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Benjamin Wylie, Ph.D. - Publications

Affiliations: 
2008 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
solid-state NMR to interrogate the structures of integral and peripheral membrane proteins
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44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Yekefallah M, van Aalst EJ, van Beekveld RAM, Eason IR, Breukink E, Weingarth M, Wylie BJ. Cooperative Gating of a K Channel by Unmodified Biological Anionic Lipids Viewed by Solid-State NMR Spectroscopy. Journal of the American Chemical Society. 146: 4421-4432. PMID 38334076 DOI: 10.1021/jacs.3c09266  0.327
2023 van Aalst EJ, Jang J, Halligan TC, Wylie BJ. Strategies for acquisition of resonance assignment spectra of highly dynamic membrane proteins: a GPCR case study. Journal of Biomolecular Nmr. PMID 37493866 DOI: 10.1007/s10858-023-00421-8  0.313
2023 van Aalst EJ, McDonald CJ, Wylie BJ. Cholesterol Biases the Conformational Landscape of the Chemokine Receptor CCR3: A MAS SSNMR-Filtered Molecular Dynamics Study. Journal of Chemical Information and Modeling. 63: 3068-3085. PMID 37127541 DOI: 10.1021/acs.jcim.2c01546  0.313
2022 Yekefallah M, Rasberry CA, van Aalst EJ, Browning HP, Amani R, Versteeg DB, Wylie BJ. Mutational Insight into Allosteric Regulation of Kir Channel Activity. Acs Omega. 7: 43621-43634. PMID 36506180 DOI: 10.1021/acsomega.2c04456  0.551
2022 Borcik CG, Eason IR, Vanderloop B, Wylie BJ. H,C-Cholesterol for Dynamics and Structural Studies of Biological Membranes. Acs Omega. 7: 17151-17160. PMID 35647452 DOI: 10.1021/acsomega.2c00796  0.749
2022 van Aalst EJ, Borcik CG, Wylie BJ. Spectroscopic signatures of bilayer ordering in native biological membranes. Biochimica Et Biophysica Acta. Biomembranes. 183891. PMID 35217001 DOI: 10.1016/j.bbamem.2022.183891  0.746
2022 Borcik CG, Eason IR, Yekefellah M, Amani R, Han R, Vanderloop BH, Wylie B. A Cholesterol Dimer Stabilizes the Inactivated State of an Inward-rectifier Potassium Channel. Angewandte Chemie (International Ed. in English). PMID 34985791 DOI: 10.1002/anie.202112232  0.8
2021 Amani R, Schwieters CD, Borcik CG, Eason IR, Han R, Harding BD, Wylie BJ. Water Accessibility Refinement of the Extended Structure of KirBac1.1 in the Closed State. Frontiers in Molecular Biosciences. 8: 772855. PMID 34917650 DOI: 10.3389/fmolb.2021.772855  0.823
2021 Hu J, Zanca F, McManus GJ, Riha IA, Nguyen HGT, Shirley W, Borcik CG, Wylie BJ, Benamara M, van Zee RD, Moghadam PZ, Beyzavi H. Catalyst-Enabled Linkage Reduction in Imine Covalent Organic Frameworks. Acs Applied Materials & Interfaces. PMID 33913321 DOI: 10.1021/acsami.1c02709  0.697
2021 Do HQ, Hewetson A, Borcik CG, Hastert MC, Whelly S, Wylie BJ, Sutton RB, Cornwall GA. Cross-seeding Between the Functional Amyloidogenic CRES and CRES3 Family Members and their Regulation of Aβ Assembly. The Journal of Biological Chemistry. 100250. PMID 33428930 DOI: 10.1074/jbc.RA120.015307  0.702
2020 Do HQ, Hewetson A, Borcik CG, Hastert MC, Whelly S, Wylie BJ, Sutton RB, Cornwall GA. Cross-seeding Between the Functional Amyloidogenic CRES and CRES3 Family Members and their Regulation of Aβ Assembly. The Journal of Biological Chemistry. PMID 33384380 DOI: 10.1074/jbc.RA120.015307  0.702
2020 Borcik CG, Versteeg DB, Amani R, Yekefallah M, Khan NH, Wylie BJ. The Lipid Activation Mechanism of a Transmembrane Potassium Channel. Journal of the American Chemical Society. PMID 32702990 DOI: 10.1021/Jacs.0C01991  0.781
2020 Hewetson A, Khan NH, Dominguez MJ, Do HQ, Kusko RE, Borcik CG, Rigden DJ, Keegan RM, Sutton RB, Latham MP, Wylie BJ, Cornwall GA. Maturation of the functional mouse CRES amyloid from globular form. Proceedings of the National Academy of Sciences of the United States of America. PMID 32601205 DOI: 10.1073/Pnas.2006887117  0.733
2020 van Aalst E, Yekefallah M, Mehta AK, Eason I, Wylie B. Codon Harmonization of a Kir3.1-KirBac1.3 Chimera for Structural Study Optimization. Biomolecules. 10. PMID 32164257 DOI: 10.3390/biom10030430  0.386
