| Year |
Citation |
Score |
| 2023 |
Herrgott GA, Snyder JM, She R, Malta TM, Sabedot TS, Lee IY, Pawloski J, Podolsky-Gondim GG, Asmaro KP, Zhang J, Cannella CE, Nelson K, Thomas B, deCarvalho AC, Hasselbach LA, ... ... Weisenberger DJ, et al. Detection of diagnostic and prognostic methylation-based signatures in liquid biopsy specimens from patients with meningiomas. Nature Communications. 14: 5669. PMID 37704607 DOI: 10.1038/s41467-023-41434-z |
0.305 |
|
| 2023 |
Zhou X, Sekino Y, Li HT, Fu G, Yang Z, Zhao S, Gujar H, Zu X, Weisenberger DJ, Gill IS, Tulpule V, D'souza A, Quinn DI, Han B, Liang G. SETD2 Deficiency Confers Sensitivity to Dual Inhibition of DNA Methylation and PARP in Kidney Cancer. Cancer Research. PMID 37695044 DOI: 10.1158/0008-5472.CAN-23-0401 |
0.401 |
|
| 2023 |
Devall MA, Eaton S, Hu G, Sun X, Jakum E, Venkatesh S, Powell SM, Yoshida C, Weisenberger DJ, Cooper GS, Willis J, Ebrahim S, Zoellner J, Casey G, Li L. Potential role of fructose on human colon DNA methylation in racial disparities observed for colorectal cancer risk. Medrxiv : the Preprint Server For Health Sciences. PMID 37398462 DOI: 10.1101/2023.05.31.23290777 |
0.359 |
|
| 2023 |
Li HT, Jang HJ, Rohena-Rivera K, Liu M, Gujar H, Kulchycki J, Zhao S, Billet S, Zhou X, Weisenberger DJ, Gill I, Jones PA, Bhowmick NA, Liang G. RNA mis-splicing drives viral mimicry response after DNMTi therapy in SETD2-mutant kidney cancer. Cell Reports. 42: 112016. PMID 36662621 DOI: 10.1016/j.celrep.2023.112016 |
0.348 |
|
| 2023 |
Piras IS, Brokaw D, Kong Y, Weisenberger DJ, Krate J, Delvaux E, Mahurkar S, Blattler A, Siegmund KD, Sue L, Serrano GE, Beach TG, Laird PW, Huentelman MJ, Coleman PD. Integrated DNA Methylation/RNA Profiling in Middle Temporal Gyrus of Alzheimer's Disease. Cellular and Molecular Neurobiology. PMID 36596913 DOI: 10.1007/s10571-022-01307-3 |
0.374 |
|
| 2022 |
Devall MA, Sun X, Eaton S, Cooper GS, Willis JE, Weisenberger DJ, Casey G, Li L. A Race-Specific, DNA Methylation Analysis of Aging in Normal Rectum: Implications for the Biology of Aging and Its Relationship to Rectal Cancer. Cancers. 15. PMID 36612042 DOI: 10.3390/cancers15010045 |
0.356 |
|
| 2022 |
Weisenberger DJ, Lakshminarasimhan R, Liang G. The Role of DNA Methylation and DNA Methyltransferases in Cancer. Advances in Experimental Medicine and Biology. 1389: 317-348. PMID 36350516 DOI: 10.1007/978-3-031-11454-0_13 |
0.53 |
|
| 2022 |
Li HT, Xu L, Weisenberger DJ, Li M, Zhou W, Peng CC, Stachelek K, Cobrinik D, Liang G, Berry JL. Characterizing DNA methylation signatures of retinoblastoma using aqueous humor liquid biopsy. Nature Communications. 13: 5523. PMID 36130950 DOI: 10.1038/s41467-022-33248-2 |
0.395 |
|
| 2022 |
Devall MA, Eaton S, Ali MW, Dampier CH, Weisenberger D, Powell SM, Li L, Casey G. DNA methylation analysis of normal colon organoids from familial adenomatous polyposis patients reveals novel insight into colon cancer development. Clinical Epigenetics. 14: 104. PMID 35999641 DOI: 10.1186/s13148-022-01324-5 |
0.354 |
|
| 2022 |
Wedemeyer MA, Muskens I, Strickland BA, Aurelio O, Martirosian V, Wiemels JL, Weisenberger DJ, Wang K, Mukerjee D, Rhie SK, Zada G. Epigenetic dysregulation in meningiomas. Neuro-Oncology Advances. 4: vdac084. PMID 35769412 DOI: 10.1093/noajnl/vdac084 |
0.361 |
|
| 2022 |
Papaiz DD, Rius FE, Ayub ALP, Origassa CS, Gujar H, Pessoa DO, Reis EM, Nsengimana J, Newton-Bishop J, Mason CE, Weisenberger DJ, Liang G, Jasiulionis MG. Genes regulated by DNA methylation are involved in distinct phenotypes during melanoma progression and are prognostic factors for patients. Molecular Oncology. PMID 35075772 DOI: 10.1002/1878-0261.13185 |
0.418 |
|
| 2022 |
Gabbutt C, Schenck RO, Weisenberger DJ, Kimberley C, Berner A, Househam J, Lakatos E, Robertson-Tessi M, Martin I, Patel R, Clark SK, Latchford A, Barnes CP, Leedham SJ, Anderson ARA, et al. Fluctuating methylation clocks for cell lineage tracing at high temporal resolution in human tissues. Nature Biotechnology. PMID 34980912 DOI: 10.1038/s41587-021-01109-w |
0.321 |
|
| 2021 |
Gujar H, Mehta A, Li HT, Tsai YC, Qiu X, Weisenberger DJ, Jasiulionis MG, In GK, Liang G. Characterizing DNA methylation signatures and their potential functional roles in Merkel cell carcinoma. Genome Medicine. 13: 130. PMID 34399838 DOI: 10.1186/s13073-021-00946-3 |
0.331 |
|
| 2021 |
Xu Z, Gujar H, Fu G, Ahmadi H, Bhanvadia S, Weisenberger DJ, Jin B, Gill PS, Gill I, Daneshmand S, Siegmund KD, Liang G. A Novel DNA Methylation Signature as an Independent Prognostic Factor in Muscle-Invasive Bladder Cancer. Frontiers in Oncology. 11: 614927. PMID 33659216 DOI: 10.3389/fonc.2021.614927 |
