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Jesse Rinehart, Ph.D. - Publications

Affiliations: 
Yale University, New Haven, CT 
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45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Moen JM, Mohler K, Rogulina S, Shi X, Shen H, Rinehart J. Enhanced access to the human phosphoproteome with genetically encoded phosphothreonine. Nature Communications. 13: 7226. PMID 36433969 DOI: 10.1038/s41467-022-34980-5  0.302
2020 Zhang H, Lyu Z, Fan Y, Evans CR, Barber KW, Banerjee K, Igoshin OA, Rinehart J, Ling J. Metabolic stress promotes stop-codon readthrough and phenotypic heterogeneity. Proceedings of the National Academy of Sciences of the United States of America. PMID 32839318 DOI: 10.1073/Pnas.2013543117  0.573
2019 Han NC, Bullwinkle TJ, Loeb KF, Faull KF, Mohler K, Rinehart J, Ibba M. The mechanism of β-N-methylamino-L-alanine inhibition of tRNA aminoacylation and its impact on misincorporation. The Journal of Biological Chemistry. PMID 31862734 DOI: 10.1074/Jbc.Ra119.011714  0.419
2019 Kelly P, Backes N, Mohler K, Buser C, Kavoor A, Rinehart J, Phillips G, Ibba M. Alanyl-tRNA Synthetase Quality Control Prevents Global Dysregulation of the Escherichia coli Proteome. Mbio. 10. PMID 31848288 DOI: 10.1128/Mbio.02921-19  0.332
2019 Mohler K, Rinehart J. Expression of authentic post-translationally modified proteins in organisms with expanded genetic codes. Methods in Enzymology. 626: 539-559. PMID 31606090 DOI: 10.1016/Bs.Mie.2019.07.017  0.382
2018 Ma NJ, Hemez CF, Barber KW, Rinehart J, Isaacs FJ. Organisms with alternative genetic codes resolve unassigned codons via mistranslation and ribosomal rescue. Elife. 7. PMID 30375330 DOI: 10.7554/Elife.34878  0.359
2018 Thomas Y, Scott DC, Kristariyanto YA, Rinehart J, Clark K, Cohen P, Kurz T. The NEDD8 E3 ligase DCNL5 is phosphorylated by IKK alpha during Toll-like receptor activation. Plos One. 13: e0199197. PMID 29958295 DOI: 10.1371/Journal.Pone.0199197  0.3
2018 Barber KW, Miller CJ, Jun JW, Lou HJ, Turk BE, Rinehart J. Kinase Substrate Profiling Using a Proteome-wide Serine-Oriented Human Peptide Library. Biochemistry. PMID 29920078 DOI: 10.1021/Acs.Biochem.8B00410  0.312
2018 Barber KW, Muir P, Szeligowski RV, Rogulina S, Gerstein M, Sampson JR, Isaacs FJ, Rinehart J. Encoding human serine phosphopeptides in bacteria for proteome-wide identification of phosphorylation-dependent interactions. Nature Biotechnology. PMID 29889213 DOI: 10.1038/Nbt.4150  0.36
2018 Barber KW, Rinehart J. The ABCs of PTMs. Nature Chemical Biology. 14: 188-192. PMID 29443972 DOI: 10.1038/Nchembio.2572  0.337
2017 D'Lima NG, Khitun A, Rosenbloom AD, Yuan P, Gassaway BM, Barber KW, Rinehart J, Slavoff SA. Comparative proteomics enables identification of non-annotated cold shock proteins in E. coli. Journal of Proteome Research. PMID 28861998 DOI: 10.1021/Acs.Jproteome.7B00419  0.359
2017 Fan Y, Evans CR, Barber KW, Banerjee K, Weiss KJ, Margolin W, Igoshin OA, Rinehart J, Ling J. Heterogeneity of Stop Codon Readthrough in Single Bacterial Cells and Implications for Population Fitness. Molecular Cell. PMID 28781237 DOI: 10.1016/J.Molcel.2017.07.010  0.507
