Amy Herr - Publications

Affiliations: 
Bioengineering University of California, Berkeley, Berkeley, CA, United States 

77 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Molho JI, Gardner K, Herr AE. Lessons learned from our life science tools startup journey. Analytica Chimica Acta. 1244: 340446. PMID 36737142 DOI: 10.1016/j.aca.2022.340446  0.712
2021 Tan KY, Desai S, Raja E, Etienne C, Webb B, Herr AE. Comparison of photoactivatable crosslinkers for in-gel immunoassays. The Analyst. PMID 34591044 DOI: 10.1039/d1an01309b  0.309
2021 Gopal A, Herr AE. Segmentation-Based analysis of single-cell immunoblots. Electrophoresis. PMID 34357587 DOI: 10.1002/elps.202100144  0.315
2021 Rosàs-Canyelles E, Modzelewski AJ, Gomez Martinez AE, Geldert A, Gopal A, He L, Herr AE. Multimodal detection of protein isoforms and nucleic acids from low starting cell numbers. Lab On a Chip. PMID 33978041 DOI: 10.1039/d1lc00073j  0.318
2020 Mourdoukoutas AP, Grist SM, Herr AE. Rapid electrotransfer probing for improved detection sensitivity in in-gel immunoassays. Analytical Methods : Advancing Methods and Applications. 12: 4638-4648. PMID 33030469 DOI: 10.1039/d0ay01203c  0.301
2020 Tan KY, Herr AE. Ferguson analysis of protein electromigration during single-cell electrophoresis in an open microfluidic device. The Analyst. PMID 32347219 DOI: 10.1039/c9an02553g  0.35
2019 Gopal A, Herr AE. Multiplexed in-gel microfluidic immunoassays: characterizing protein target loss during reprobing of benzophenone-modified hydrogels. Scientific Reports. 9: 15389. PMID 31659305 DOI: 10.1038/s41598-019-51849-8  0.316
2019 Su EJ, Jeeawoody S, Herr AE. Protein diffusion from microwells with contrasting hydrogel domains. Apl Bioengineering. 3: 026101. PMID 31069338 DOI: 10.1063/1.5078650  0.303
2018 Pan Q, Herr AE. Geometry-induced injection dispersion in single-cell protein electrophoresis. Analytica Chimica Acta. 1000: 214-222. PMID 29289313 DOI: 10.1016/j.aca.2017.11.049  0.314
2017 Abdel-Sayed P, Yamauchi KA, Gerver RE, Herr AE. Fabrication of an open microfluidic device for immunoblotting. Analytical Chemistry. PMID 28825964 DOI: 10.1021/Acs.Analchem.7B02406  0.788
2015 Sinkala E, Herr AE. Single-Cell Western Blotting. Methods in Molecular Biology (Clifton, N.J.). 1346: 1-9. PMID 26542711 DOI: 10.1007/978-1-4939-2987-0_1  0.377
2015 Lin R, Skandarajah A, Gerver RE, Neira HD, Fletcher DA, Herr AE. A lateral electrophoretic flow diagnostic assay. Lab On a Chip. 15: 1488-96. PMID 25608872 DOI: 10.1039/C4Lc01370K  0.778
2015 Duncombe TA, Herr AE. Photo-patterned free-standing hydrogel microarrays for massively parallel protein analysis Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9320. DOI: 10.1117/12.2080665  0.378
2014 Gerver RE, Herr AE. Microfluidic Western blotting of low-molecular-mass proteins. Analytical Chemistry. 86: 10625-32. PMID 25268977 DOI: 10.1021/Ac5024588  0.794
2014 Chung M, Kim D, Herr AE. Polymer sieving matrices in microanalytical electrophoresis. The Analyst. 139: 5635-54. PMID 25195612 DOI: 10.1039/C4An01179A  0.347
2014 Hughes AJ, Spelke DP, Xu Z, Kang CC, Schaffer DV, Herr AE. Single-cell western blotting. Nature Methods. 11: 749-55. PMID 24880876 DOI: 10.1038/Nmeth.2992  0.565
2014 Pan Y, Karns K, Herr AE. Microfluidic electrophoretic mobility shift assays for quantitative biochemical analysis. Electrophoresis. 35: 2078-90. PMID 24591076 DOI: 10.1002/Elps.201300500  0.793