0.335 |
|
| 2020 |
Pan P, Weisenberger DJ, Zheng S, Wolf M, Hwang DG, Rose-Nussbaumer JR, Jurkunas UV, Chan MF. Author Correction: Aberrant DNA methylation of miRNAs in Fuchs endothelial corneal dystrophy. Scientific Reports. 10: 2395. PMID 32024933 DOI: 10.1038/S41598-020-59304-9 |
0.362 |
|
| 2020 |
Arai H, Xiao Y, Loupakis F, Stintzing S, Wang J, Battaglin F, Soni S, Zhang W, Mancao C, Salhia B, Mumenthaler SM, Weisenberger DJ, Liang G, Cremolini C, Heinemann V, et al. Genetic variants in immunogenic cell death (ICD) relating genes to predict outcome in metastatic colorectal cancer (mCRC): Data from FIRE-3, TRIBE and MAVERICC trials. Journal of Clinical Oncology. 38: 187-187. DOI: 10.1200/Jco.2020.38.4_Suppl.187 |
0.313 |
|
| 2020 |
Gujar H, Zhang L, Li H, Otani H, Weisenberger DJ, Erdreich-Epstein A, Liang G. Abstract 462: The mutated chromatin modifier gene, H3F3AK27M, is a druggable target of DNA hypomethylating agents in pediatric high-grade glioma Cancer Research. 80: 462-462. DOI: 10.1158/1538-7445.Am2020-462 |
0.446 |
|
| 2019 |
Pan P, Weisenberger DJ, Zheng S, Wolf M, Hwang DG, Rose-Nussbaumer JR, Jurkunas UV, Chan MF. Aberrant DNA methylation of miRNAs in Fuchs endothelial corneal dystrophy. Scientific Reports. 9: 16385. PMID 31705138 DOI: 10.1038/S41598-019-52727-Z |
0.336 |
|
| 2019 |
Davis Lynn BC, Bodelon C, Pfeiffer RM, Yang HP, Yang H, Lee M, Laird PW, Campan M, Weisenberger DJ, Murphy J, Sampson JN, Browne EP, Anderton DL, Sherman ME, Arcaro KF, et al. Differences in genome-wide DNA methylation profiles in breast milk by race and lactation duration. Cancer Prevention Research (Philadelphia, Pa.). PMID 31481539 DOI: 10.1158/1940-6207.Capr-19-0169 |
0.443 |
|
| 2019 |
Tokunaga R, Cao S, Naseem M, Battaglin F, Lo JH, Arai H, Loupakis F, Stintzing S, Puccini A, Berger MD, Soni S, Zhang W, Mancao C, Salhia B, Mumenthaler SM, ... Weisenberger DJ, et al. AMPK variant, a candidate of novel predictor for chemotherapy in metastatic colorectal cancer: a meta-analysis using TRIBE, MAVERICC, and FIRE3. International Journal of Cancer. PMID 30856283 DOI: 10.1002/Ijc.32261 |
0.313 |
|
| 2019 |
Puccini A, Loupakis F, Stintzing S, Cao S, Battaglin F, Togunaka R, Naseem M, Berger MD, Soni S, Zhang W, Mancao C, Salhia B, Mumenthaler SM, Weisenberger DJ, Liang G, et al. Impact of polymorphisms within genes involved in regulating DNA methylation in patients with metastatic colorectal cancer enrolled in three independent, randomised, open-label clinical trials: a meta-analysis from TRIBE, MAVERICC and FIRE-3. European Journal of Cancer (Oxford, England : 1990). 111: 138-147. PMID 30852420 DOI: 10.1016/J.Ejca.2019.01.105 |
0.523 |
|
| 2019 |
Gujar H, Weisenberger DJ, Liang G. The Roles of Human DNA Methyltransferases and Their Isoforms in Shaping the Epigenome. Genes. 10. PMID 30813436 DOI: 10.3390/Genes10020172 |
0.522 |
|
| 2019 |
Wang J, Van Den Berg D, Hwang AE, Weisenberger D, Triche T, Nathwani BN, Conti DV, Siegmund K, Mack TM, Horvath S, Cozen W. DNA methylation patterns of adult survivors of adolescent/young adult Hodgkin lymphoma compared to their unaffected monozygotic twin. Leukemia & Lymphoma. 1-9. PMID 30668190 DOI: 10.1080/10428194.2018.1533128 |
0.405 |
|
| 2019 |
Tokunaga R, Cao S, Battaglin F, Lo JH, Loupakis F, Stintzing S, Naseem M, Puccini A, Berger MD, Zhang W, Mancao C, Salhia B, Mumenthaler SM, Weisenberger DJ, Liang G, et al. Th17 cell pathway-related genetic variants in metastatic colorectal cancer: A meta-analysis using TRIBE, MAVERICC, and FIRE-3. Journal of Clinical Oncology. 37: 594-594. DOI: 10.1200/Jco.2019.37.4_Suppl.594 |
0.319 |
|
| 2018 |
Yeon A, You S, Kim M, Gupta A, Park MH, Weisenberger DJ, Liang G, Kim J. Rewiring of cisplatin-resistant bladder cancer cells through epigenetic regulation of genes involved in amino acid metabolism. Theranostics. 8: 4520-4534. PMID 30214636 DOI: 10.7150/Thno.25130 |
0.476 |
|
| 2018 |
Liu M, Zhang L, Li H, Hinoue T, Zhou W, Ohtani H, El-Khoueiry A, Daniels J, O'Connell C, Dorff TB, Lu Q, Weisenberger DJ, Liang G. Integrative Epigenetic Analysis Reveals Therapeutic Targets to the DNA Methyltransferase Inhibitor SGI-110 in Hepatocellular Carcinoma. Hepatology (Baltimore, Md.). PMID 29774579 DOI: 10.1002/Hep.30091 |
0.451 |
|
| 2018 |
Zhou W, Dinh HQ, Ramjan Z, Weisenberger DJ, Nicolet CM, Shen H, Laird PW, Berman BP. DNA methylation loss in late-replicating domains is linked to mitotic cell division. Nature Genetics. PMID 29610480 DOI: 10.1038/S41588-018-0073-4 |
0.546 |
|
| 2018 |
Campan M, Weisenberger DJ, Trinh B, Laird PW. MethyLight and Digital MethyLight. Methods in Molecular Biology (Clifton, N.J.). 1708: 497-513. PMID 29224160 DOI: 10.1007/978-1-4939-7481-8_25 |
