David C. Richardson
Affiliations: | Biochemistry | Duke University, Durham, NC |
Area:
3D structures of proteinsWebsite:
http://www.biochem.duke.edu/modules/biochem_richard_lab/index.php?id=1Google:
"David C. Richardson"Bio:
http://dx.doi.org/10.1074/jbc.O111.000223
Mean distance: 7.57 | S | N | B | C | P |
Parents
Sign in to add mentor| F. Albert Cotton | grad student | 1967 | MIT | |
| (Structural studies of coordination compounds and enzymes including a study of micrococcal nuclease at 6 Å resolution) | ||||
Children
Sign in to add trainee| John Tainer | grad student | ||
| Elizabeth D. Getzoff | grad student | 1982 | Duke |
| John M. Word | grad student | 2000 | Duke |
| Laura W. Murray | grad student | 2007 | Duke |
| Jeremy N. Block | grad student | 2010 | Duke |
| Daniel A. Keedy | grad student | 2012 | Duke |
| Gary Kapral | grad student | 2013 | Duke |
| Michael H. Hecht | post-doc | 1990 | Duke University Medical School |
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Publications
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| Richardson JS, Williams CJ, Chen VB, et al. (2023) The bad and the good of trends in model building and refinement for sparse-data regions: pernicious forms of overfitting versus good new tools and predictions. Acta Crystallographica. Section D, Structural Biology |
| Williams CJ, Richardson DC, Richardson JS. (2021) The importance of residue-level filtering and the Top2018 best-parts dataset of high-quality protein residues. Protein Science : a Publication of the Protein Society |
| Richardson JS, Richardson DC, Goodsell DS. (2021) Seeing the PDB. The Journal of Biological Chemistry. 100742 |
| Croll TI, Williams CJ, Chen VB, et al. (2021) Improving SARS-CoV-2 Structures: Peer Review by Early Coordinate Release. Biophysical Journal |
| Prisant MG, Williams CJ, Chen VB, et al. (2019) New Tools in MolProbity Validation: CaBLAM for CryoEM Backbone, UnDowser to Rethink "Waters", and NGL Viewer to Recapture Online 3D Graphics. Protein Science : a Publication of the Protein Society |
| Liebschner D, Afonine PV, Baker ML, et al. (2019) Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix. Acta Crystallographica. Section D, Structural Biology. 75: 861-877 |
| Williams C, Richardson DC, Richardson JS. (2019) A database of high-quality protein residues for reference data, library construction and motif analysis Acta Crystallographica Section a Foundations and Advances. 75: a437-a437 |
| Richardson JS, Williams CJ, Videau LL, et al. (2018) Assessment of detailed conformations suggests strategies for improving cryoEM models: Helix at lower resolution, ensembles, pre-refinement fixups, and validation at multi-residue length scale. Journal of Structural Biology |
| Richardson JS, Williams CJ, Hintze BJ, et al. (2018) Model validation: local diagnosis, correction and when to quit. Acta Crystallographica. Section D, Structural Biology. 74: 132-142 |
| Richardson JS, Williams CJ, Videau LL, et al. (2018) Molecular therapy for 2.5–4 Å models: anecdotes and progress from the Cryo-EM Model Challenge Acta Crystallographica Section a Foundations and Advances. 74: a298-a298 |