule D, Limkittikul K, Thomas R. Full-length next-generation sequencing of HLA class I and II genes in a cohort from Thailand. Human Immunology. PMID 30243890 DOI: 10.1016/j.humimm.2018.09.005  0.677
2018 Bachtel ND, Umviligihozo G, Pickering S, Mota T, Liang H, Del Prete GQ, Chatterjee P, Lee GQ, Thomas R, Brockman MA, Neil S, Carrington M, Bwana B, Bangsberg DR, Martin JN, et al. HLA-C downregulation by HIV-1 adapts to host HLA genotype. Plos Pathogens. 14: e1007257. PMID 30180214 DOI: 10.1371/Journal.Ppat.1007257  0.47
2018 Yarzabek B, Zaitouna AJ, Olson E, Silva GN, Geng J, Geretz A, Thomas R, Krishnakumar S, Ramon DS, Raghavan M. Variations in HLA-B cell surface expression, half-life and extracellular antigen receptivity. Elife. 7. PMID 29989547 DOI: 10.7554/eLife.34961  0.552
2018 Ehrenberg PK, Geretz A, Thomas R. High-Throughput Contiguous Full-Length Next-Generation Sequencing of HLA Class I and II Genes from 96 Donors in a Single MiSeq Run. Methods in Molecular Biology (Clifton, N.J.). 1802: 89-100. PMID 29858803 DOI: 10.1007/978-1-4939-8546-3_6  0.461
2018 Martin MP, Naranbhai V, Shea PR, Qi Y, Ramsuran V, Vince N, Gao X, Thomas R, Brumme ZL, Carlson JM, Wolinsky SM, Goedert JJ, Walker BD, Segal FP, Deeks SG, et al. Killer cell immunoglobulin-like receptor 3DL1 variation modifies HLA-B*57 protection against HIV-1. The Journal of Clinical Investigation. PMID 29461980 DOI: 10.1172/JCI98463  0.461
2016 Apps R, Del Prete GQ, Chatterjee P, Lara A, Brumme ZL, Brockman MA, Neil S, Pickering S, Schneider DK, Piechocka-Trocha A, Walker BD, Thomas R, Shaw GM, Hahn BH, Keele BF, et al. HIV-1 Vpu Mediates HLA-C Downregulation. Cell Host & Microbe. 19: 686-95. PMID 27173934 DOI: 10.1016/J.Chom.2016.04.005  0.454
2015 Prentice HA, Tomaras GD, Geraghty DE, Apps R, Fong Y, Ehrenberg PK, Rolland M, Kijak GH, Krebs SJ, Nelson W, DeCamp A, Shen X, Yates NL, Zolla-Pazner S, Nitayaphan S, ... ... Thomas R, et al. HLA class II genes modulate vaccine-induced antibody responses to affect HIV-1 acquisition. Science Translational Medicine. 7: 296ra112. PMID 26180102 DOI: 10.1126/Scitranslmed.Aab4005  0.383
2014 Ehrenberg PK, Geretz A, Baldwin KM, Apps R, Polonis VR, Robb ML, Kim JH, Michael NL, Thomas R. High-throughput multiplex HLA genotyping by next-generation sequencing using multi-locus individual tagging. Bmc Genomics. 15: 864. PMID 25283548 DOI: 10.1186/1471-2164-15-864  0.483
2014 Prentice HA, Ehrenberg PK, Baldwin KM, Geretz A, Andrews C, Nitayaphan S, Rerks-Ngarm S, Kaewkungwal J, Pitisuttithum P, O'Connell RJ, Robb ML, Kim JH, Michael NL, Thomas R. HLA class I, KIR, and genome-wide SNP diversity in the RV144 Thai phase 3 HIV vaccine clinical trial. Immunogenetics. 66: 299-310. PMID 24682434 DOI: 10.1007/S00251-014-0765-6  0.586
2013 Apps R, Qi Y, Carlson JM, Chen H, Gao X, Thomas R, Yuki Y, Del Prete GQ, Goulder P, Brumme ZL, Brumme CJ, John M, Mallal S, Nelson G, Bosch R, et al. Influence of HLA-C expression level on HIV control. Science (New York, N.Y.). 340: 87-91. PMID 23559252 DOI: 10.1126/Science.1232685  0.54
2012 Thomas R, Thio CL, Apps R, Qi Y, Gao X, Marti D, Stein JL, Soderberg KA, Moody MA, Goedert JJ, Kirk GD, Hoots WK, Wolinsky S, Carrington M. A novel variant marking HLA-DP expression levels predicts recovery from hepatitis B virus infection. Journal of Virology. 86: 6979-85. PMID 22496224 DOI: 10.1128/JVI.00406-12  0.522
2011 Apps R, Sharkey A, Gardner L, Male V, Kennedy P, Masters L, Farrell L, Jones D, Thomas R, Moffett A. Ex vivo functional responses to HLA-G differ between blood and decidual NK cells. Molecular Human Reproduction. 17: 577-86. PMID 21471023 DOI: 10.1093/molehr/gar022  0.331
2011 Bashirova AA, Thomas R, Carrington M. HLA/KIR restraint of HIV: surviving the fittest. Annual Review of Immunology. 29: 295-317. PMID 21219175 DOI: 10.1146/annurev-immunol-031210-101332  0.419
2010 Wang SS, Abdou AM, Morton LM, Thomas R, Cerhan JR, Gao X, Cozen W, Rothman N, Davis S, Severson RK, Bernstein L, Hartge P, Carrington M. Human leukocyte antigen class I and II alleles in non-Hodgkin lymphoma etiology. Blood. 115: 4820-3. PMID 20385791 DOI: 10.1182/Blood-2010-01-266775  0.589
2009 Thomas R, Apps R, Qi Y, Gao X, Male V, O'hUigin C, O'Connor G, Ge D, Fellay J, Martin JN, Margolick J, Goedert JJ, Buchbinder S, Kirk GD, Martin MP, et al. HLA-C cell surface expression and control of HIV/AIDS correlate with a variant upstream of HLA-C. Nature Genetics. 41: 1290-4. PMID 19935663 DOI: 10.1038/Ng.486  0.46
2007 Roshna T, Thomas R, Nandakumar K, Banerjee M. A case-control study on the association of human leukocyte antigen-A*9 and -B*15 alleles with generalized aggressive periodontitis in an Indian population. Journal of Periodontology. 77: 1954-63. PMID 17209778 DOI: 10.1902/jop.2006.040411  0.48
2006 Thomas R, Philip J, Banerjee M. Association of an extended haplotype of HLA class I alleles and their flanking microsatellites with spondyloarthropathies in South Indian patients. Human Immunology. 67: 318-23. PMID 16720212 DOI: 10.1016/j.humimm.2006.02.022  0.478
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