Amedeo Caflisch

Universität Zürich, Zürich, ZH, Switzerland 
"Amedeo Caflisch"

Caflisch, Amedeo. Monte Carlo-docking of polypeptide chains. a general model with applications to oligopeptides bonded to class I MHC proteins. Diss. Naturwiss. ETH Zürich (1991).

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Peter Felix Niederer grad student 1991 ETH Zürich (E-Tree)
 (Monte Carlo-docking of polypeptide chains.)
Martin Karplus post-doc 1992-1994
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Li Y, Bedi RK, Wiedmer L, et al. (2021) Atomistic and Thermodynamic Analysis of N6-Methyladenosine (mA) Recognition by the Reader Domain of YTHDC1. Journal of Chemical Theory and Computation
Milardi D, Gazit E, Radford SE, et al. (2021) Proteostasis of Islet Amyloid Polypeptide: A Molecular Perspective of Risk Factors and Protective Strategies for Type II Diabetes. Chemical Reviews
Unzue A, Jessen-Trefzer C, Spiliotopoulos D, et al. (2020) Understanding the mechanism of action of pyrrolo[3,2-]quinoxaline-derivatives as kinase inhibitors. Rsc Medicinal Chemistry. 11: 665-675
Mallona I, Ilie IM, Karemaker ID, et al. (2020) Flanking sequence preference modulates de novo DNA methylation in the mouse genome. Nucleic Acids Research
Cocina F, Vitalis A, Caflisch A. (2020) SAPPHIRE-based clustering. Journal of Chemical Theory and Computation
Marchand JR, Knehans T, Caflisch A, et al. (2020) An ABSINTH-Based Protocol for Predicting Binding Affinities Between Proteins and Small Molecules. Journal of Chemical Information and Modeling
Dolbois A, Batiste L, Wiedmer L, et al. (2020) Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers. Acs Medicinal Chemistry Letters. 11: 1573-1580
Bedi RK, Huang D, Eberle SA, et al. (2020) Small-molecule inhibitors of METTL3, the major human epitranscriptomic writer. Chemmedchem
Bedi RK, Huang D, Wiedmer L, et al. (2020) Selectively disrupting mA-dependent protein-RNA interactions with fragments. Acs Chemical Biology
Li Y, Bedi RK, Wiedmer L, et al. (2019) Flexible binding of mA reader protein YTHDC1 to its preferred RNA motif. Journal of Chemical Theory and Computation
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