Ronit Nir, Ph.D.

Affiliations: 
2010 Molecular Genetics Weizmann Institute of Science, Rehovot, Israel 
Area:
Molecular Biology, Bioinformatics Biology
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"Ronit Nir"
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Talila Volk grad student 2010 Weizmann Institute
 (Regulation of the Drosophila RNA binding protein HOW by MAPK/ERK phosphorylation.)
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Publications

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Zambrano-Mila MS, Witzenberger M, Rosenwasser Z, et al. (2023) Dissecting the basis for differential substrate specificity of ADAR1 and ADAR2. Nature Communications. 14: 8212
Uzonyi A, Dierks D, Nir R, et al. (2022) Exclusion of m6A from splice-site proximal regions by the exon junction complex dictates m6A topologies and mRNA stability. Molecular Cell
Nir R, Hoernes TP, Muramatsu H, et al. (2022) A systematic dissection of determinants and consequences of snoRNA-guided pseudouridylation of human mRNA. Nucleic Acids Research. 50: 4900-4916
Uzonyi A, Nir R, Schwartz S. (2022) Cloning of DNA oligo pools for expression. Star Protocols. 3: 101103
Uzonyi A, Nir R, Shliefer O, et al. (2021) Deciphering the principles of the RNA editing code via large-scale systematic probing. Molecular Cell
Sas-Chen A, Nir R, Schwartz S. (2021) mito-Ψ-Seq: A High-Throughput Method for Systematic Mapping of Pseudouridine Within Mitochondrial RNA. Methods in Molecular Biology (Clifton, N.J.). 2192: 103-115
Sas-Chen A, Thomas JM, Matzov D, et al. (2020) Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping. Nature
Garcia-Campos MA, Edelheit S, Toth U, et al. (2019) Deciphering the "mA Code" via Antibody-Independent Quantitative Profiling. Cell
Weingarten-Gabbay S, Nir R, Lubliner S, et al. (2019) Systematic interrogation of human promoters. Genome Research
Vainberg Slutskin I, Weingarten-Gabbay S, Nir R, et al. (2018) Unraveling the determinants of microRNA mediated regulation using a massively parallel reporter assay. Nature Communications. 9: 529
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