0.425 |
|
| 2018 |
Lynn BD, Bodelon C, Pfeiffer R, Yang H, Yang H, Lee M, Laird P, Campan M, Weisenberger D, Murphy J, Sherman M, Browne E, Anderton D, Arcaro K, Gierach G. Abstract P6-10-07: Differences in genome-wide DNA methylation levels in breast milk by race and lactation duration Cancer Research. 78. DOI: 10.1158/1538-7445.Sabcs17-P6-10-07 |
0.444 |
|
| 2018 |
Zhou W, Dinh HQ, Ramjan Z, Weisenberger DJ, Nicolet CM, Shen H, Laird PW, Berman BP. Abstract 5327: DNA methylation loss in late-replicating domains is linked to mitotic cell division Cancer Research. 78: 5327-5327. DOI: 10.1158/1538-7445.Am2018-5327 |
0.548 |
|
| 2017 |
Weisenberger DJ, Liang G, Lenz HJ. DNA methylation aberrancies delineate clinically distinct subsets of colorectal cancer and provide novel targets for epigenetic therapies. Oncogene. PMID 28991233 DOI: 10.1038/onc.2017.374 |
0.486 |
|
| 2017 |
Khuc E, Bainer R, Wolf M, Clay SM, Weisenberger DJ, Kemmer J, Weaver VM, Hwang DG, Chan MF. Comprehensive characterization of DNA methylation changes in Fuchs endothelial corneal dystrophy. Plos One. 12: e0175112. PMID 28384203 DOI: 10.1371/Journal.Pone.0175112 |
0.525 |
|
| 2017 |
Liang G, Weisenberger DJ. DNA methylation aberrancies as a guide for surveillance and treatment of human cancers. Epigenetics. 0. PMID 28358281 DOI: 10.1080/15592294.2017.1311434 |
0.567 |
|
| 2017 |
Weisenberger DJ. A Clinically Distinct and 'Atypical' Subgroup of Head and Neck Cancers Positive for a CpG Island Methylator Phenotype. Ebiomedicine. PMID 28284815 DOI: 10.1016/J.Ebiom.2017.03.008 |
0.437 |
|
| 2017 |
Azad NS, El-Khoueiry A, Yin J, Oberg AL, Flynn P, Adkins D, Sharma A, Weisenberger DJ, Brown T, Medvari P, Jones PA, Easwaran H, Kamel I, Bahary N, Kim G, et al. Combination epigenetic therapy in metastatic colorectal cancer (mCRC) with subcutaneous 5-azacitidine and entinostat; a phase 2 consortium/stand Up 2 cancer study. Oncotarget. PMID 28186961 DOI: 10.18632/Oncotarget.15108 |
0.406 |
|
| 2017 |
Mundbjerg K, Chopra S, Alemozaffar M, Duymich C, Lakshminarasimhan R, Nichols PW, Aron M, Siegmund KD, Ukimura O, Aron M, Stern M, Gill P, Carpten JD, Ørntoft TF, Sørensen KD, ... Weisenberger DJ, et al. Identifying aggressive prostate cancer foci using a DNA methylation classifier. Genome Biology. 18: 3. PMID 28081708 DOI: 10.1186/S13059-016-1129-3 |
0.377 |
|
| 2016 |
Connolly R, Li H, Jankowitz RC, Zhang Z, Rudek MA, Jeter SC, Slater S, Powers P, Wolff AC, Fetting JH, Brufsky AM, Piekarz R, Ahuja N, Laird PW, Shen H, ... Weisenberger DJ, et al. Combination Epigenetic Therapy in Advanced Breast Cancer with 5-Azacitidine and Entinostat: A Phase II National Cancer Institute/Stand Up to Cancer Study. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 27979916 DOI: 10.1158/1078-0432.Ccr-16-1729 |
0.373 |
|
| 2016 |
Li HT, Duymich CE, Weisenberger DJ, Liang G. Genetic and Epigenetic Alterations in Bladder Cancer. International Neurourology Journal. 20: S84-94. PMID 27915480 DOI: 10.5213/Inj.1632752.376 |
0.41 |
|
| 2016 |
Hassler MR, Pulverer W, Lakshminarasimhan R, Redl E, Hacker J, Garland GD, Merkel O, Schiefer AI, Simonitsch-Klupp I, Kenner L, Weisenberger DJ, Weinhaeusel A, Turner SD, Egger G. Insights into the Pathogenesis of Anaplastic Large-Cell Lymphoma through Genome-wide DNA Methylation Profiling. Cell Reports. 17: 596-608. PMID 27705804 DOI: 10.1016/J.Celrep.2016.09.018 |
0.543 |
|
| 2016 |
Chopra S, Liu J, Alemozaffar M, Nichols PW, Aron M, Weisenberger DJ, Collings CK, Syan S, Hu B, Desai M, Aron M, Duddalwar V, Gill I, Liang G, Siegmund KD. Improving needle biopsy accuracy in small renal mass using tumor-specific DNA methylation markers. Oncotarget. PMID 27690297 DOI: 10.18632/Oncotarget.12276 |
0.349 |
|
| 2016 |
Kim SE, Hinoue T, Kim MS, Sohn KJ, Cho RC, Weisenberger DJ, Laird PW, Kim YI. Effects of folylpolyglutamate synthase modulation on global and gene-specific DNA methylation and gene expression in human colon and breast cancer cells. The Journal of Nutritional Biochemistry. 29: 27-35. PMID 26895662 DOI: 10.1016/J.Jnutbio.2015.10.019 |
0.555 |
|
| 2016 |
Savio AJ, Daftary D, Dicks E, Buchanan DD, Parfrey PS, Young JP, Weisenberger D, Green RC, Gallinger S, McLaughlin JR, Knight JA, Bapat B. Promoter methylation of ITF2, but not APC, is associated with microsatellite instability in two populations of colorectal cancer patients. Bmc Cancer. 16: 113. PMID 26884349 DOI: 10.1186/S12885-016-2149-9 |
0.49 |
|
| 2016 |
