Paula M. Petrone, Ph.D. - Publications

Affiliations: 
2009 Stanford University, Palo Alto, CA 
Area:
theoretical methods to understand the physical properties of biological molecules

6/28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Casamitjana A, Petrone P, Molinuevo JL, Gispert JD, Vilaplana V. Projection to Latent Spaces Disentangles Pathological Effects on Brain Morphology in the Asymptomatic Phase of Alzheimer's Disease. Frontiers in Neurology. 11: 648. PMID 32849173 DOI: 10.3389/Fneur.2020.00648  0.308
2020 Casamitjana A, Petrone P, Molinuevo JL, Gispert JD, Vilaplana V. Shared Latent Structures Between Imaging Features and Biomarkers in Early Stages of Alzheimer's Disease: A Predictive Study Ieee Journal of Biomedical and Health Informatics. 24: 365-376. PMID 31380776 DOI: 10.1109/Jbhi.2019.2932565  0.319
2019 Petrone PM, Casamitjana A, Falcon C, Artigues M, Operto G, Cacciaglia R, Molinuevo JL, Vilaplana V, Gispert JD. Prediction of amyloid pathology in cognitively unimpaired individuals using voxel-wise analysis of longitudinal structural brain MRI. Alzheimer's Research & Therapy. 11: 72. PMID 31421683 DOI: 10.1186/S13195-019-0526-8  0.305
2008 Petrone PM, Snow CD, Lucent D, Pande VS. Side-chain recognition and gating in the ribosome exit tunnel. Proceedings of the National Academy of Sciences of the United States of America. 105: 16549-54. PMID 18946046 DOI: 10.1073/Pnas.0801795105  0.506
2008 Sweet CR, Petrone P, Pande VS, Izaguirre JA. Normal mode partitioning of Langevin dynamics for biomolecules. The Journal of Chemical Physics. 128: 145101. PMID 18412479 DOI: 10.1063/1.2883966  0.437
2006 Petrone P, Pande VS. Can conformational change be described by only a few normal modes? Biophysical Journal. 90: 1583-1593. PMID 16361336 DOI: 10.1529/Biophysj.105.070045  0.452
Low-probability matches (unlikely to be authored by this person)
2018 Casamitjana A, Petrone P, Tucholka A, Falcon C, Skouras S, Molinuevo JL, Vilaplana V, Gispert JD, Initiative ADN. MRI-Based Screening of Preclinical Alzheimer's Disease for Prevention Clinical Trials. Journal of Alzheimer's Disease. 64: 1099-1112. PMID 30010132 DOI: 10.3233/Jad-180299  0.3
2011 Petrone PM, Dewhurst J, Tommasi R, Whitehead L, Pomerantz AK. Atomic-scale characterization of conformational changes in the preQ₁ riboswitch aptamer upon ligand binding. Journal of Molecular Graphics & Modelling. 30: 179-85. PMID 21831681 DOI: 10.1016/J.Jmgm.2011.07.006  0.296
2016 Cortes Cabrera A, Lucena-Agell D, Redondo-Horcajo M, Barasoain I, Díaz JF, Fasching B, Petrone PM. Aggregated compound biological signatures facilitate phenotypic drug discovery and target elucidation. Acs Chemical Biology. PMID 27564241 DOI: 10.1021/Acschembio.6B00358  0.29
2012 Lounkine E, Kutchukian P, Petrone P, Davies JW, Glick M. Chemotography for multi-target SAR analysis in the context of biological pathways. Bioorganic & Medicinal Chemistry. 20: 5416-27. PMID 22405595 DOI: 10.1016/J.Bmc.2012.02.034  0.286
2017 Cabrera AC, Melo E, Roth D, Topp A, Delobel F, Stucki C, Chen CY, Jakob P, Banfai B, Dunkley T, Schilling O, Huber S, Iacone R, Petrone P. HtrA1 activation is driven by an allosteric mechanism of inter-monomer communication. Scientific Reports. 7: 14804. PMID 29093542 DOI: 10.1038/S41598-017-14208-Z  0.285
2004 Petrone PM, Garcia AE. MHC-peptide binding is assisted by bound water molecules. Journal of Molecular Biology. 338: 419-35. PMID 15066441 DOI: 10.1016/J.Jmb.2004.02.039  0.269
2012 Petrone PM, Simms B, Nigsch F, Lounkine E, Kutchukian P, Cornett A, Deng Z, Davies JW, Jenkins JL, Glick M. Rethinking molecular similarity: comparing compounds on the basis of biological activity. Acs Chemical Biology. 7: 1399-409. PMID 22594495 DOI: 10.1021/Cb3001028  0.266
2018 Petrone PM, Casamitjana A, Falcon C, Artigues M, Operto G, Skouras S, Cacciaglia R, Molinuevo JL, Vilaplana V, Gispert JD, Salvadó G, Initiative ADN. P3-375: Characteristic Brain Volumetric Changes In The Ad Preclinical Signature Alzheimers & Dementia. 14: 1235-1235. DOI: 10.1016/J.Jalz.2018.06.1737  0.265
