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Brian N. Dominy

Affiliations: 
Chemistry Clemson University, Clemson, SC, United States 
Area:
Biochemistry, General Biophysics, Physical Chemistry
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"Brian Dominy"
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Parents

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Charles L. Brooks grad student Scripps Institute
Eugene I. Shakhnovich post-doc Harvard

Children

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Manoj K. Singh grad student 2010 Clemson University
Allyn R. Brice grad student 2011 Clemson University
Mihir S. Date grad student 2012 Clemson University

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Publications

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Jia Z, Ackroyd C, Han T, et al. (2017) Effects from metal ion in tumor endothelial marker 8 and anthrax protective antigen: BioLayer Interferometry experiment and molecular dynamics simulation study. Journal of Computational Chemistry. 38: 1183-1190
Xia B, Liu Y, Guevara J, et al. (2017) Correlated Mutation in the Evolution of Catalysis in Uracil DNA Glycosylase Superfamily. Scientific Reports. 7: 45978
Lee DH, Liu Y, Lee HW, et al. (2015) A structural determinant in the uracil DNA glycosylase superfamily for the removal of uracil from adenine/uracil base pairs. Nucleic Acids Research. 43: 1081-9
Xia B, Liu Y, Li W, et al. (2014) Specificity and catalytic mechanism in family 5 uracil DNA glycosylase. The Journal of Biological Chemistry. 289: 18413-26
Date MS, Dominy BN. (2013) Modeling the influence of salt on the hydrophobic effect and protein fold stability Communications in Computational Physics. 13: 90-106
Brice AR, Dominy BN. (2013) Examining electrostatic influences on base-flipping: A comparison of TIP3P and GB solvent models Communications in Computational Physics. 13: 223-237
Singh MK, Dominy BN. (2012) The evolution of cefotaximase activity in the TEM β-lactamase. Journal of Molecular Biology. 415: 205-20
Lee HW, Dominy BN, Cao W. (2011) New family of deamination repair enzymes in uracil-DNA glycosylase superfamily. The Journal of Biological Chemistry. 286: 31282-7
Singh MK, Streu K, McCrone AJ, et al. (2011) The evolution of catalytic function in the HIV-1 protease. Journal of Molecular Biology. 408: 792-805
Brice AR, Dominy BN. (2011) Analyzing the robustness of the MM/PBSA free energy calculation method: application to DNA conformational transitions. Journal of Computational Chemistry. 32: 1431-40
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