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Matthew E. Mead - Publications

Affiliations: 
2015-2022 Department of Biological Sciences Vanderbilt University, Nashville, TN 
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27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Steenwyk JL, Knowles S, Bastos RW, Balamurugan C, Rinker D, Mead ME, Roberts CD, Raja HA, Li Y, Colabardini AC, de Castro PA, Dos Reis TF, Gumilang A, Almagro-Molto M, Alanio A, et al. Evolutionary origin and population diversity of a cryptic hybrid pathogen. Nature Communications. 15: 8412. PMID 39333551 DOI: 10.1038/s41467-024-52639-1  0.803
2024 Pinzan CF, Valero C, de Castro PA, da Silva JL, Earle K, Liu H, Horta MAC, Kniemeyer O, Krüger T, Pschibul A, Cömert DN, Heinekamp T, Brakhage AA, Steenwyk JL, Mead ME, et al. Aspergillus fumigatus conidial surface-associated proteome reveals factors for fungal evasion and host immunity modulation. Nature Microbiology. PMID 39191887 DOI: 10.1038/s41564-024-01782-y  0.716
2023 Goldman G, Valero C, Pinzan C, de Castro P, van Rhijn N, Earle K, Liu H, Horta MA, Kniemeyer O, Kruger T, Pschibul A, Coemert D, Heinekamp T, Brakhage A, Steenwyk J, ... Mead M, et al. A phylogenetic approach to explore the conidial surface-associated proteome and its role in pathogenesis. Research Square. PMID 37790311 DOI: 10.21203/rs.3.rs-3306535/v1  0.752
2023 Valero C, Pinzan CF, de Castro PA, van Rhijn N, Earle K, Liu H, Horta MAC, Kniemeyer O, Krüger T, Pschibul A, Coemert DN, Heinekamp T, Brakhage AA, Steenwyk JL, Mead ME, et al. A phylogenetic approach to explore the conidial surface-associated proteome and its role in pathogenesis. Biorxiv : the Preprint Server For Biology. PMID 37662192 DOI: 10.1101/2023.08.22.553365  0.752
2023 Steenwyk JL, Knowles S, Bastos RW, Balamurugan C, Rinker D, Mead ME, Roberts CD, Raja HA, Li Y, Colabardini AC, de Castro PA, Dos Reis TF, Canóvas D, Sanchez RL, Lagrou K, et al. Evolutionary origin, population diversity, and diagnostics for a cryptic hybrid pathogen. Biorxiv : the Preprint Server For Biology. PMID 37461539 DOI: 10.1101/2023.07.03.547508  0.819
2023 Mead ME, de Castro PA, Steenwyk JL, Gangneux JP, Hoenigl M, Prattes J, Rautemaa-Richardson R, Guegan H, Moore CB, Lass-Flörl C, Reizine F, Valero C, Van Rhijn N, Bromley MJ, Rokas A, et al. COVID-19-Associated Pulmonary Aspergillosis Isolates Are Genomically Diverse but Similar to Each Other in Their Responses to Infection-Relevant Stresses. Microbiology Spectrum. e0512822. PMID 36946762 DOI: 10.1128/spectrum.05128-22  0.777
2022 Brown A, Mead ME, Steenwyk JL, Goldman GH, Rokas A. Extensive non-coding sequence divergence between the major human pathogen and its relatives. Frontiers in Fungal Biology. 3. PMID 36866034 DOI: 10.3389/ffunb.2022.802494  0.793
2022 Horta MAC, Steenwyk JL, Mead ME, Dos Santos LHB, Zhao S, Gibbons JG, Marcet-Houben M, Gabaldón T, Rokas A, Goldman GH. Examination of Genome-Wide Ortholog Variation in Clinical and Environmental Isolates of the Fungal Pathogen Aspergillus fumigatus. Mbio. e0151922. PMID 35766381 DOI: 10.1128/mbio.01519-22  0.817
2022 Steenwyk JL, Buida Iii TJ, Gonçalves C, Goltz DC, Morales G, Mead ME, LaBella AL, Chavez CM, Schmitz JE, Hadjifrangiskou M, Li Y, Rokas A. BioKIT: a versatile toolkit for processing and analyzing diverse types of sequence data. Genetics. PMID 35536198 DOI: 10.1093/genetics/iyac079  0.709
2021 Dos Santos RAC, Mead ME, Steenwyk JL, Rivero-Menéndez O, Alastruey-Izquierdo A, Goldman GH, Rokas A. Examining Signatures of Natural Selection in Antifungal Resistance Genes Across Fungi. Frontiers in Fungal Biology. 2: 723051. PMID 37744093 DOI: 10.3389/ffunb.2021.723051  0.703
2021 Steenwyk JL, Mead ME, de Castro PA, Valero C, Damasio A, Dos Santos RAC, Labella AL, Li Y, Knowles SL, Raja HA, Oberlies NH, Zhou X, Cornely OA, Fuchs F, Koehler P, et al. Genomic and Phenotypic Analysis of COVID-19-Associated Pulmonary Aspergillosis Isolates of Aspergillus fumigatus. Microbiology Spectrum. e0001021. PMID 34106569 DOI: 10.1128/Spectrum.00010-21  0.81
2021 Mead ME, Steenwyk JL, Silva LP, de Castro PA, Saeed N, Hillmann F, Goldman GH, Rokas A. An evolutionary genomic approach reveals both conserved and species-specific genetic elements related to human disease in closely related Aspergillus fungi. Genetics. PMID 33944921 DOI: 10.1093/genetics/iyab066  0.788
