Sirui Liu
Affiliations: | 2019- | FAS | Harvard University, Cambridge, MA, United States |
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Publications
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Zhang J, Liu S, Chen M, et al. (2023) Unsupervisedly Prompting AlphaFold2 for Accurate Few-Shot Protein Structure Prediction. Journal of Chemical Theory and Computation |
Pavlopoulos GA, Baltoumas FA, Liu S, et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature. 622: 594-602 |
Baltoumas FA, Karatzas E, Liu S, et al. (2023) NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes. Nucleic Acids Research |
Norn C, Wicky BIM, Juergens D, et al. (2021) Protein sequence design by conformational landscape optimization. Proceedings of the National Academy of Sciences of the United States of America. 118 |
Agbleke AA, Amitai A, Buenrostro JD, et al. (2020) Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields. Molecular Cell |
Quan H, Yang Y, Liu S, et al. (2019) Chromatin structure changes during various processes from a DNA sequence view. Current Opinion in Structural Biology. 62: 1-8 |
Liu S, Zhang L, Quan H, et al. (2018) From 1D sequence to 3D chromatin dynamics and cellular functions: a phase separation perspective. Nucleic Acids Research |