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Florian David Schubot - Publications

Affiliations: 
Virginia Polytechnic Institute and State University, Blacksburg, VA, United States 
 2000 University of Georgia, Athens, Athens, GA, United States 
Website:
http://www.biol.vt.edu/faculty/schubot/
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36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Salar S, Ball NE, Baaziz H, Nix JC, Sobe RC, Compton KK, Zhulin IB, Brown AM, Scharf BE, Schubot FD. The structural analysis of the periplasmic domain of Sinorhizobium meliloti chemoreceptor McpZ reveals a novel fold and suggests a complex mechanism of transmembrane signaling. Proteins. PMID 37213073 DOI: 10.1002/prot.26510  0.321
2020 Shrestha M, Bernhards RC, Fu Y, Ryan K, Schubot FD. Backbone Interactions Between Transcriptional Activator ExsA and Anti-Activator ExsD Facilitate Regulation of the Type III Secretion System in Pseudomonas aeruginosa. Scientific Reports. 10: 9881. PMID 32555263 DOI: 10.1038/S41598-020-66555-Z  0.364
2018 Shrestha M, Compton KK, Mancl J, Webb B, Brown A, Scharf B, Schubot FD. Structure of the sensory domain of McpX from the first known bacterial chemotactic sensor for quaternary ammonium compounds. The Biochemical Journal. PMID 30442721 DOI: 10.1042/BCJ20180769  0.316
2018 Shrestha M, Compton KK, Mancl JM, Webb BA, Brown AM, Scharf BE, Schubot FD. Structure of the sensory domain of McpX fromSinorhizobium meliloti, the first known bacterial chemotactic sensor for quaternary ammonium compounds. Biochemical Journal. 475: 3949-3962. DOI: 10.2210/Pdb6D8V/Pdb  0.41
2017 Black WP, Wang L, Jing X, Saldaña RC, Li F, Scharf BE, Schubot FD, Yang Z. The type IV pilus assembly ATPase PilB functions as a signaling protein to regulate exopolysaccharide production in Myxococcus xanthus. Scientific Reports. 7: 7263. PMID 28779124 DOI: 10.1038/S41598-017-07594-X  0.339
2016 Mancl JM, Black WP, Robinson H, Yang Z, Schubot FD. Crystal Structure of a Type IV Pilus Assembly ATPase: Insights into the Molecular Mechanism of PilB from Thermus thermophilus. Structure (London, England : 1993). PMID 27667690 DOI: 10.1016/J.Str.2016.08.010  0.406
2015 Shrestha M, Xiao Y, Robinson H, Schubot FD. Structural Analysis of the Regulatory Domain of ExsA, a Key Transcriptional Regulator of the Type Three Secretion System in Pseudomonas aeruginosa. Plos One. 10: e0136533. PMID 26317977 DOI: 10.1371/Journal.Pone.0136533  0.453
2014 Marsden AE, Schubot FD, Yahr TL. Self-association is required for occupation of adjacent binding sites in Pseudomonas aeruginosa type III secretion system promoters. Journal of Bacteriology. 196: 3546-55. PMID 25070741 DOI: 10.1128/Jb.01969-14  0.321
2014 Bernhards R, Yi X, Shrestha M, Schubot F. Regulation of Pseudomonas aeruginosa virulence by the ExsACDE Signaling Cascade Acta Crystallographica Section a Foundations and Advances. 70: C1393-C1393. DOI: 10.1107/S2053273314086069  0.478
2013 Dalal S, Ragheb DR, Schubot FD, Klemba M. A naturally variable residue in the S1 subsite of M1 family aminopeptidases modulates catalytic properties and promotes functional specialization. The Journal of Biological Chemistry. 288: 26004-12. PMID 23897806 DOI: 10.1074/Jbc.M113.465625  0.319
2013 Bernhards RC, Marsden AE, Esher SK, Yahr TL, Schubot FD. Self-trimerization of ExsD limits inhibition of the Pseudomonas aeruginosa transcriptional activator ExsA in vitro. The Febs Journal. 280: 1084-94. PMID 23279839 DOI: 10.1111/Febs.12103  0.368
