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Dmitrii E. Makarov

Affiliations: 
University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Molecular Biology, Biochemistry
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Parents

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V. A. Benderskii grad student 1990-1992 Institute of Chemical Physics
Nancy Makri post-doc 1993-1996 UIUC
Horia Metiu post-doc 1996-2000 UC Santa Barbara

Children

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Kil H. Eom grad student 2005 UT Austin
Pai-Chi Li grad student 2006 UT Austin
Serdal Kirmizialtin grad student 2007 UT Austin
Ryan R Cheng grad student 2007-2012 UT Austin
Atanu Das post-doc 2013-2018 UT Austin

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Publications

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Song K, Park R, Das A, et al. (2023) Non-Markov models of single-molecule dynamics from information-theoretical analysis of trajectories. The Journal of Chemical Physics. 159
Makarov DE, Berezhkovskii A, Haran G, et al. (2022) The Effect of Time Resolution on Apparent Transition Path Times Observed in Single-Molecule Studies of Biomolecules. The Journal of Physical Chemistry. B
Satija R, Berezhkovskii AM, Makarov DE. (2020) Broad distributions of transition-path times are fingerprints of multidimensionality of the underlying free energy landscapes. Proceedings of the National Academy of Sciences of the United States of America
Ma P, Elber R, Makarov DE. (2020) The value of temporal information when analyzing reaction coordinates. Journal of Chemical Theory and Computation
Satija R, Das A, Mühle S, et al. (2020) Kinetics of Loop Closure in Disordered Proteins: Theory vs Simulations vs Experiments. The Journal of Physical Chemistry. B
Berezhkovskii AM, Makarov DE. (2020) From Nonequilibrium Single-Molecules Trajectories to Underlying Dynamics. The Journal of Physical Chemistry Letters
Ozmaian M, Makarov DE. (2019) Transition path dynamics in the binding of intrinsically disordered proteins: A simulation study. The Journal of Chemical Physics. 151: 235101
Copperman J, Aristoff D, Makarov DE, et al. (2019) Transient probability currents provide upper and lower bounds on non-equilibrium steady-state currents in the Smoluchowski picture. The Journal of Chemical Physics. 151: 174108
Renn JP, Bhattacharyya S, Bai H, et al. (2019) Mechanical unfolding of spectrin reveals a super-exponential dependence of unfolding rate on force. Scientific Reports. 9: 11101
Satija R, Makarov DE. (2019) Generalized Langevin Equation as a Model for Barrier Crossing Dynamics in Biomolecular Folding. The Journal of Physical Chemistry. B. 123: 802-810
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