2020 Amani R, Borcik CG, Khan NH, Versteeg DB, Yekefallah M, Do HQ, Coats HR, Wylie BJ. Conformational changes upon gating of KirBac1.1 into an open-activated state revealed by solid-state NMR and functional assays. Proceedings of the National Academy of Sciences of the United States of America. PMID 31980523 DOI: 10.1073/Pnas.1915010117  0.795
2019 Borcik CG, Versteeg DB, Wylie BJ. An Inward-Rectifier Potassium Channel Coordinates the Properties of Biologically Derived Membranes. Biophysical Journal. 116: 1701-1718. PMID 31010661 DOI: 10.1016/J.Bpj.2019.03.023  0.751
2018 Wylie B, Borcik C, Hardy E. The Functional Relationship between a Kir Channel and the Lipid Membrane Biophysical Journal. 114: 610a. DOI: 10.1016/J.Bpj.2017.11.3334  0.726
2016 Harris MJ, Struppe JO, Wylie BJ, McDermott AE, Thompson LK. Multidimensional Solid-State NMR of a Functional Multiprotein Chemoreceptor Array. Biochemistry. PMID 27295350 DOI: 10.1021/Acs.Biochem.6B00234  0.636
2016 Wylie BJ, Do HQ, Borcik CG, Hardy EP. Advances in solid-state NMR of membrane proteins Molecular Physics. 114: 3598-3609. DOI: 10.1080/00268976.2016.1252470  0.768
2015 Wylie BJ, Dzikovski BG, Pawsey S, Caporini M, Rosay M, Freed JH, McDermott AE. Dynamic nuclear polarization of membrane proteins: covalently bound spin-labels at protein-protein interfaces. Journal of Biomolecular Nmr. 61: 361-7. PMID 25828256 DOI: 10.1007/S10858-015-9919-6  0.61
2014 Wylie BJ, Bhate MP, McDermott AE. Transmembrane allosteric coupling of the gates in a potassium channel Proceedings of the National Academy of Sciences of the United States of America. 111: 185-190. PMID 24344306 DOI: 10.1073/Pnas.1319577110  0.526
2014 Harris MJ, Weis RM, Struppe JO, Wylie BJ, McDermott AE, Thompson LK. Multidimensional Solid-State NMR of Functional Chemotaxis Receptor Signaling Complexes Biophysical Journal. 106: 104a. DOI: 10.1016/J.Bpj.2013.11.645  0.623
2013 Bhate MP, Wylie BJ, Thompson A, Tian L, Nimigean C, McDermott AE. Preparation of uniformly isotope labeled KcsA for solid state NMR: Expression, purification, reconstitution into liposomes and functional assay Protein Expression and Purification. 91: 119-124. PMID 23916531 DOI: 10.1016/J.Pep.2013.07.013  0.633
2012 Mollica L, Baias M, Lewandowski JR, Wylie BJ, Sperling LJ, Rienstra CM, Emsley L, Blackledge M. Atomic-Resolution Structural Dynamics in Crystalline Proteins from NMR and Molecular Simulation. The Journal of Physical Chemistry Letters. 3: 3657-62. PMID 26291002 DOI: 10.1021/Jz3016233  0.79
2012 Mollica L, Baias M, Lewandowski JR, Wylie BJ, Sperling LJ, Rienstra CM, Emsley L, Blackledge M. Atomic-resolution structural dynamics in crystalline proteins from NMR and molecular simulation Journal of Physical Chemistry Letters. 3: 3657-3662. DOI: 10.1021/jz3016233  0.784
2011 Wylie BJ, Sperling LJ, Nieuwkoop AJ, Franks WT, Oldfield E, Rienstra CM. Ultrahigh resolution protein structures using NMR chemical shift tensors. Proceedings of the National Academy of Sciences of the United States of America. 108: 16974-9. PMID 21969532 DOI: 10.1073/Pnas.1103728108  0.792
2010 Bhate MP, Wylie BJ, Tian L, McDermott AE. Conformational dynamics in the selectivity filter of KcsA in response to potassium ion concentration Journal of Molecular Biology. 401: 155-166. PMID 20600123 DOI: 10.1016/J.Jmb.2010.06.031  0.553
2010 Bhate M, Wylie B, Tian L, McDermott A. [K+] Induced Conformational Dynamics of the Selectivity Filter of KcsA Monitored by Solid-State NMR Biophysical Journal. 98: 331a. DOI: 10.1016/J.Bpj.2009.12.1799  0.611
2009 Nieuwkoop AJ, Wylie BJ, Franks WT, Shah GJ, Rienstra CM. Atomic resolution protein structure determination by three-dimensional transferred echo double resonance solid-state nuclear magnetic resonance spectroscopy. The Journal of Chemical Physics. 131: 095101. PMID 19739873 DOI: 10.1063/1.3211103  0.822
2009 Wylie BJ, Schwieters CD, Oldfield E, Rienstra CM. Protein structure refinement using 13C alpha chemical shift tensors. Journal of the American Chemical Society. 131: 985-92. PMID 19123862 DOI: 10.1021/Ja804041P  0.618
