Charles L. Brooks, III
Affiliations: | University of Michigan, Ann Arbor, Ann Arbor, MI |
Area:
computational biophysicsWebsite:
https://lsa.umich.edu/chem/people/faculty/brookscl.htmlGoogle:
"Charles L. Brooks III"Bio:
http://brooks.chem.lsa.umich.edu/index.php?page=charles_l._brooks_iii&subdir=articles/group
http://scholar.google.com/citations?user=XWNjq2AAAAAJ&hl=en
Mean distance: 7.62 | S | N | B | C | P |
Cross-listing: MichiganTree
Parents
Sign in to add mentor| Steven A. Adelman | grad student | 1982 | Purdue |
| Martin Karplus | post-doc | 1982-1985 | Harvard |
Children
Sign in to add trainee| Michael J. Robertson | research assistant | 2010-2012 | University of Michigan (Cell Biology Tree) |
| Brian N. Dominy | grad student | Scripps Institute | |
| Teresa Head-Gordon | grad student | 1984-1989 | Carnegie Mellon |
| Douglas James Tobias | grad student | 1991 | Carnegie Mellon |
| John Karanicolas | grad student | 2003 | Scripps Institute (Computational Biology Tree) |
| Olgun Guvench | grad student | 2005 | Scripps Institute |
| Aaron T. Frank | post-doc | University of Michigan | |
| Jinhyuk Lee | post-doc | KRIBB | |
| Freddie R. Salsbury | post-doc | Scripps Institute | |
| Sean M. Law | post-doc | 2011- | University of Michigan |
| Hedieh Torabifard | post-doc | 2017- | University of Michigan |
| Joan-Emma Shea | post-doc | 1997-2000 | Scripps Research Institute |
| Michael Feig | post-doc | 1999-2003 | Scripps Institute |
| Florence Tama | post-doc | 2000-2005 | Scripps Research Institute (Microtree) |
| Jana Shen | post-doc | 2003-2007 | Scripps Research Institute |
| Ilja V. Khavrutskii | post-doc | 2004-2007 | The Scripps Research Institute, La Jolla, CA |
Collaborators
Sign in to add collaborator| Ayyalusamy Ramamoorthy | collaborator | University of Michigan |
BETA: Related publications
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Publications
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| Brooks CL, Case DA, Plimpton S, et al. (2021) Classical molecular dynamics. The Journal of Chemical Physics. 154: 100401 |
| Paul TJ, Vilseck JZ, Hayes RL, et al. (2020) Exploring pH Dependent Host/Guest Binding Affinities. The Journal of Physical Chemistry. B |
| Ding X, Wu Y, Wang Y, et al. (2020) Accelerated CDOCKER with GPUs, parallel simulated annealing and fast Fourier transforms. Journal of Chemical Theory and Computation |
| Torabifard H, Panahi A, Brooks CL. (2020) M2 amphipathic helices facilitate pH-dependent conformational transition in influenza A virus. Proceedings of the National Academy of Sciences of the United States of America |
| Wang Y, Brooks CL. (2020) Electrostatic Forces Control the Negative Allosteric Regulation in a Disordered Protein Switch. The Journal of Physical Chemistry Letters |
| Gong X, Chiricotto M, Liu X, et al. (2019) Accelerating the Generalized Born with Molecular Volume and Solvent Accessible Surface Area Implicit Solvent Model Using Graphics Processing Units. Journal of Computational Chemistry |
| Wang Y, Brooks CL. (2019) Enhanced Sampling Applied to Modeling Allosteric Regulation in Transcription. The Journal of Physical Chemistry Letters |
| Vilseck JZ, Sohail N, Hayes RL, et al. (2019) Overcoming Challenging Substituent Perturbations with Multisite λ-Dynamics: A Case Study Targeting β-Secretase 1. The Journal of Physical Chemistry Letters |
| Halloran KT, Wang Y, Arora K, et al. (2019) Frustration and folding of a TIM barrel protein. Proceedings of the National Academy of Sciences of the United States of America |
| Ding X, Vilseck JZ, Brooks CL. (2019) A Fast Solver for Large Scale Multistate Bennett Acceptance Ratio Equations. Journal of Chemical Theory and Computation |