Becket E, Chopra S, Duymich CE, Lin JJ, You JS, Pandiyan K, Nichols PW, Siegmund KD, Charlet J, Weisenberger DJ, Jones PA, Liang G. Identification of DNA methylation-independent epigenetic events underlying clear cell renal cell carcinoma. Cancer Research. PMID 26759245 DOI: 10.1158/0008-5472.Can-15-2622 |
0.569 |
|
| 2016 |
Bock C, Halbritter F, Carmona FJ, Tierling S, Datlinger P, Assenov Y, Berdasco M, Bergmann AK, Booher K, Busato F, Campan M, Dahl C, Dahmcke CM, Diep D, Fernández AF, ... ... Weisenberger DJ, et al. Quantitative comparison of DNA methylation assays for biomarker development and clinical applications Nature Biotechnology. 34: 726-737. DOI: 10.1038/Nbt.3605 |
0.45 |
|
| 2016 |
Liang G, Mundbjerg K, Chopra S, Alemozaffar M, Duymich C, Nichols P, Aron M, Siegmund K, Ukimura O, Ørntoft T, Sørensen K, Weisenberger D, Jones P, Gill I. S&T-61 NOVEL DNA METHYLATION APPROACH IDENTIFIES THE AGGRESSIVENESS OF FOCI IN MULTIFOCAL PROSTATE CANCER Journal of Urology. 195. DOI: 10.1016/J.Juro.2016.02.2890 |
0.315 |
|
| 2015 |
Ryland KE, Hawkins AG, Weisenberger DJ, Punj V, Borinstein SC, Laird PW, Martens JR, Lawlor ER. Promoter Methylation Analysis Reveals that KCNA5 Ion Channel Silencing Supports Ewing Sarcoma Cell Proliferation. Molecular Cancer Research : McR. PMID 26573141 DOI: 10.1158/1541-7786.Mcr-15-0343 |
0.49 |
|
| 2015 |
Levine AJ, Phipps AI, Baron JA, Buchanan DD, Ahnen DJ, Cohen S, Lindor NM, Newcomb PA, Rosty C, Haile RW, Laird PW, Weisenberger DJ. Clinicopathological risk factor distributions for MLH1 promoter region methylation in CIMP positive tumors. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 26512054 DOI: 10.1158/1055-9965.Epi-15-0935 |
0.53 |
|
| 2015 |
Graham RP, Vierkant RA, Tillmans LS, Wang AH, Laird PW, Weisenberger DJ, Lynch CF, French AJ, Slager SL, Raissian Y, Garcia JJ, Kerr SE, Eun Lee H, Thibodeau SN, Cerhan JR, et al. Tumor Budding in Colorectal Carcinoma: Confirmation of Prognostic Significance and Histologic Cutoff in a Population-based Cohort. The American Journal of Surgical Pathology. PMID 26200097 DOI: 10.1097/Pas.0000000000000504 |
0.341 |
|
| 2015 |
Weisenberger DJ, Levine AJ, Long TI, Buchanan DD, Walters R, Clendenning M, Rosty C, Joshi AD, Stern MC, Le Marchand L, Lindor NM, Daftary D, Gallinger S, Selander T, Bapat B, et al. Association of the colorectal CpG island methylator phenotype with molecular features, risk factors, and family history. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 24: 512-9. PMID 25587051 DOI: 10.1158/1055-9965.Epi-14-1161 |
0.503 |
|
| 2015 |
Kim SE, Hinoue T, Kim MS, Sohn KJ, Cho RC, Cole PD, Weisenberger DJ, Laird PW, Kim YI. γ-Glutamyl hydrolase modulation significantly influences global and gene-specific DNA methylation and gene expression in human colon and breast cancer cells. Genes & Nutrition. 10: 444. PMID 25502219 DOI: 10.1007/S12263-014-0444-0 |
0.557 |
|
| 2015 |
Phipps AI, Limburg PJ, Baron JA, Burnett-Hartman AN, Weisenberger DJ, Laird PW, Sinicrope FA, Rosty C, Buchanan DD, Potter JD, Newcomb PA. Association between molecular subtypes of colorectal cancer and patient survival. Gastroenterology. 148: 77-87.e2. PMID 25280443 DOI: 10.1053/J.Gastro.2014.09.038 |
0.367 |
|
| 2015 |
Weisenberger DJ, Liang G. Contributions of DNA methylation aberrancies in shaping the cancer epigenome Translational Cancer Research. 4: 219-234. DOI: 10.21037/4482 |
0.572 |
|
| 2015 |
Wang J, Hwang A, Weisenberger D, Van Den Berg DJ, Cortessis VK, Epeldegui M, Martinez-Maza O, Triche TJ, Hamilton AS, Nathwani BN, Conti DV, Horvath S, Mack TM, Cozen W. DNA Methylation Differences in Twins Discordant for Adolescent/Young Adult Hodgkin Lymphoma Blood. 126: 179-179. DOI: 10.1182/Blood.V126.23.179.179 |
0.535 |
|
| 2015 |
Ryland K, Hawkins A, Weisenberger DJ, Borinstein S, Laird PW, Martens JR, Lawlor ER. Abstract 3288: The KCNA5 promoter is hypermethylated in Ewing sarcoma and silencing contributes to cell proliferation Cancer Research. 75: 3288-3288. DOI: 10.1158/1538-7445.Am2015-3288 |
0.462 |
|
| 2014 |
Ling C, Pease M, Shi L, Punj V, Shiroishi MS, Commins D, Weisenberger DJ, Wang K, Zada G. A pilot genome-scale profiling of DNA methylation in sporadic pituitary macroadenomas: association with tumor invasion and histopathological subtype. Plos One. 9: e96178. PMID 24781529 DOI: 10.1371/Journal.Pone.0096178 |
0.501 |
|
| 2014 |
Weisenberger DJ. Characterizing DNA methylation alterations from The Cancer Genome Atlas. The Journal of Clinical Investigation. 124: 17-23. PMID 24382385 DOI: 10.1172/Jci69740 |
0.54 |
|
| 2014 |
Phipps AI, Limburg PJ, Baron JA, Burnett-Hartman AN, Weisenberger DJ, Laird PW, Sinicrope FA, Rosty C, Buchanan DD, Potter JD, Newcomb PA. Molecular subtypes of colorectal cancer in relation to disease survival. Journal of Clinical Oncology. 32: 451-451. DOI: 10.1200/Jco.2014.32.3_Suppl.451 |
