John M. Word, Ph.D.

Affiliations: 
2000 Duke University, Durham, NC 
Area:
3D structures of proteins
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"John Word"
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David C. Richardson grad student 2000 Duke
 (All-atom small-probe contact surface analysis: An information-rich description of molecular goodness -of -fit.)
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Publications

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Lovell SC, Davis IW, Arendall WB, et al. (2003) Structure validation by Calpha geometry: phi,psi and Cbeta deviation. Proteins. 50: 437-50
Word JM, Bateman RC, Presley BK, et al. (2000) Exploring steric constraints on protein mutations using MAGE/PROBE. Protein Science : a Publication of the Protein Society. 9: 2251-9
Lovell SC, Word JM, Richardson JS, et al. (2000) The penultimate rotamer library. Proteins. 40: 389-408
Word JM, Lovell SC, Richardson JS, et al. (1999) Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation. Journal of Molecular Biology. 285: 1735-47
Word JM, Lovell SC, LaBean TH, et al. (1999) Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms. Journal of Molecular Biology. 285: 1711-33
Lovell SC, Word JM, Richardson JS, et al. (1999) Asparagine and glutamine rotamers: B-factor cutoff and correction of amide flips yield distinct clustering. Proceedings of the National Academy of Sciences of the United States of America. 96: 400-5
Xu RX, Word JM, Davis DG, et al. (1995) Solution structure of the human pp60c-src SH2 domain complexed with a phosphorylated tyrosine pentapeptide. Biochemistry. 34: 2107-21
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