Alan A. Chen, Ph.D.
Affiliations: | 2009 | Washington University, Saint Louis, St. Louis, MO |
Area:
General Biophysics, Physical Chemistry, BiochemistryGoogle:
"Alan Chen"Parents
Sign in to add mentor| Rohit V. Pappu | grad student | 2009 | Washington University | |
| (Non-idealities of strong 1:1 electrolytes and the mechanism of counterion specificity in a RNA kissing -loop complex.) | ||||
| Angel E. Garcia | post-doc | 2009-2013 | RPI | |
Children
Sign in to add trainee| Srivathsan Vembanur Ranganathan | post-doc | 2014-2015 | SUNY Albany (Chemistry Tree) |
| Paul M. Gasper | post-doc | 2014-2017 | SUNY Albany (Chemistry Tree) |
BETA: Related publications
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Publications
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| Nowzari ZR, Hale M, Ellis J, et al. (2024) Mutation of two intronic nucleotides alters RNA structure and dynamics inhibiting MBNL1 and RBFOX1 regulated splicing of the Insulin Receptor. Biorxiv : the Preprint Server For Biology |
| Hertz LM, White EN, Kuznedelov K, et al. (2023) The Effect of Pseudoknot Base Pairing on Cotranscriptional Structural Switching of the Fluoride Riboswitch. Biorxiv : the Preprint Server For Biology |
| Viegas RG, Sanches MN, Chen AA, et al. (2023) Characterizing the Folding Transition-State Ensembles in the Energy Landscape of an RNA Tetraloop. Journal of Chemical Information and Modeling |
| Abraham Punnoose J, Thomas KJ, Chandrasekaran AR, et al. (2023) High-throughput single-molecule quantification of individual base stacking energies in nucleic acids. Nature Communications. 14: 631 |
| Mathivanan J, Bai Z, Chen A, et al. (2022) Design, Synthesis, and Characterization of a Novel 2'-5'-Linked Amikacin-Binding Aptamer: An Experimental and MD Simulation Study. Acs Chemical Biology. 17: 3478-3488 |
| Cheng L, White EN, Brandt NL, et al. (2022) Cotranscriptional RNA strand exchange underlies the gene regulation mechanism in a purine-sensing transcriptional riboswitch. Nucleic Acids Research |
| D'Esposito RJ, Myers CA, Chen AA, et al. (2022) Challenges with Simulating Modified RNA: Insights into Role and Reciprocity of Experimental and Computational Approaches. Genes. 13 |
| Yu AM, Gasper PM, Cheng L, et al. (2021) Computationally reconstructing cotranscriptional RNA folding from experimental data reveals rearrangement of non-native folding intermediates. Molecular Cell |
| Haruehanroengra P, Vangaveti S, Ranganathan SV, et al. (2020) Terpene Chain Length Affects the Base Pairing Discrimination of -geranyl-2-thiouridine in RNA Duplex. Iscience. 23: 101866 |
| Chandrasekaran AR, Mathivanan J, Ebrahimi P, et al. (2020) Hybrid DNA/RNA nanostructures with 2'-5' linkages. Nanoscale |