2017 Barber KW, Rinehart J. Expression of Recombinant Phosphoproteins for Signal Transduction Studies. Methods in Molecular Biology (Clifton, N.J.). 1636: 71-78. PMID 28730473 DOI: 10.1007/978-1-4939-7154-1_5  0.386
2017 Park HB, Perez CE, Barber KW, Rinehart J, Crawford JM. Genome mining unearths a hybrid nonribosomal peptide synthetase-like-pteridine synthase biosynthetic gene cluster. Elife. 6. PMID 28431213 DOI: 10.7554/Elife.25229  0.324
2017 Mohler K, Mann R, Bullwinkle TJ, Hopkins K, Hwang L, Reynolds NM, Gassaway B, Aerni HR, Rinehart J, Polymenis M, Faull K, Ibba M. Editing of misaminoacylated tRNA controls the sensitivity of amino acid stress responses in Saccharomyces cerevisiae. Nucleic Acids Research. PMID 28168297 DOI: 10.1093/Nar/Gkx077  0.438
2017 Mohler K, Aerni HR, Gassaway B, Ling J, Ibba M, Rinehart J. MS-READ: Quantitative Measurement of Amino Acid Incorporation. Biochimica Et Biophysica Acta. PMID 28130155 DOI: 10.1016/J.Bbagen.2017.01.025  0.569
2015 Amiram M, Haimovich AD, Fan C, Wang YS, Aerni HR, Ntai I, Moonan DW, Ma NJ, Rovner AJ, Hong SH, Kelleher NL, Goodman AL, Jewett MC, Söll D, Rinehart J, et al. Evolution of translation machinery in recoded bacteria enables multi-site incorporation of nonstandard amino acids. Nature Biotechnology. PMID 26571098 DOI: 10.1038/Nbt.3372  0.739
2015 Heo JM, Ordureau A, Paulo JA, Rinehart J, Harper JW. The PINK1-PARKIN Mitochondrial Ubiquitylation Pathway Drives a Program of OPTN/NDP52 Recruitment and TBK1 Activation to Promote Mitophagy. Molecular Cell. PMID 26365381 DOI: 10.1016/J.Molcel.2015.08.016  0.322
2015 Oza JP, Aerni HR, Pirman NL, Barber KW, Ter Haar CM, Rogulina S, Amrofell MB, Isaacs FJ, Rinehart J, Jewett MC. Robust production of recombinant phosphoproteins using cell-free protein synthesis. Nature Communications. 6: 8168. PMID 26350765 DOI: 10.1038/Ncomms9168  0.365
2015 Pirman NL, Barber KW, Aerni HR, Ma NJ, Haimovich AD, Rogulina S, Isaacs FJ, Rinehart J. A flexible codon in genomically recoded Escherichia coli permits programmable protein phosphorylation. Nature Communications. 6: 8130. PMID 26350500 DOI: 10.1038/Ncomms9130  0.374
2015 Hoesl MG, Oehm S, Durkin P, Darmon E, Peil L, Aerni HR, Rappsilber J, Rinehart J, Leach D, Söll D, Budisa N. Chemical Evolution of a Bacterial Proteome. Angewandte Chemie (International Ed. in English). 54: 10030-4. PMID 26136259 DOI: 10.1002/Anie.201502868  0.541
2015 Ordureau A, Heo JM, Duda DM, Paulo JA, Olszewski JL, Yanishevski D, Rinehart J, Schulman BA, Harper JW. Defining roles of PARKIN and ubiquitin phosphorylation by PINK1 in mitochondrial quality control using a ubiquitin replacement strategy. Proceedings of the National Academy of Sciences of the United States of America. 112: 6637-42. PMID 25969509 DOI: 10.1073/Pnas.1506593112  0.35
2015 Rovner AJ, Haimovich AD, Katz SR, Li Z, Grome MW, Gassaway BM, Amiram M, Patel JR, Gallagher RR, Rinehart J, Isaacs FJ. Recoded organisms engineered to depend on synthetic amino acids. Nature. 518: 89-93. PMID 25607356 DOI: 10.1038/Nature14095  0.385