2008 Franks WT, Wylie BJ, Schmidt HL, Nieuwkoop AJ, Mayrhofer RM, Shah GJ, Graesser DT, Rienstra CM. Dipole tensor-based atomic-resolution structure determination of a nanocrystalline protein by solid-state NMR. Proceedings of the National Academy of Sciences of the United States of America. 105: 4621-6. PMID 18344321 DOI: 10.1073/Pnas.0712393105  0.817
2008 Wylie BJ, Rienstra CM. Multidimensional solid state NMR of anisotropic interactions in peptides and proteins. The Journal of Chemical Physics. 128: 052207. PMID 18266412 DOI: 10.1063/1.2834735  0.647
2008 Wylie BJ, Sperling LJ, Rienstra CM. Isotropic chemical shifts in magic-angle spinning NMR spectra of proteins. Physical Chemistry Chemical Physics : Pccp. 10: 405-13. PMID 18174982 DOI: 10.1039/B710736F  0.801
2007 Graesser DT, Wylie BJ, Nieuwkoop AJ, Franks WT, Rienstra CM. Long-range 19F-15N distance measurements in highly-13C, 15N-enriched solid proteins with 19F-dephased REDOR shift (FRESH) spectroscopy. Magnetic Resonance in Chemistry : Mrc. 45: S129-34. PMID 18157807 DOI: 10.1002/Mrc.2126  0.796
2007 Schmidt HL, Sperling LJ, Gao YG, Wylie BJ, Boettcher JM, Wilson SR, Rienstra CM. Crystal polymorphism of protein GB1 examined by solid-state NMR spectroscopy and X-ray diffraction. The Journal of Physical Chemistry. B. 111: 14362-9. PMID 18052145 DOI: 10.1021/Jp075531P  0.785
2007 Zhou DH, Shea JJ, Nieuwkoop AJ, Franks WT, Wylie BJ, Mullen C, Sandoz D, Rienstra CM. Solid-state protein-structure determination with proton-detected triple-resonance 3D magic-angle-spinning NMR spectroscopy. Angewandte Chemie (International Ed. in English). 46: 8380-3. PMID 17907259 DOI: 10.1002/Anie.200702905  0.821
2007 Franks WT, Kloepper KD, Wylie BJ, Rienstra CM. Four-dimensional heteronuclear correlation experiments for chemical shift assignment of solid proteins. Journal of Biomolecular Nmr. 39: 107-31. PMID 17687624 DOI: 10.1007/S10858-007-9179-1  0.808
2007 Wylie BJ, Sperling LJ, Frericks HL, Shah GJ, Franks WT, Rienstra CM. Chemical-shift anisotropy measurements of amide and carbonyl resonances in a microcrystalline protein with slow magic-angle spinning NMR spectroscopy. Journal of the American Chemical Society. 129: 5318-9. PMID 17425317 DOI: 10.1021/Ja0701199  0.812
2007 Zhou D, Shea J, Nieuwkoop A, Franks WT, Wylie B, Mullen C, Sandoz D, Rienstra C. Solid-State Protein Structure Determination with Proton-Detected TripleResonance 3D Magic-Angle Spinning NMR Spectroscopy: Beta-1 ImmunoglobulinBinding Domain of Protein G (GB1) Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr15156  0.791
2006 Wylie BJ, Franks WT, Rienstra CM. Determinations of 15N chemical shift anisotropy magnitudes in a uniformly 15N,13C-labeled microcrystalline protein by three-dimensional magic-angle spinning nuclear magnetic resonance spectroscopy. The Journal of Physical Chemistry. B. 110: 10926-36. PMID 16771346 DOI: 10.1021/Jp060507H  0.791
2006 Franks WT, Wylie BJ, Stellfox SA, Rienstra CM. Backbone conformational constraints in a microcrystalline U-15N-labeled protein by 3D dipolar-shift solid-state NMR spectroscopy. Journal of the American Chemical Society. 128: 3154-5. PMID 16522090 DOI: 10.1021/Ja058292X  0.793
2006 Li Y, Wylie BJ, Rienstra CM. Selective refocusing pulses in magic-angle spinning NMR: characterization and applications to multi-dimensional protein spectroscopy. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 179: 206-16. PMID 16406627 DOI: 10.1016/J.Jmr.2005.12.003  0.606
2005 Franks WT, Zhou DH, Wylie BJ, Money BG, Graesser DT, Frericks HL, Sahota G, Rienstra CM. Magic-angle spinning solid-state NMR spectroscopy of the beta1 immunoglobulin binding domain of protein G (GB1): 15N and 13C chemical shift assignments and conformational analysis. Journal of the American Chemical Society. 127: 12291-305. PMID 16131207 DOI: 10.1021/Ja044497E  0.804
2005 Wylie BJ, Franks WT, Graesser DT, Rienstra CM. Site-specific 13C chemical shift anisotropy measurements in a uniformly 15N,13C-labeled microcrystalline protein by 3D magic-angle spinning NMR spectroscopy. Journal of the American Chemical Society. 127: 11946-7. PMID 16117526 DOI: 10.1021/Ja053862E  0.797
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