2012 Jing X, Robinson HR, Heffron JD, Popham DL, Schubot FD. The catalytic domain of the germination-specific lytic transglycosylase SleB from Bacillus anthracis displays a unique active site topology. Proteins. 80: 2469-75. PMID 22777830 DOI: 10.1002/Prot.24140  0.426
2012 King JM, Brutinel ED, Marsden AE, Schubot FD, Yahr TL. Orientation of Pseudomonas aeruginosa ExsA monomers bound to promoter DNA and base-specific contacts with the P(exoT) promoter. Journal of Bacteriology. 194: 2573-85. PMID 22408167 DOI: 10.1128/Jb.00107-12  0.335
2010 Black WP, Schubot FD, Li Z, Yang Z. Phosphorylation and dephosphorylation among Dif chemosensory proteins essential for exopolysaccharide regulation in Myxococcus xanthus. Journal of Bacteriology. 192: 4267-74. PMID 20543066 DOI: 10.1128/Jb.00403-10  0.313
2010 Vogelaar NJ, Jing X, Robinson HH, Schubot FD. Analysis of the crystal structure of the ExsC.ExsE complex reveals distinctive binding interactions of the Pseudomonas aeruginosa type III secretion chaperone ExsC with ExsE and ExsD. Biochemistry. 49: 5870-9. PMID 20536183 DOI: 10.1021/Bi100432E  0.485
2010 Jing X, Jaw J, Robinson HH, Schubot FD. Crystal structure and oligomeric state of the RetS signaling kinase sensory domain. Proteins. 78: 1631-40. PMID 20112417 DOI: 10.1002/Prot.22679  0.408
2009 Bernhards RC, Jing X, Vogelaar NJ, Robinson H, Schubot FD. Structural evidence suggests that antiactivator ExsD from Pseudomonas aeruginosa is a DNA binding protein. Protein Science : a Publication of the Protein Society. 18: 503-13. PMID 19235906 DOI: 10.1002/Pro.48  0.422
2007 Sun P, Austin BP, Schubot FD, Waugh DS. New protein fold revealed by a 1.65 A resolution crystal structure of Francisella tularensis pathogenicity island protein IglC. Protein Science : a Publication of the Protein Society. 16: 2560-3. PMID 17905833 DOI: 10.1110/Ps.073177307  0.387
2007 Cacciapuoti G, Porcelli M, Moretti MA, Sorrentino F, Concilio L, Zappia V, Liu ZJ, Tempel W, Schubot F, Rose JP, Wang BC, Brereton PS, Jenney FE, Adams MW. The first agmatine/cadaverine aminopropyl transferase: biochemical and structural characterization of an enzyme involved in polyamine biosynthesis in the hyperthermophilic archaeon Pyrococcus furiosus. Journal of Bacteriology. 189: 6057-67. PMID 17545282 DOI: 10.1128/Jb.00151-07  0.549
2006 Schubot FD, Tropea JE, Waugh DS. Structure of the POZ domain of human LRF, a master regulator of oncogenesis. Biochemical and Biophysical Research Communications. 351: 1-6. PMID 17052694 DOI: 10.1016/J.Bbrc.2006.09.167  0.428
2005 Ferracci F, Schubot FD, Waugh DS, Plano GV. Selection and characterization of Yersinia pestis YopN mutants that constitutively block Yop secretion. Molecular Microbiology. 57: 970-87. PMID 16091038 DOI: 10.1111/J.1365-2958.2005.04738.X  0.371
2005 Schubot FD, Cherry S, Austin BP, Tropea JE, Waugh DS. Crystal structure of the protease-resistant core domain of Yersinia pestis virulence factor YopR. Protein Science : a Publication of the Protein Society. 14: 1679-83. PMID 15930010 DOI: 10.1110/Ps.051446405  0.419
2005 Schubot FD, Jackson MW, Penrose KJ, Cherry S, Tropea JE, Plano GV, Waugh DS. Three-dimensional structure of a macromolecular assembly that regulates type III secretion in Yersinia pestis. Journal of Molecular Biology. 346: 1147-61. PMID 15701523 DOI: 10.1016/J.Jmb.2004.12.036  0.401
2005 Shah AK, Liu ZJ, Stewart PD, Schubot FD, Rose JP, Newton MG, Wang BC. On increasing protein-crystallization throughput for X-ray diffraction studies. Acta Crystallographica. Section D, Biological Crystallography. 61: 123-9. PMID 15681862 DOI: 10.1107/S0907444904027064  0.536