2015 Aerni HR, Shifman MA, Rogulina S, O'Donoghue P, Rinehart J. Revealing the amino acid composition of proteins within an expanded genetic code. Nucleic Acids Research. 43: e8. PMID 25378305 DOI: 10.1093/Nar/Gku1087  0.456
2015 Hoesl MG, Oehm S, Durkin P, Darmon E, Peil L, Aerni H, Rappsilber J, Rinehart J, Leach D, Söll D, Budisa N. Inside Cover: Chemical Evolution of a Bacterial Proteome (Angew. Chem. Int. Ed. 34/2015) Angewandte Chemie International Edition. 54: 9726-9726. DOI: 10.1002/Anie.201506522  0.448
2015 Hoesl MG, Oehm S, Durkin P, Darmon E, Peil L, Aerni H, Rappsilber J, Rinehart J, Leach D, Söll D, Budisa N. Innentitelbild: Chemische Evolution eines bakteriellen Proteoms (Angew. Chem. 34/2015) Angewandte Chemie. 127: 9862-9862. DOI: 10.1002/Ange.201506522  0.47
2015 Hoesl MG, Oehm S, Durkin P, Darmon E, Peil L, Aerni H, Rappsilber J, Rinehart J, Leach D, Söll D, Budisa N. Chemische Evolution eines bakteriellen Proteoms Angewandte Chemie. 127: 10168-10172. DOI: 10.1002/Ange.201502868  0.485
2014 O'Donoghue P, Prat L, Kucklick M, Schäfer JG, Riedel K, Rinehart J, Söll D, Heinemann IU. Reducing the genetic code induces massive rearrangement of the proteome. Proceedings of the National Academy of Sciences of the United States of America. 111: 17206-11. PMID 25404328 DOI: 10.1073/Pnas.1420193111  0.558
2014 Sawyer N, Gassaway BM, Haimovich AD, Isaacs FJ, Rinehart J, Regan L. Designed phosphoprotein recognition in Escherichia coli. Acs Chemical Biology. 9: 2502-7. PMID 25272187 DOI: 10.1021/Cb500658W  0.34
2014 Steinfeld JB, Aerni HR, Rogulina S, Liu Y, Rinehart J. Expanded cellular amino acid pools containing phosphoserine, phosphothreonine, and phosphotyrosine. Acs Chemical Biology. 9: 1104-12. PMID 24646179 DOI: 10.1021/Cb5000532  0.435
2013 Lajoie MJ, Rovner AJ, Goodman DB, Aerni HR, Haimovich AD, Kuznetsov G, Mercer JA, Wang HH, Carr PA, Mosberg JA, Rohland N, Schultz PG, Jacobson JM, Rinehart J, Church GM, et al. Genomically recoded organisms expand biological functions. Science (New York, N.Y.). 342: 357-60. PMID 24136966 DOI: 10.1126/Science.1241459  0.381
2013 Krishnakumar R, Prat L, Aerni HR, Ling J, Merryman C, Glass JI, Rinehart J, Söll D. Transfer RNA misidentification scrambles sense codon recoding. Chembiochem : a European Journal of Chemical Biology. 14: 1967-72. PMID 24000185 DOI: 10.1002/Cbic.201300444  0.676
2012 Prat L, Heinemann IU, Aerni HR, Rinehart J, O'Donoghue P, Söll D. Carbon source-dependent expansion of the genetic code in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 109: 21070-5. PMID 23185002 DOI: 10.1073/Pnas.1218613110  0.535
2012 Ling J, Cho C, Guo LT, Aerni HR, Rinehart J, Söll D. Protein aggregation caused by aminoglycoside action is prevented by a hydrogen peroxide scavenger. Molecular Cell. 48: 713-22. PMID 23122414 DOI: 10.1016/J.Molcel.2012.10.001  0.618
2012 Heinemann IU, Rovner AJ, Aerni HR, Rogulina S, Cheng L, Olds W, Fischer JT, Söll D, Isaacs FJ, Rinehart J. Enhanced phosphoserine insertion during Escherichia coli protein synthesis via partial UAG codon reassignment and release factor 1 deletion. Febs Letters. 586: 3716-22. PMID 22982858 DOI: 10.1016/J.Febslet.2012.08.031  0.536