2021 Wu MY, Mead ME, Lee MK, Neuhaus GF, Adpressa DA, Martien JI, Son YE, Moon H, Amador-Noguez D, Han KH, Rokas A, Loesgen S, Yu JH, Park HS. Transcriptomic, Protein-DNA Interaction, and Metabolomic Studies of VosA, VelB, and WetA in Aspergillus nidulans Asexual Spores. Mbio. 12. PMID 33563821 DOI: 10.1128/mBio.03128-20  0.556
2020 Hatmaker EA, Zhou X, Mead ME, Moon H, Yu JH, Rokas A. Revised Transcriptome-Based Gene Annotation for Aspergillus flavus Strain NRRL 3357. Microbiology Resource Announcements. 9. PMID 33273000 DOI: 10.1128/MRA.01155-20  0.801
2020 Steenwyk JL, Mead ME, de Castro PA, Valero C, Damasio A, Dos Santos RAC, Labella AL, Li Y, Knowles SL, Raja HA, Oberlies NH, Zhou X, Cornely OA, Fuchs F, Koehler P, et al. Genomic and phenotypic analysis of COVID-19-associated pulmonary aspergillosis isolates of . Biorxiv : the Preprint Server For Biology. PMID 33173866 DOI: 10.1101/2020.11.06.371971  0.813
2020 Dos Santos RAC, Rivero-Menendez O, Steenwyk JL, Mead ME, Goldman GH, Alastruey-Izquierdo A, Rokas A. Draft Genome Sequences of Four Section Clinical Strains. Microbiology Resource Announcements. 9. PMID 33004453 DOI: 10.1128/MRA.00856-20  0.751
2020 Steenwyk JL, Mead ME, Knowles SL, Raja HA, Roberts CD, Bader O, Houbraken J, Goldman GH, Oberlies NH, Rokas A. Variation Among Biosynthetic Gene Clusters, Secondary Metabolite Profiles, and Cards of Virulence Across Species. Genetics. PMID 32817009 DOI: 10.1534/Genetics.120.303549  0.784
2020 Dos Santos RAC, Steenwyk JL, Rivero-Menendez O, Mead ME, Silva LP, Bastos RW, Alastruey-Izquierdo A, Goldman GH, Rokas A. Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens , , and . Frontiers in Genetics. 11: 459. PMID 32477406 DOI: 10.3389/fgene.2020.00459  0.788
2020 Mead ME, Borowsky AT, Joehnk B, Steenwyk JL, Shen XX, Sil A, Rokas A. Recurrent loss of abaA, a master regulator of asexual development in filamentous fungi, correlates with changes in genomic and morphological traits. Genome Biology and Evolution. PMID 32442273 DOI: 10.1093/Gbe/Evaa107  0.818
2020 Rokas A, Mead ME, Steenwyk JL, Oberlies NH, Goldman GH. Evolving moldy murderers: Aspergillus section Fumigati as a model for studying the repeated evolution of fungal pathogenicity. Plos Pathogens. 16: e1008315. PMID 32106242 DOI: 10.1371/Journal.Ppat.1008315  0.705
2020 Knowles SL, Mead ME, Silva LP, Raja HA, Steenwyk JL, Goldman GH, Oberlies NH, Rokas A. Gliotoxin, a Known Virulence Factor in the Major Human Pathogen Aspergillus fumigatus, Is Also Biosynthesized by Its Nonpathogenic Relative . Mbio. 11. PMID 32047138 DOI: 10.1128/Mbio.03361-19  0.777
2020 Rokas A, Mead ME, Steenwyk JL, Raja HA, Oberlies NH. Biosynthetic gene clusters and the evolution of fungal chemodiversity. Natural Product Reports. PMID 31898704 DOI: 10.1039/C9Np00045C  0.729
2019 Mead ME, Raja HA, Steenwyk JL, Knowles SL, Oberlies NH, Rokas A. Draft Genome Sequence of the Griseofulvin-Producing Fungus Xylaria flabelliformis Strain G536. Microbiology Resource Announcements. 8. PMID 31537670 DOI: 10.1128/MRA.00890-19  0.758
2019 Knowles SL, Raja HA, Wright AJ, Lee AML, Caesar LK, Cech NB, Mead ME, Steenwyk JL, Ries LNA, Goldman GH, Rokas A, Oberlies NH. Mapping the Fungal Battlefield: Using Chemistry and Deletion Mutants to Monitor Interspecific Chemical Interactions Between Fungi. Frontiers in Microbiology. 10: 285. PMID 30837981 DOI: 10.3389/Fmicb.2019.00285  0.684
2019 Mead ME, Knowles SL, Raja HA, Beattie SR, Kowalski CH, Steenwyk JL, Silva LP, Chiaratto J, Ries LNA, Goldman GH, Cramer RA, Oberlies NH, Rokas A. Characterizing the Pathogenic, Genomic, and Chemical Traits of , a Close Relative of the Major Human Fungal Pathogen . Msphere. 4. PMID 30787113 DOI: 10.1128/mSphere.00018-19  0.781
2018 Wu MY, Mead ME, Lee MK, Ostrem Loss EM, Kim SC, Rokas A, Yu JH. Systematic Dissection of the Evolutionarily Conserved WetA Developmental Regulator across a Genus of Filamentous Fungi. Mbio. 9. PMID 30131357 DOI: 10.1128/mBio.01130-18  0.572
2017 Wu MY, Mead ME, Kim SC, Rokas A, Yu JH. WetA bridges cellular and chemical development in Aspergillus flavus. Plos One. 12: e0179571. PMID 28658268 DOI: 10.1371/Journal.Pone.0179571  0.532
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