2014 Lin R, Gerver R, Karns K, Apori AA, Denisin AK, Herr AE. Next-generation confirmatory disease diagnostics Proceedings of Spie - the International Society For Optical Engineering. 9112. DOI: 10.1117/12.2065334  0.767
2014 Duncombe TA, Maurer K, Herr AE. Rapid microfluidic prototyping of sophisticated protein analysis platforms using grayscale photopatterning Proceedings of the Ieee International Conference On Micro Electro Mechanical Systems (Mems). 1027-1030. DOI: 10.1109/MEMSYS.2014.6765819  0.345
2013 Kim D, Herr AE. Protein immobilization techniques for microfluidic assays. Biomicrofluidics. 7: 41501. PMID 24003344 DOI: 10.1063/1.4816934  0.353
2013 Araz MK, Apori AA, Salisbury CM, Herr AE. Microfluidic barcode assay for antibody-based confirmatory diagnostics. Lab On a Chip. 13: 3910-20. PMID 23925585 DOI: 10.1039/c3lc50229e  0.31
2013 Chung M, Kim D, Herr AE. Microchamber Western blotting using poly-L-lysine conjugated polyacrylamide gel for blotting of sodium dodecyl sulfate coated proteins. Analytical Chemistry. 85: 7753-61. PMID 23848185 DOI: 10.1021/Ac401012J  0.365
2013 Araz MK, Tentori AM, Herr AE. Microfluidic multiplexing in bioanalyses. Journal of Laboratory Automation. 18: 350-66. PMID 23757343 DOI: 10.1177/2211068213491408  0.301
2013 Duncombe TA, Herr AE. Photopatterned free-standing polyacrylamide gels for microfluidic protein electrophoresis. Lab On a Chip. 13: 2115-23. PMID 23609800 DOI: 10.1039/c3lc50269d  0.394
2013 Tentori AM, Hughes AJ, Herr AE. Microchamber integration unifies distinct separation modes for two-dimensional electrophoresis. Analytical Chemistry. 85: 4538-45. PMID 23565932 DOI: 10.1021/Ac4001767  0.643
2013 Tia SQ, Brown K, Chen D, Herr AE. Protein post-translational modification analyses using on-chip immunoprobed isoelectric focusing. Analytical Chemistry. 85: 2882-90. PMID 23363036 DOI: 10.1021/Ac3035053  0.722
2013 Apori AA, Brozynski MN, El-Sayed IH, Herr AE. Microfluidic validation of diagnostic protein markers for spontaneous cerebrospinal fluid rhinorrhea. Journal of Proteome Research. 12: 1254-65. PMID 23343621 DOI: 10.1021/pr300928p  0.383
2013 Karns K, Vogan JM, Qin Q, Hickey SF, Wilson SC, Hammond MC, Herr AE. Microfluidic screening of electrophoretic mobility shifts elucidates riboswitch binding function. Journal of the American Chemical Society. 135: 3136-43. PMID 23343213 DOI: 10.1021/Ja310742M  0.769
2013 Hou C, Herr AE. Microfluidic integration of Western blotting is enabled by electrotransfer-assisted sodium dodecyl sulfate dilution. The Analyst. 138: 158-63. PMID 23042290 DOI: 10.1039/C2An36033K  0.577
2013 Apori AA, Herr AE. Chip-based immunoassays. Methods in Molecular Biology (Clifton, N.J.). 919: 233-48. PMID 22976105 DOI: 10.1007/978-1-62703-029-8_21  0.365
2013 Hughes AJ, Spelke DP, Xu Z, Schaffer DV, Herr AE. Single cell western blotting 17th International Conference On Miniaturized Systems For Chemistry and Life Sciences, Microtas 2013. 2: 1338-1340.  0.471
2012 Hughes AJ, Herr AE. Microfluidic Western blotting. Proceedings of the National Academy of Sciences of the United States of America. 109: 21450-5. PMID 23223527 DOI: 10.1073/Pnas.1207754110  0.654
2012 Hughes AJ, Tentori AM, Herr AE. Bistable isoelectric point photoswitching in green fluorescent proteins observed by dynamic immunoprobed isoelectric focusing. Journal of the American Chemical Society. 134: 17582-91. PMID 23017083 DOI: 10.1021/Ja3064292  0.526