2012 Zarychanski R, Schulz VP, Houston BL, Maksimova Y, Houston DS, Smith B, Rinehart J, Gallagher PG. Mutations in the mechanotransduction protein PIEZO1 are associated with hereditary xerocytosis. Blood. 120: 1908-15. PMID 22529292 DOI: 10.1182/Blood-2012-04-422253  0.317
2011 Park HS, Hohn MJ, Umehara T, Guo LT, Osborne EM, Benner J, Noren CJ, Rinehart J, Söll D. Expanding the genetic code of Escherichia coli with phosphoserine. Science (New York, N.Y.). 333: 1151-4. PMID 21868676 DOI: 10.1126/Science.1207203  0.55
2009 Rinehart J, Maksimova YD, Tanis JE, Stone KL, Hodson CA, Zhang J, Risinger M, Pan W, Wu D, Colangelo CM, Forbush B, Joiner CH, Gulcicek EE, Gallagher PG, Lifton RP. Sites of regulated phosphorylation that control K-Cl cotransporter activity. Cell. 138: 525-36. PMID 19665974 DOI: 10.1016/J.Cell.2009.05.031  0.306
2008 Rubio MA, Rinehart JJ, Krett B, Duvezin-Caubet S, Reichert AS, Söll D, Alfonzo JD. Mammalian mitochondria have the innate ability to import tRNAs by a mechanism distinct from protein import. Proceedings of the National Academy of Sciences of the United States of America. 105: 9186-91. PMID 18587046 DOI: 10.1073/Pnas.0804283105  0.511
2008 Kahle KT, Rinehart J, Giebisch G, Gamba G, Hebert SC, Lifton RP. A novel protein kinase signaling pathway essential for blood pressure regulation in humans. Trends in Endocrinology and Metabolism: Tem. 19: 91-5. PMID 18280177 DOI: 10.1016/J.Tem.2008.01.001  0.318
2005 Rinehart J, Krett B, Rubio MA, Alfonzo JD, Söll D. Saccharomyces cerevisiae imports the cytosolic pathway for Gln-tRNA synthesis into the mitochondrion. Genes & Development. 19: 583-92. PMID 15706032 DOI: 10.1101/Gad.1269305  0.599
2004 Rinehart J, Horn EK, Wei D, Soll D, Schneider A. Non-canonical eukaryotic glutaminyl- and glutamyl-tRNA synthetases form mitochondrial aminoacyl-tRNA in Trypanosoma brucei. The Journal of Biological Chemistry. 279: 1161-6. PMID 14563839 DOI: 10.1074/Jbc.M310100200  0.544
2002 Rosas-Sandoval G, Ambrogelly A, Rinehart J, Wei D, Cruz-Vera LR, Graham DE, Stetter KO, Guarneros G, Söll D. Orthologs of a novel archaeal and of the bacterial peptidyl-tRNA hydrolase are nonessential in yeast. Proceedings of the National Academy of Sciences of the United States of America. 99: 16707-12. PMID 12475929 DOI: 10.1073/Pnas.222659199  0.536
2001 Stathopoulos C, Ahel I, Ali K, Ambrogelly A, Becker H, Bunjun S, Feng L, Herring S, Jacquin-Becker C, Kobayashi H, Korencic D, Krett B, Mejlhede N, Min B, Nakano H, ... ... Rinehart J, et al. Aminoacyl-tRNA synthesis: a postgenomic perspective. Cold Spring Harbor Symposia On Quantitative Biology. 66: 175-83. PMID 12762020 DOI: 10.1101/Sqb.2001.66.175  0.66
2001 Ruan B, Ahel I, Ambrogelly A, Becker HD, Bunjun S, Feng L, Tumbula-Hansen D, Ibba M, Korencic D, Kobayashi H, Jacquin-Becker C, Mejlhede N, Min B, Raczniak G, Rinehart J, et al. Genomics and the evolution of aminoacyl-tRNA synthesis. Acta Biochimica Polonica. 48: 313-21. PMID 11732603 DOI: 10.18388/Abp.2001_3917  0.76
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