2005 Yang H, Chang J, Shah A, Ng J, Tempel W, Schubot F, Liu Z, Rose J, Wang B. Crystal structure ofPfu838710: the first model of a Pfam CYTH domain Acta Crystallographica Section a Foundations of Crystallography. 61: c256-c256. DOI: 10.1107/S0108767305089087  0.422
2004 Kataeva IA, Uversky VN, Brewer JM, Schubot F, Rose JP, Wang BC, Ljungdahl LG. Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA. Protein Engineering, Design & Selection : Peds. 17: 759-69. PMID 15596428 DOI: 10.1093/Protein/Gzh094  0.348
2004 Schubot FD, Waugh DS. A pivotal role for reductive methylation in the de novo crystallization of a ternary complex composed of Yersinia pestis virulence factors YopN, SycN and YscB. Acta Crystallographica. Section D, Biological Crystallography. 60: 1981-6. PMID 15502305 DOI: 10.1107/S0907444904023005  0.41
2004 Tempel W, Liu ZJ, Schubot FD, Shah A, Weinberg MV, Jenney FE, Arendall WB, Adams MW, Richardson JS, Richardson DC, Rose JP, Wang BC. Structural genomics of Pyrococcus furiosus: X-ray crystallography reveals 3D domain swapping in rubrerythrin. Proteins. 57: 878-82. PMID 15468318 DOI: 10.1002/Prot.20280  0.527
2004 Schubot FD, Kataeva IA, Chang J, Shah AK, Ljungdahl LG, Rose JP, Wang BC. Structural basis for the exocellulase activity of the cellobiohydrolase CbhA from Clostridium thermocellum. Biochemistry. 43: 1163-70. PMID 14756552 DOI: 10.1021/Bi030202I  0.545
2001 Schubot FD, Kataeva IA, Blum DL, Shah AK, Ljungdahl LG, Rose JP, Wang BC. Structural basis for the substrate specificity of the feruloyl esterase domain of the cellulosomal xylanase Z from Clostridium thermocellum. Biochemistry. 40: 12524-32. PMID 11601976 DOI: 10.1021/Bi011391C  0.607
2001 Schubot FD, Chen CJ, Rose JP, Dailey TA, Dailey HA, Wang BC. Crystal structure of the transcription factor sc-mtTFB offers insights into mitochondrial transcription. Protein Science : a Publication of the Protein Society. 10: 1980-8. PMID 11567089 DOI: 10.1110/Ps.11201  0.557
2000 Blum DL, Schubot FD, Ljungdahl LG, Rose JP, Wang BC. Crystallization and preliminary X-ray analysis of the Clostridium thermocellum cellulosome xylanase Z feruloyl esterase domain. Acta Crystallographica. Section D, Biological Crystallography. 56: 1027-9. PMID 10944344 DOI: 10.1107/S0907444900006521  0.573
2000 Schubot FD, Chen CJ, Rose JP, Wang BC. Crystallization and preliminary X-ray diffraction analysis of the mitochondrial transcription factor sc-mtTFB from Saccharomyces cerevisiae. Acta Crystallographica. Section D, Biological Crystallography. 56: 902-3. PMID 10930839 DOI: 10.1107/S0907444900005060  0.578
1998 Schubot FD, Hossain MB, Van Der Helm D, Pais M, Debitus C. Crystal structure and absolute configuration of the indole alkaloid arborescidine C Journal of Chemical Crystallography. 28: 23-26. DOI: 10.1023/A:1021770401042  0.586
1996 Garrison GL, Berlin KD, Scherlag BJ, Lazzara R, Patterson E, Fazekas T, Sangiah S, Chen CL, Schubot FD, van der Helm D. Novel 3,7-diheterabicyclo[3.3.1]nonanes that possess predominant class III antiarrhythmic activity in 1-4 day post infarction dog models: X-ray diffraction analysis of 3-[4-(1H-imidazol-1-yl)benzoyl]-7-isopropyl-3,7-diazabicyclo[3.3.1]nona ne dihydroperchlorate. Journal of Medicinal Chemistry. 39: 2559-70. PMID 8691454 DOI: 10.1021/Jm950772J  0.518
1993 Garrison GL, Berlin KD, Scherlag BJ, Lazzara R, Patterson E, Sangiah S, Chen CL, Schubot F, Siripitayananon J. 3,7,9-Triheterabicyclo[3.3.2]decan-10-ones: an unusual family of heterocycles obtained from 3,7-diheterabicyclo[3.3.1]nonan-9-ones The Journal of Organic Chemistry. 58: 7670-7678. DOI: 10.1021/Jo00079A009  0.359
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