0.385 |
|
| 2014 |
Capone S, Triche TJ, In G, Weisenberger DJ, Berman BP, Ramsingh G. Whole-genome bisulfite sequencing of a complex karyotype AML and identification of regulatory aberrations distinct from normal karyotype AML. Journal of Clinical Oncology. 32: 11075-11075. DOI: 10.1200/Jco.2014.32.15_Suppl.11075 |
0.312 |
|
| 2014 |
Pease M, Ling C, Shi L, Punj V, Shiroishi M, Cummins D, Weisenberger D, Wang K, Zada G. Genome-Scale Profiling of DNA Methylation in Sporadic Pituitary Macroadenomas: Association with Tumor Invasion and Histopathological Subtype Skull Base Surgery. 75. DOI: 10.1055/S-0034-1370513 |
0.479 |
|
| 2013 |
Wrangle J, Wang W, Koch A, Easwaran H, Mohammad HP, Vendetti F, Vancriekinge W, Demeyer T, Du Z, Parsana P, Rodgers K, Yen RW, Zahnow CA, Taube JM, Brahmer JR, ... ... Weisenberger DJ, et al. Alterations of immune response of Non-Small Cell Lung Cancer with Azacytidine. Oncotarget. 4: 2067-79. PMID 24162015 DOI: 10.18632/Oncotarget.1542 |
0.352 |
|
| 2013 |
Brennan CW, Verhaak RG, McKenna A, Campos B, Noushmehr H, Salama SR, Zheng S, Chakravarty D, Sanborn JZ, Berman SH, Beroukhim R, Bernard B, Wu CJ, Genovese G, Shmulevich I, ... ... Weisenberger DJ, et al. The somatic genomic landscape of glioblastoma. Cell. 155: 462-77. PMID 24120142 DOI: 10.1016/J.Cell.2013.09.034 |
0.442 |
|
| 2013 |
Choi IS, Yu K, Kim J, De Guzman E, Weisenberger DJ, Oghamian S, Kim HJ, Lee KH, Carroll C, Trinh BN, Kim M, Houshdaran S, Laird PW, Jones PA, Warburton D, et al. Alterations in deoxyribonucleic acid (DNA) methylation patterns of Calca, Timp3, Mmp2, and Igf2r are associated with chronic cystitis in a cyclophosphamide-induced mouse model. Urology. 82: 253.e9-15. PMID 23806407 DOI: 10.1016/J.Urology.2013.04.010 |
0.458 |
|
| 2013 |
Samadder NJ, Vierkant RA, Tillmans LS, Wang AH, Weisenberger DJ, Laird PW, Lynch CF, Anderson KE, French AJ, Haile RW, Potter JD, Slager SL, Smyrk TC, Thibodeau SN, Cerhan JR, et al. Associations between colorectal cancer molecular markers and pathways with clinicopathologic features in older women. Gastroenterology. 145: 348-56.e1-2. PMID 23665275 DOI: 10.1053/J.Gastro.2013.05.001 |
0.404 |
|
| 2013 |
Triche TJ, Weisenberger DJ, Van Den Berg D, Laird PW, Siegmund KD. Low-level processing of Illumina Infinium DNA Methylation BeadArrays. Nucleic Acids Research. 41: e90. PMID 23476028 DOI: 10.1093/Nar/Gkt090 |
0.31 |
|
| 2013 |
Gertych A, Oh JH, Wawrowsky KA, Weisenberger DJ, Tajbakhsh J. 3-D DNA methylation phenotypes correlate with cytotoxicity levels in prostate and liver cancer cell models. Bmc Pharmacology & Toxicology. 14: 11. PMID 23394161 DOI: 10.1186/2050-6511-14-11 |
0.469 |
|
| 2013 |
Gao F, Shi L, Russin J, Zeng L, Chang X, He S, Chen TC, Giannotta SL, Weisenberger DJ, Zada G, Mack WJ, Wang K. DNA methylation in the malignant transformation of meningiomas. Plos One. 8: e54114. PMID 23349797 DOI: 10.1371/Journal.Pone.0054114 |
0.498 |
|
| 2013 |
Loo LW, Tiirikainen M, Cheng I, Lum-Jones A, Seifried A, Church JM, Gryfe R, Weisenberger DJ, Lindor NM, Gallinger S, Haile RW, Duggan DJ, Thibodeau SN, Casey G, Le Marchand L. Integrated analysis of genome-wide copy number alterations and gene expression in microsatellite stable, CpG island methylator phenotype-negative colon cancer. Genes, Chromosomes & Cancer. 52: 450-66. PMID 23341073 DOI: 10.1002/Gcc.22043 |
0.352 |
|
| 2013 |
Singh S, Vierkant R, Tillmans L, Wang A, Weisenberger D, Laird P, Inoue-Choi M, Mariani A, Lynch C, Anderson K, French A, Haile R, Potter J, Slager S, Smyrk T, et al. Tea and Chocolate Consumption and Colorectal Cancer Risk by Molecularly Defined Subtypes in a Prospective Cohort Study of Older Women: Presidential Poster American Journal of Gastroenterology. 108: S635-S636. DOI: 10.14309/00000434-201310001-02094 |
0.32 |
|
| 2013 |
Singh S, Vierkant R, Tillmans L, Wang A, Weisenberger D, Laird P, Inoue-Choi M, Mariani A, Lynch C, Anderson K, French A, Haile R, Harnack L, Potter J, Slager S, et al. Abstract A44: Coffee consumption and colorectal cancer risk by molecularly defined subtypes in a prospective cohort study of older women Cancer Prevention Research. 6. DOI: 10.1158/1940-6215.Prev-13-A44 |
0.325 |
|
| 2013 |
Yang X, Han H, Treppendahl MB, Tsai YC, O'Connell C, Weisenberger D, Lay F, Grønbæk K, Liang G, Jones PA. Abstract 4624: Identification of novel DNA methylation markers to track patient's response to DNA demethylation agents. Cancer Research. 73: 4624-4624. DOI: 10.1158/1538-7445.Am2013-4624 |
0.557 |
