Rudesh D Toofanny, Ph.D
Affiliations: | 2002-2006 | Pharmacy | University of Nottingham, Nottingham, England, United Kingdom |
Area:
Biophysics, Biochemistry, Molecular dynamics, Metabolic pathway design, computational biology,bioinformaticsWebsite:
https://scholar.google.com/citations?user=FcV225EAAAAJ&hl=enGoogle:
"Rudesh Toofanny"Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Phillip M. Williams | grad student | 2002-2006 | Nottingham |
| Valerie D. Daggett | post-doc | 2006-2013 | University of Washington |
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Publications
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| Toofanny RD, Calhoun S, Jonsson AL, et al. (2019) Shared unfolding pathways of unrelated immunoglobulin-like β-sandwich proteins. Protein Engineering, Design & Selection : Peds |
| Shannon G, Marples CR, Toofanny RD, et al. (2019) Evolutionary drivers of protein shape. Scientific Reports. 9: 11873 |
| Bromley D, Rysavy SJ, Su R, et al. (2014) DIVE: a data intensive visualization engine. Bioinformatics (Oxford, England). 30: 593-5 |
| Toofanny RD, Daggett V. (2012) Understanding protein unfolding from molecular simulations Wiley Interdisciplinary Reviews: Computational Molecular Science. 2: 405-423 |
| Morrone A, Giri R, Toofanny RD, et al. (2011) GB1 is not a two-state folder: identification and characterization of an on-pathway intermediate. Biophysical Journal. 101: 2053-60 |
| Toofanny RD, Simms AM, Beck DA, et al. (2011) Implementation of 3D spatial indexing and compression in a large-scale molecular dynamics simulation database for rapid atomic contact detection. Bmc Bioinformatics. 12: 334 |
| Toofanny RD, Jonsson AL, Daggett V. (2010) A comprehensive multidimensional-embedded, one-dimensional reaction coordinate for protein unfolding/folding. Biophysical Journal. 98: 2671-81 |
| van der Kamp MW, Schaeffer RD, Jonsson AL, et al. (2010) Dynameomics: a comprehensive database of protein dynamics. Structure (London, England : 1993). 18: 423-35 |
| Toofanny RD, Cortajarena AL, Regan L, et al. (2010) Molecular Dynamics Simulations of Consensus Tetratricopeptide Repeat Proteins Biophysical Journal. 98: 636a-637a |
| Beck DA, Jonsson AL, Schaeffer RD, et al. (2008) Dynameomics: mass annotation of protein dynamics and unfolding in water by high-throughput atomistic molecular dynamics simulations. Protein Engineering, Design & Selection : Peds. 21: 353-68 |