2012 Denisin AK, Karns K, Herr AE. Post-collection processing of Schirmer strip-collected human tear fluid impacts protein content. The Analyst. 137: 5088-96. PMID 22991688 DOI: 10.1039/C2An35821B  0.79
2012 Duncombe TA, Herr AE. Use of polyacrylamide gel moving boundary electrophoresis to enable low-power protein analysis in a compact microdevice. Analytical Chemistry. 84: 8740-7. PMID 22971048 DOI: 10.1021/ac301875e  0.35
2012 Hughes AJ, Lin RK, Peehl DM, Herr AE. Microfluidic integration for automated targeted proteomic assays. Proceedings of the National Academy of Sciences of the United States of America. 109: 5972-7. PMID 22474344 DOI: 10.1073/Pnas.1108617109  0.642
2012 Kim D, Karns K, Tia SQ, He M, Herr AE. Electrostatic protein immobilization using charged polyacrylamide gels and cationic detergent microfluidic Western blotting. Analytical Chemistry. 84: 2533-40. PMID 22304398 DOI: 10.1021/Ac3000013  0.796
2012 Tia SQ, Hughes AJ, Karns K, Araz MK, He M, Kim D, Herr AE. Towards next-generation proteomic assays: Functional materials as sieving matrices and binding scaffolds Materials Research Society Symposium Proceedings. 1415: 137-145. DOI: 10.1557/Opl.2011.1537  0.766
2012 Duncombe TA, Tentori AM, Hou C, Herr AE. From bench-to-bedside: Realizing on-chip electrophoretic immunoassays for protein biomarkers in serum using a standard 9V battery Proceedings of the Ieee International Conference On Micro Electro Mechanical Systems (Mems). 827-830. DOI: 10.1109/MEMSYS.2012.6170313  0.528
2012 Herr A. Next Generation Proteomics: Towards High-Throughput Protein Analysis via Microfluidic Integration & Soft Materials Biophysical Journal. 102: 427a. DOI: 10.1016/J.Bpj.2011.11.2335  0.437
2012 Hughes AJ, Herr AE. 10 Minute western blotting with 54-plex throughput for clinical confirmatory hiv diagnosis in human serum Proceedings of the 16th International Conference On Miniaturized Systems For Chemistry and Life Sciences, Microtas 2012. 40-42.  0.588
2012 Duncombe TA, Tran TM, Benito-Lopez F, Diamond D, Herr AE. Open-channel microfluidics: Free-standing hydrogel microarrays for protein electrophoresis Technical Digest - Solid-State Sensors, Actuators, and Microsystems Workshop. 6-9.  0.349
2012 Tentori AM, Hughes AJ, Herr AE. Advancing next-generation proteomics: A polymer-patterned microchamber enables integration of the distinct protein separations comprising two-dimensional electrophoresis Technical Digest - Solid-State Sensors, Actuators, and Microsystems Workshop. 181-184.  0.602
2011 He M, Novak J, Julian BA, Herr AE. Membrane-assisted online renaturation for automated microfluidic lectin blotting. Journal of the American Chemical Society. 133: 19610-3. PMID 22070432 DOI: 10.1021/ja207963f  0.39
2011 Karns K, Herr AE. Microfluidic homo- and hetero-geneous immunoassays: a tool to accelerate protein biomarker development. Bioanalysis. 3: 2161-5. PMID 21985410 DOI: 10.4155/Bio.11.207  0.793
2011 Karns K, Herr AE. Human tear protein analysis enabled by an alkaline microfluidic homogeneous immunoassay. Analytical Chemistry. 83: 8115-22. PMID 21910436 DOI: 10.1021/Ac202061V  0.805
2011 Chen X, Kapil MA, Hughes AJ, Herr AE. Single-microchannel, multistep assay reports protein size and immunoaffinity. Analytical Chemistry. 83: 6573-9. PMID 21834519 DOI: 10.1021/Ac200982J  0.625