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| 2012 |
Lange CP, Campan M, Hinoue T, Schmitz RF, van der Meulen-de Jong AE, Slingerland H, Kok PJ, van Dijk CM, Weisenberger DJ, Shen H, Tollenaar RA, Laird PW. Genome-scale discovery of DNA-methylation biomarkers for blood-based detection of colorectal cancer. Plos One. 7: e50266. PMID 23209692 DOI: 10.1371/Journal.Pone.0050266 |
0.485 |
|
| 2012 |
Razzak AA, Oxentenko AS, Vierkant RA, Tillmans LS, Wang AH, Weisenberger DJ, Laird PW, Lynch CF, Anderson KE, French AJ, Haile RW, Harnack LJ, Potter JD, Slager SL, Smyrk TC, et al. Associations between intake of folate and related micronutrients with molecularly defined colorectal cancer risks in the Iowa Women's Health Study. Nutrition and Cancer. 64: 899-910. PMID 23061900 DOI: 10.1080/01635581.2012.714833 |
0.345 |
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| 2012 |
Easwaran H, Johnstone SE, Van Neste L, Ohm J, Mosbruger T, Wang Q, Aryee MJ, Joyce P, Ahuja N, Weisenberger D, Collisson E, Zhu J, Yegnasubramanian S, Matsui W, Baylin SB. A DNA hypermethylation module for the stem/progenitor cell signature of cancer. Genome Research. 22: 837-49. PMID 22391556 DOI: 10.1101/Gr.131169.111 |
0.501 |
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| 2012 |
Loo LW, Cheng I, Tiirikainen M, Lum-Jones A, Seifried A, Dunklee LM, Church JM, Gryfe R, Weisenberger DJ, Haile RW, Gallinger S, Duggan DJ, Thibodeau SN, Casey G, Le Marchand L. cis-Expression QTL analysis of established colorectal cancer risk variants in colon tumors and adjacent normal tissue. Plos One. 7: e30477. PMID 22363440 DOI: 10.1371/Journal.Pone.0030477 |
0.371 |
|
| 2012 |
Levine AJ, Win AK, Buchanan DD, Jenkins MA, Baron JA, Young JP, Long TI, Weisenberger DJ, Laird PW, McCall RL, Duggan DJ, Haile RW. Cancer risks for the relatives of colorectal cancer cases with a methylated MLH1 promoter region: data from the Colorectal Cancer Family Registry. Cancer Prevention Research (Philadelphia, Pa.). 5: 328-35. PMID 22144422 DOI: 10.1158/1940-6207.Capr-11-0419 |
0.45 |
|
| 2012 |
Berman BP, Weisenberger DJ, Aman JF, Hinoue T, Ramjan Z, Liu Y, Noushmehr H, Lange CP, van Dijk CM, Tollenaar RA, Van Den Berg D, Laird PW. Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains. Nature Genetics. 44: 40-6. PMID 22120008 DOI: 10.1038/Ng.969 |
0.522 |
|
| 2012 |
Limsui D, Vierkant RA, Tillmans LS, Wang AH, Weisenberger DJ, Laird PW, Lynch CF, Anderson KE, French AJ, Haile RW, Harnack LJ, Potter JD, Slager SL, Smyrk TC, Thibodeau SN, et al. Postmenopausal hormone therapy and colorectal cancer risk by molecularly defined subtypes among older women. Gut. 61: 1299-305. PMID 22027477 DOI: 10.1136/Gutjnl-2011-300719 |
0.315 |
|
| 2012 |
Hinoue T, Weisenberger DJ, Lange CP, Shen H, Byun HM, Van Den Berg D, Malik S, Pan F, Noushmehr H, van Dijk CM, Tollenaar RA, Laird PW. Genome-scale analysis of aberrant DNA methylation in colorectal cancer. Genome Research. 22: 271-82. PMID 21659424 DOI: 10.1101/gr.117523.110 |
0.486 |
|
| 2012 |
Berman BP, Weisenberger DJ, Hinoue T, Noushmehr H, Liu Y, Aman JF, Hinoue T, Shen H, Malik S, Mahurkar S, Triche T, Ramjan Z, Nicolet CM, Van Den Berg D, Cope L, et al. Exploring the cancer methylome Bmc Proceedings. 6. DOI: 10.1186/1753-6561-6-S6-O24 |
0.569 |
|
| 2012 |
Sammader NJ, Vierkant RA, Tillmans LS, Wang AH, Weisenberger DJ, Laird PW, Lynch CF, Anderson KE, French AJ, Haile RW, Harnack LJ, Potter JD, Slager SL, Smyrk TC, Thibodeau SN, et al. Abstract 5518: Clinicopathologic associations with colorectal cancer molecular pathways in a cohort study of older women: Epidemiology. 72: 5518-5518. DOI: 10.1158/1538-7445.Am2012-5518 |
0.34 |
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| 2012 |
Vierkant RA, Tillmans LS, Wang AH, Samadder NJ, Weisenberger DJ, Laird PW, Lynch CF, Anderson KE, French AJ, Haile RW, Harnack LJ, Potter JD, Slager SL, Smyrk TC, Thibodeau SN, et al. Abstract 4492: Colorectal cancer survival by molecular subtypes in a population-based cohort of older women Cancer Research. 72: 4492-4492. DOI: 10.1158/1538-7445.Am2012-4492 |
0.394 |
|
| 2011 |
Amps K, Andrews PW, Anyfantis G, Armstrong L, Avery S, Baharvand H, Baker J, Baker D, Munoz MB, Beil S, Benvenisty N, Ben-Yosef D, Biancotti JC, Bosman A, ... ... Weisenberger DJ, et al. Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage. Nature Biotechnology. 29: 1132-44. PMID 22119741 DOI: 10.1038/Nbt.2051 |
0.312 |
|
| 2011 |
Wang X, Kang GH, Campan M, Weisenberger DJ, Long TI, Cozen W, Bernstein L, Wu AH, Siegmund KD, Shibata D, Laird PW. Epigenetic subgroups of esophageal and gastric adenocarcinoma with differential GATA5 DNA methylation associated with clinical and lifestyle factors. Plos One. 6: e25985. PMID 22028801 DOI: 10.1371/Journal.Pone.0025985 |