2013 Petrone PM, Wassermann AM, Lounkine E, Kutchukian P, Simms B, Jenkins J, Selzer P, Glick M. Biodiversity of small molecules--a new perspective in screening set selection. Drug Discovery Today. 18: 674-80. PMID 23454345 DOI: 10.1016/J.Drudis.2013.02.005  0.261
2019 Bravo A, de Lucio H, Sánchez-Murcia PA, Jiménez-Ruiz A, Petrone PM, Gago F, Cortés Cabrera A. Identification of NEK3 and MOK as novel targets for lithium. Chemical Biology & Drug Design. PMID 30667602 DOI: 10.1111/Cbdd.13487  0.259
2019 Casamitjana A, Petrone PM, Falcon C, Artigues M, Operto G, Cacciaglia R, Molinuevo JL, Vilaplana V, Gispert JD, Initiative ADN. P2-389: Detection Of Amyloid-Positive Cognitively Unimpaired Individuals Using Voxel-Based Machine Learning On Structural Longitudinal Brain Mri Alzheimers & Dementia. 15. DOI: 10.1016/J.Jalz.2019.06.2796  0.256
2018 Cortes Cabrera A, Petrone PM. Optimal HTS fingerprints definitions by using a desirability function and a genetic algorithm. Journal of Chemical Information and Modeling. PMID 29425455 DOI: 10.1021/Acs.Jcim.7B00447  0.249
2017 Skouras S, Falcon C, Petrone PM, Tucholka A, Rami L, Sánchez-Valle R, Lladó A, Gispert JD, Molinuevo JL. Toward A Functional Neuromarker For Preclinical Ad: Eigenvector Centrality Reveals Preclinical Differences Of Functional Information Flow In The Hippocampus, Precuneus, Cerebellum And Inferior Parietal Lobule Alzheimers & Dementia. 13. DOI: 10.1016/J.Jalz.2017.06.2082  0.243
2017 Petrone P, Besler VV, Díaz AC, Gispert JD, Molinuevo JL, Escobedo DS. Magnetic resonance imaging and machine learning make a valuable combined tool for the screening of preclinical AD Alzheimers & Dementia. 13: 1245-1245. DOI: 10.1016/J.Jalz.2017.07.457  0.242
2018 Díaz AC, Petrone P, Artigues M, Molinuevo JL, Gispert JD, Besler VV. Projection to latent spaces disentangles specific cerebral morphometric patterns associated to aging and preclinical AD Alzheimers & Dementia. 14: 869-870. DOI: 10.1016/J.Jalz.2018.06.1111  0.24
2022 Maitre L, Guimbaud JB, Warembourg C, Güil-Oumrait N, Petrone PM, Chadeau-Hyam M, Vrijheid M, Basagaña X, Gonzalez JR. State-of-the-art methods for exposure-health studies: Results from the exposome data challenge event. Environment International. 168: 107422. PMID 36058017 DOI: 10.1016/j.envint.2022.107422  0.129
2024 Balerdi-Sarasola L, Pedro F, Bottieau E, Genton B, Petrone P, Muñoz J, Camprubí-Ferrer D. MALrisk: a machne-learning based tool to predict imported malaria in returned travellers with fever. Journal of Travel Medicine. PMID 38578987 DOI: 10.1093/jtm/taae054  0.12
2024 Fleitas PE, Sarasola LB, Ferrer DC, Muñoz J, Petrone P. Machine learning approach to identify malaria risk in travelers using real-world evidence. Heliyon. 10: e28534. PMID 38560112 DOI: 10.1016/j.heliyon.2024.e28534  0.12
2022 Macià D, Campo JJ, Moncunill G, Jairoce C, Nhabomba AJ, Mpina M, Sorgho H, Dosoo D, Traore O, Kusi KA, Williams NA, Oberai A, Randall A, Sanz H, Valim C, ... ... Petrone P, et al. Strong off-target antibody reactivity to malarial antigens induced by RTS,S/AS01E vaccination is associated with protection. Jci Insight. PMID 35446785 DOI: 10.1172/jci.insight.158030  0.07
1986 Cwynar JC, Nasol AL, Petrone PM, Dietrich AJ. RETROFIT AND OPERATION OF LOW-LEVEL RADWASTE SOLIDIFICATION SYSTEM. . 575-579.  0.022
2023 Llopis M, Ventura PS, Brachowicz N, Sangüesa J, Murcia M, Lopez-Espinosa MJ, García-Baquero G, Lertxundi A, Vrijheid M, Casas M, Petrone P. Sociodemographic, lifestyle, and environmental determinants of vitamin D levels in pregnant women in Spain. Environment International. 182: 108293. PMID 37984291 DOI: 10.1016/j.envint.2023.108293  0.01
1984 Cwynar JC, Eisenstatt LR, Goodman J, Petrone PM. LOW-LEVEL AND TRU WASTE MANAGEMENT AT WEST VALLEY. . 369-374.  0.01
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