2011 Tia SQ, He M, Kim D, Herr AE. Multianalyte on-chip native Western blotting. Analytical Chemistry. 83: 3581-8. PMID 21456518 DOI: 10.1021/Ac200322Z  0.737
2011 Apori AA, Herr AE. Homogeneous immunosubtraction integrated with sample preparation enabled by a microfluidic format. Analytical Chemistry. 83: 2691-8. PMID 21375345 DOI: 10.1021/ac103219x  0.373
2011 Kim D, Tia SQ, He M, Herr AE. Microfluidic western blotting: Cationic surfactant based protein sizing integrated with electrostatic immobilization Proceedings of the Ieee International Conference On Micro Electro Mechanical Systems (Mems). 197-200. DOI: 10.1109/MEMSYS.2011.5734395  0.737
2011 Pruitt BL, Herr AE. MEMS in biology and medicine Journal of Micromechanics and Microengineering. 21. DOI: 10.1088/0960-1317/21/5/050201  0.471
2011 Hou C, Herr AE. On-chip western blotting: In-situ renaturation of SDS-protein complexes unifies sodium dodecyl sulfate (SDS) sizing & blotting in one microdevice 15th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2011, Microtas 2011. 3: 1603-1605.  0.506
2011 Hughes AJ, Herr AE. Photo-clickable separation gels enable targeted proteomics of cancer biomarker isoforms: A 'single channel, multi-stage' strategy 15th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2011, Microtas 2011. 3: 2074-2076.  0.577
2010 He M, Herr AE. Automated microfluidic protein immunoblotting. Nature Protocols. 5: 1844-56. PMID 21030959 DOI: 10.1038/nprot.2010.142  0.361
2010 Hughes AJ, Herr AE. Quantitative enzyme activity determination with zeptomole sensitivity by microfluidic gradient-gel zymography. Analytical Chemistry. 82: 3803-11. PMID 20353191 DOI: 10.1021/Ac100201Z  0.588
2010 Hou C, Herr AE. Ultrashort separation length homogeneous electrophoretic immunoassays using on-chip discontinuous polyacrylamide gels. Analytical Chemistry. 82: 3343-51. PMID 20334346 DOI: 10.1021/Ac100182J  0.552
2010 He M, Herr AE. Polyacrylamide gel photopatterning enables automated protein immunoblotting in a two-dimensional microdevice. Journal of the American Chemical Society. 132: 2512-3. PMID 20131779 DOI: 10.1021/ja910164d  0.347
2010 Hou C, Karns K, Herr AE. Integrated diagnostics for rapid quantitation of biomarkers in human fluids Proceedings of the Asme 1st Global Congress On Nanoengineering For Medicine and Biology 2010, Nemb2010. 129-130.  0.511
2010 Tia SQ, He M, Kim D, Herr AE. On-chip multi-analyte native western blotting in two minutes 14th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2010, Microtas 2010. 2: 731-733.  0.717
2010 Apori AA, Herr AE. Assessing the traumatic brain injury markers S100 and C-reactive protein in human cerebrospinal fluid via microfluidic immunosubtraction 14th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2010, Microtas 2010. 3: 2056-2058.  0.328
2009 He M, Herr AE. Microfluidic polyacrylamide gel electrophoresis with in situ immunoblotting for native protein analysis. Analytical Chemistry. 81: 8177-84. PMID 19731927 DOI: 10.1021/ac901392u  0.368
2009 Tia S, Herr AE. On-chip technologies for multidimensional separations. Lab On a Chip. 9: 2524-36. PMID 19680577 DOI: 10.1039/B900683B  0.69
2009 Hou C, Herr AE. Multiplexed analysis of inflammation biomarkers using spectrallyencoded on-chip electrophoresis Transducers 2009 - 15th International Conference On Solid-State Sensors, Actuators and Microsystems. 1574-1577. DOI: 10.1109/SENSOR.2009.5285788  0.516
2008 Hou C, Herr AE. Clinically relevant advances in on-chip affinity-based electrophoresis and electrochromatography. Electrophoresis. 29: 3306-19. PMID 18702056 DOI: 10.1002/Elps.200800244  0.543
2008 Lo CT, Throckmorton DJ, Singh AK, Herr AE. Photopolymerized diffusion-defined polyacrylamide gradient gels for on-chip protein sizing. Lab On a Chip. 8: 1273-9. PMID 18651068 DOI: 10.1039/B804485F  0.333
2008 Herr AE. The biomarker pipeline: Novel microfluidic instrumentation for advancing proteomic discovery to clinical diagnostics 2007 Ieee/Nih Life Science Systems and Applications Workshop, Lisa. 5-8. DOI: 10.1109/LSSA.2007.4400871  0.384
2008 Apori A, Herr AE. Integrated fluorescence-labeling and polyacrylamide gel electrophoresis for analysis of protein isoforms 12th International Conference On Miniaturized Systems For Chemistry and Life Sciences - the Proceedings of Microtas 2008 Conference. 15-17.  0.332
2006 Hatch AV, Herr AE, Throckmorton DJ, Brennan JS, Singh AK. Integrated preconcentration SDS-PAGE of proteins in microchips using photopatterned cross-linked polyacrylamide gels. Analytical Chemistry. 78: 4976-84. PMID 16841920 DOI: 10.1021/ac0600454  0.312
2005 Herr AE, Throckmorton DJ, Davenport AA, Singh AK. On-chip native gel electrophoresis-based immunoassays for tetanus antibody and toxin. Analytical Chemistry. 77: 585-90. PMID 15649057 DOI: 10.1021/ac0489768  0.302
2005 Herr AE, Throckmorton DJ, Singh AK. Electrophqretic immunoassays for oral diagnostics 2005 3rd Ieee/Embs Special Topic Conference On Microtechnology in Medicine and Biology. 2005: 53-55. DOI: 10.1109/MMB.2005.1548382  0.355
2005 Hatch AV, Herr AE, Throckmorton DJ, Brennan JP, Giannobile WV, Singh AK. On-chip preconcentration of proteins for picomolar detection in oral fluids Micro Total Analysis Systems - Proceedings of Microtas 2005 Conference: 9th International Conference On Miniaturized Systems For Chemistry and Life Sciences. 1: 1042-1044.  0.303
2004 Herr AE, Singh AK. Photopolymerized cross-linked polyacrylamide gels for on-chip protein sizing. Analytical Chemistry. 76: 4727-33. PMID 15307783 DOI: 10.1021/ac049686u  0.335
2003 Herr AE, Molho JI, Drouvalakis KA, Mikkelsen JC, Utz PJ, Santiago JG, Kenny TW. On-chip coupling of isoelectric focusing and free solution electrophoresis for multidimensional separations. Analytical Chemistry. 75: 1180-7. PMID 12641239 DOI: 10.1021/Ac026239A  0.783
2001 Molho JI, Herr AE, Mosier BP, Santiago JG, Kenny TW, Brennen RA, Gordon GB, Mohammadi B. Optimization of turn geometries for microchip electrophoresis Analytical Chemistry. 73: 1350-1360. DOI: 10.1021/Ac001127+  0.767
2000 Herr AE, Molho JI, Santiago JG, Mungal MG, Kenny TW, Garguilo MG. Electroosmotic capillary flow with nonuniform zeta potential Analytical Chemistry. 72: 1053-7. PMID 10739211 DOI: 10.1021/ac990489i  0.774
1998 Deshpande M, Ghaddar C, Gilbert JR, John PMS, Woudenberg T, Connell C, Molho J, Herr A, Mungal G, Kenny T. Numerical framework for the modeling of electrokinetic flows Proceedings of Spie - the International Society For Optical Engineering. 3515: 217-227. DOI: 10.1117/12.322088  0.773
1998 Molho JI, Herr AE, Kenny TW, Mungal MG, Deshpande M, Gilbert JR, Garguilo MG, Paul PH, St. John PM, Woudenberg TM, Connell C. Fluid transport mechanisms in microfluidic devices American Society of Mechanical Engineers, Dynamic Systems and Control Division (Publication) Dsc. 66: 69-76.  0.756
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