0.478 |
|
| 2011 |
Razzak AA, Oxentenko AS, Vierkant RA, Tillmans LS, Wang AH, Weisenberger DJ, Laird PW, Lynch CF, Anderson KE, French AJ, Haile RW, Harnack LJ, Slager SL, Smyrk TC, Thibodeau SN, et al. Alcohol intake and colorectal cancer risk by molecularly defined subtypes in a prospective study of older women. Cancer Prevention Research (Philadelphia, Pa.). 4: 2035-43. PMID 21900595 DOI: 10.1158/1940-6207.Capr-11-0276 |
0.301 |
|
| 2011 |
Rakovski C, Weisenberger DJ, Marjoram P, Laird PW, Siegmund KD. Modeling measurement error in tumor characterization studies. Bmc Bioinformatics. 12: 284. PMID 21752297 DOI: 10.1186/1471-2105-12-284 |
0.513 |
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| 2011 |
Rumilla K, Schowalter KV, Lindor NM, Thomas BC, Mensink KA, Gallinger S, Holter S, Newcomb PA, Potter JD, Jenkins MA, Hopper JL, Long TI, Weisenberger DJ, Haile RW, Casey G, et al. Frequency of deletions of EPCAM (TACSTD1) in MSH2-associated Lynch syndrome cases. The Journal of Molecular Diagnostics : Jmd. 13: 93-9. PMID 21227399 DOI: 10.1016/J.Jmoldx.2010.11.011 |
0.37 |
|
| 2011 |
Hinoue T, Weisenberger DJ, Lange CPE, Noushmehr H, Byun H, Dijk CMv, Pan F, Malik S, Berg DJVD, Shen H, Tollenaar RAEM, Laird PW. Abstract LB-173: Genome-scale analysis of aberrant DNA methylation in colorectal cancer Cancer Research. 71. DOI: 10.1158/1538-7445.Am2011-Lb-173 |
0.571 |
|
| 2011 |
Kim S, Hinoue T, Weisenberger D, Sohn K, Cho RC, Laird PW, Kim Y. Abstract 1620: Effects of γ-glutamyl hydrolase and folylpolyglutamyl synthase modulation on gene-specific promoter CpG island methylation Cancer Research. 71: 1620-1620. DOI: 10.1158/1538-7445.Am2011-1620 |
0.539 |
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| 2010 |
Wolff EM, Chihara Y, Pan F, Weisenberger DJ, Siegmund KD, Sugano K, Kawashima K, Laird PW, Jones PA, Liang G. Unique DNA methylation patterns distinguish noninvasive and invasive urothelial cancers and establish an epigenetic field defect in premalignant tissue. Cancer Research. 70: 8169-78. PMID 20841482 DOI: 10.1158/0008-5472.Can-10-1335 |
0.493 |
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| 2010 |
Noushmehr H, Weisenberger DJ, Diefes K, Phillips HS, Pujara K, Berman BP, Pan F, Pelloski CE, Sulman EP, Bhat KP, Verhaak RG, Hoadley KA, Hayes DN, Perou CM, Schmidt HK, et al. Identification of a CpG island methylator phenotype that defines a distinct subgroup of glioma. Cancer Cell. 17: 510-22. PMID 20399149 DOI: 10.1016/J.Ccr.2010.03.017 |
0.453 |
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| 2010 |
Teschendorff AE, Menon U, Gentry-Maharaj A, Ramus SJ, Weisenberger DJ, Shen H, Campan M, Noushmehr H, Bell CG, Maxwell AP, Savage DA, Mueller-Holzner E, Marth C, Kocjan G, Gayther SA, et al. Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer. Genome Research. 20: 440-6. PMID 20219944 DOI: 10.1101/Gr.103606.109 |
0.48 |
|
| 2010 |
Cozen W, Wang J, Siegmund K, Triche T, Weisenberger D, Berg DVD, Hamilton A, Hwang A, Mack TM. Abstract 155: A comparison of DNA methylation in identical twins discordant for Hodgkin lymphoma Cancer Research. 70: 155-155. DOI: 10.1158/1538-7445.Am10-155 |
0.552 |
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| 2009 |
Hinoue T, Weisenberger DJ, Pan F, Campan M, Kim M, Young J, Whitehall VL, Leggett BA, Laird PW. Analysis of the association between CIMP and BRAF in colorectal cancer by DNA methylation profiling. Plos One. 4: e8357. PMID 20027224 DOI: 10.1371/Journal.Pone.0008357 |
0.566 |
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| 2009 |
Byun HM, Siegmund KD, Pan F, Weisenberger DJ, Kanel G, Laird PW, Yang AS. Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue- and individual-specific DNA methylation patterns. Human Molecular Genetics. 18: 4808-17. PMID 19776032 DOI: 10.1093/Hmg/Ddp445 |
0.54 |
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| 2009 |
Boks MP, Derks EM, Weisenberger DJ, Strengman E, Janson E, Sommer IE, Kahn RS, Ophoff RA. The relationship of DNA methylation with age, gender and genotype in twins and healthy controls. Plos One. 4: e6767. PMID 19774229 DOI: 10.1371/Journal.Pone.0006767 |
0.524 |
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| 2009 |
Aparicio A, North B, Barske L, Wang X, Bollati V, Weisenberger D, Yoo C, Tannir N, Horne E, Groshen S, Jones P, Yang A, Issa JP. LINE-1 methylation in plasma DNA as a biomarker of activity of DNA methylation inhibitors in patients with solid tumors. Epigenetics. 4: 176-84. PMID 19421002 DOI: 10.4161/Epi.4.3.8694 |
