Nathan J. Baird, Ph.D.

Affiliations: 
2007 University of Chicago, Chicago, IL 
Area:
studies of protein and RNA folding, function and design
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Parents

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Tobin R. Sosnick grad student 2007 Chicago
 (Structural insights into RNA folding and stability.)
James Inglese post-doc 2013-2014 NIH, NCATS (Neurotree)
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Publications

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Mwangi MN, Baird NJ. (2024) Templated 3' terminal fluorescent labeling of RNA using Klenow DNA polymerase. Methodsx. 13: 102925
Mwangi MN, Yonkunas MJ, Ageeli AA, et al. (2024) A Newly Identified Peripheral Duplex Anchors and Stabilizes the MALAT1 Triplex. Biochemistry
Swain M, Ageeli AA, Kasprzak WK, et al. (2021) Dynamic bulge nucleotides in the KSHV PAN ENE triple helix provide a unique binding platform for small molecule ligands. Nucleic Acids Research
McGovern-Gooch KR, Baird NJ. (2019) Fluorescence-based investigations of RNA-small molecule interactions. Methods (San Diego, Calif.)
Yonkunas MJ, Baird NJ. (2019) A highly ordered, non-protective MALAT1 ENE structure is adopted prior to triplex formation. Rna (New York, N.Y.)
Abulwerdi FA, Xu W, Ageeli AA, et al. (2019) Selective small molecule targeting of a triple helix encoded by the long non-coding RNA, MALAT1. Acs Chemical Biology
Ageeli AA, McGovern-Gooch KR, Kaminska MM, et al. (2018) Finely tuned conformational dynamics regulate the protective function of the lncRNA MALAT1 triple helix. Nucleic Acids Research
Yonkunas M, Baird N. (2018) Enhanced Sampling of LNCRNA Conformational Space for Defining Ensembles of Structures Used in Ensemble Docking and Virtual Screening of RNA-Focused Small Molecules Biophysical Journal. 114: 435a
Yu H, Dranchak P, Li Z, et al. (2017) Macrocycle peptides delineate locked-open inhibition mechanism for microorganism phosphoglycerate mutases. Nature Communications. 8: 14932
Baird NJ, Inglese J, Ferré-D'Amaré AR. (2015) Rapid RNA-ligand interaction analysis through high-information content conformational and stability landscapes. Nature Communications. 6: 8898
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