Amedeo Caflisch
Affiliations: | Universität Zürich, Zürich, ZH, Switzerland |
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"Amedeo Caflisch"Bio:
Caflisch, Amedeo. Monte Carlo-docking of polypeptide chains. a general model with applications to oligopeptides bonded to class I MHC proteins. Diss. Naturwiss. ETH Zürich (1991).
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Parents
Sign in to add mentor| Peter Felix Niederer | grad student | 1991 | ETH Zürich (E-Tree) | |
| (Monte Carlo-docking of polypeptide chains.) | ||||
| Martin Karplus | post-doc | 1992-1994 | ||
Children
Sign in to add trainee| Gianluca Interladi | research assistant | Universität Zürich | |
| Marco Cecchini | grad student | University of Zurich, Department of Biochemistry | |
| Jean-Rémy Marchand | grad student | 2013- | (Physics Tree) |
| Peter Kolb | grad student | 2001-2007 | Universität Zürich |
| Andrea Prunotto | grad student | 2005-2009 | Universität Zürich |
| Marino Convertino | grad student | 2007-2011 | University of Zurich, Department of Biochemistry |
| Sabyashachi Mishra | post-doc | 2009-2012 | Universität Zürich |
| Xiang Wang | post-doc | 2019-2021 | University of Zurich (UZH) |
| Ioana Mariuca Ilie | post-doc | 2017-2022 | Universität Zürich (Physics Tree) |
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Publications
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| Ilie IM, Ehrhardt C, Caflisch A, et al. (2023) Decrypting Integrins by Mixed-Solvent Molecular Dynamics Simulations. Journal of Chemical Information and Modeling. 63: 3878-3891 |
| Dehabadi MH, Caflisch A, Ilie IM, et al. (2022) Interactions of Curcumin's Degradation Products with the Aβ Dimer: A Computational Study. The Journal of Physical Chemistry. B |
| Nai F, Nachawati R, Zálešák F, et al. (2022) Fragment Ligands of the mA-RNA Reader YTHDF2. Acs Medicinal Chemistry Letters. 13: 1500-1509 |
| Dalle Vedove A, Cazzanelli G, Batiste L, et al. (2022) Identification of a BAZ2A-Bromodomain Hit Compound by Fragment Growing. Acs Medicinal Chemistry Letters. 13: 1434-1443 |
| Ilie IM, Caflisch A. (2022) Antibody binding increases the flexibility of the prion protein. Biochimica Et Biophysica Acta. Proteins and Proteomics. 140827 |
| Ilie IM, Bacci M, Vitalis A, et al. (2022) Antibody binding modulates the dynamics of the membrane-bound prion protein. Biophysical Journal |
| García-Viñuales S, Ilie IM, Santoro AM, et al. (2022) Silybins inhibit human IAPP amyloid growth and toxicity through stereospecific interactions. Biochimica Et Biophysica Acta. Proteins and Proteomics. 1870: 140772 |
| Nass KJ, Ilie IM, Saller MJ, et al. (2021) The role of the N-terminal amphipathic helix (N-AH) in bacterial YidC: Insights from functional studies, the crystal structure and molecular dynamics simulations. Biochimica Et Biophysica Acta. Biomembranes. 183825 |
| Schilling J, Jost C, Ilie IM, et al. (2021) Thermostable designed ankyrin repeat proteins (DARPins) as building blocks for innovative drugs. The Journal of Biological Chemistry. 101403 |
| Li Y, Bedi RK, Wiedmer L, et al. (2021) Atomistic and Thermodynamic Analysis of N6-Methyladenosine (mA) Recognition by the Reader Domain of YTHDC1. Journal of Chemical Theory and Computation |