0.497 |
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| 2009 |
Berman BP, Weisenberger DJ, Laird PW. Locking in on the human methylome. Nature Biotechnology. 27: 341-2. PMID 19352369 DOI: 10.1038/Nbt0409-341 |
0.358 |
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| 2009 |
Sohn KJ, Jang H, Campan M, Weisenberger DJ, Dickhout J, Wang YC, Cho RC, Yates Z, Lucock M, Chiang EP, Austin RC, Choi SW, Laird PW, Kim YI. The methylenetetrahydrofolate reductase C677T mutation induces cell-specific changes in genomic DNA methylation and uracil misincorporation: a possible molecular basis for the site-specific cancer risk modification. International Journal of Cancer. Journal International Du Cancer. 124: 1999-2005. PMID 19123462 DOI: 10.1002/Ijc.24003 |
0.49 |
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| 2009 |
Campan M, Weisenberger DJ, Trinh B, Laird PW. MethyLight. Methods in Molecular Biology (Clifton, N.J.). 507: 325-37. PMID 18987824 DOI: 10.1007/978-1-59745-522-0_23 |
0.309 |
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| 2009 |
Byun H, Triche T, Kim H, Kim HN, Kim Y, Lee I, Ahn J, Lee J, Yang D, Kook H, Hwang TJ, Laird PW, Weisenberger D, Yang AS. Genome-Wide DNA Methylation Analysis of Patients with Myelodysplastic Syndrome After Azacitidine Treatment. Blood. 114: 600-600. DOI: 10.1182/Blood.V114.22.600.600 |
0.51 |
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| 2009 |
Limsui D, Vierkant RA, Tillmans LS, Wang AH, Weisenberger DJ, Laird PW, Lynch CF, Anderson KE, French AJ, Haile RW, Harnack LJ, Potter JD, Slager S, Smyrk TC, Thibodeau SN, et al. S1950 Folate Intake and Colorectal Cancer Risks By CIMP and BRAF-Mutation Status Among Older Women Gastroenterology. 136: A-299-A-300. DOI: 10.1016/S0016-5085(09)61366-4 |
0.326 |
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| 2008 |
Poynter JN, Siegmund KD, Weisenberger DJ, Long TI, Thibodeau SN, Lindor N, Young J, Jenkins MA, Hopper JL, Baron JA, Buchanan D, Casey G, Levine AJ, Le Marchand L, Gallinger S, et al. Molecular characterization of MSI-H colorectal cancer by MLHI promoter methylation, immunohistochemistry, and mismatch repair germline mutation screening. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 17: 3208-15. PMID 18990764 DOI: 10.1158/1055-9965.Epi-08-0512 |
0.436 |
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| 2008 |
Weisenberger DJ, Trinh BN, Campan M, Sharma S, Long TI, Ananthnarayan S, Liang G, Esteva FJ, Hortobagyi GN, McCormick F, Jones PA, Laird PW. DNA methylation analysis by digital bisulfite genomic sequencing and digital MethyLight. Nucleic Acids Research. 36: 4689-98. PMID 18628296 DOI: 10.1093/nar/gkn455 |
0.419 |
|
| 2008 |
Anglim PP, Galler JS, Koss MN, Hagen JA, Turla S, Campan M, Weisenberger DJ, Laird PW, Siegmund KD, Laird-Offringa IA. Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer. Molecular Cancer. 7: 62. PMID 18616821 DOI: 10.1186/1476-4598-7-62 |
0.504 |
|
| 2008 |
Pike BL, Greiner TC, Wang X, Weisenburger DD, Hsu YH, Renaud G, Wolfsberg TG, Kim M, Weisenberger DJ, Siegmund KD, Ye W, Groshen S, Mehrian-Shai R, Delabie J, Chan WC, et al. DNA methylation profiles in diffuse large B-cell lymphoma and their relationship to gene expression status. Leukemia. 22: 1035-43. PMID 18288132 DOI: 10.1038/Leu.2008.18 |
0.512 |
|
| 2008 |
Kang GH, Lee S, Cho NY, Gandamihardja T, Long TI, Weisenberger DJ, Campan M, Laird PW. DNA methylation profiles of gastric carcinoma characterized by quantitative DNA methylation analysis. Laboratory Investigation; a Journal of Technical Methods and Pathology. 88: 161-70. PMID 18158559 DOI: 10.1038/Labinvest.3700707 |
0.54 |
|
| 2007 |
Siegmund KD, Connor CM, Campan M, Long TI, Weisenberger DJ, Biniszkiewicz D, Jaenisch R, Laird PW, Akbarian S. DNA methylation in the human cerebral cortex is dynamically regulated throughout the life span and involves differentiated neurons. Plos One. 2: e895. PMID 17878930 DOI: 10.1371/Journal.Pone.0000895 |
0.483 |
|
| 2007 |
Widschwendter M, Fiegl H, Egle D, Mueller-Holzner E, Spizzo G, Marth C, Weisenberger DJ, Campan M, Young J, Jacobs I, Laird PW. Epigenetic stem cell signature in cancer. Nature Genetics. 39: 157-8. PMID 17200673 DOI: 10.1038/Ng1941 |
0.381 |
|
| 2006 |
Campan M, Weisenberger DJ, Laird PW. DNA methylation profiles of female steroid hormone-driven human malignancies Current Topics in Microbiology and Immunology. 310: 141-178. PMID 16909910 DOI: 10.1007/3-540-31181-5_8 |
0.577 |
|
| 2006 |
Weisenberger DJ, Siegmund KD, Campan M, Young J, Long TI, Faasse MA, Kang GH, Widschwendter M, Weener D, Buchanan D, Koh H, Simms L, Barker M, Leggett B, