David L. Beveridge, PhD
Affiliations: | Wesleyan University, Middletown, CT, United States | ||
1968-1986 | City University of New York, New York, NY, United States |
Area:
Theoretical and computational chemistryWebsite:
http://www.wesleyan.edu/molbiophys/Faculty/Beveridge/beveridge.cv.htmGoogle:
"David L. Beveridge"Mean distance: 8.38 | S | N | B | C | P |
Parents
Sign in to add mentorHans H. Jaffé | grad student | 1965 | University of Cincinnati |
Odilon Chalvet | post-doc | 1965-1966 | Centre de Mécanique Ondulatoire Appliquée |
John Anthony Pople | post-doc | 1966-1968 | Carnegie Mellon |
Children
Sign in to add traineeB. Jayaram | grad student | 1982-1986 | CUNY |
Yongxing Liu | grad student | 2001 | Wesleyan |
Kevin John McConnell | grad student | 2002 | Wesleyan |
Kelly Marie Thayer | grad student | 2004 | Wesleyan |
Sergei Y. Ponomarev | grad student | 2007 | Wesleyan |
David C. Kombo | post-doc | 1999-2002 | Wesleyan |
Bethany L. Kormos | post-doc | 2004-2008 | Wesleyan |
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Publications
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Jayaraj A, Thayer KM, Beveridge DL, et al. (2023) Molecular Dynamics of Mismatch Detection - How MutS Uses Indirect Readout to Find Errors in DNA. Biophysical Journal |
Cowan BS, Beveridge DL, Thayer KM. (2023) Allosteric Signaling in PDZ Energetic Networks: Embedding Error Analysis. The Journal of Physical Chemistry. B |
Jasuja R, Spencer D, Jayaraj A, et al. (2021) Estradiol induces allosteric coupling and partitioning of sex-hormone-binding globulin monomers among conformational states. Iscience. 24: 102414 |
Lakhani B, Thayer KM, Black E, et al. (2019) Spectral analysis of molecular dynamics simulations on PDZ: MD sectors. Journal of Biomolecular Structure & Dynamics. 1-10 |
Mishra A, Siwach P, Misra P, et al. (2018) Toward a Universal Structural and Energetic Model for Prokaryotic Promoters. Biophysical Journal |
Thayer KM, Lakhani B, Beveridge DL. (2017) A Molecular Dynamics-Markov State Model of Protein Ligand Binding and Allostery in CRIB-PDZ: Conformational Selection and Induced Fit. The Journal of Physical Chemistry. B |
Lakhani B, Thayer KM, Hingorani MM, et al. (2017) Evolutionary Covariance Combined with Molecular Dynamics Predicts a Framework for Allostery in the MutS DNA Mismatch Repair Protein. The Journal of Physical Chemistry. B |
Lakhani B, Black E, Beveridge DL. (2015) 56 Molecular dynamics simulation studies of protein sectors: motional correlations. Journal of Biomolecular Structure & Dynamics. 33: 38 |
Pasi M, Maddocks JH, Beveridge D, et al. (2014) μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA. Nucleic Acids Research. 42: 12272-83 |
Khandelwal G, Lee RA, Jayaram B, et al. (2014) A statistical thermodynamic model for investigating the stability of DNA sequences from oligonucleotides to genomes. Biophysical Journal. 106: 2465-73 |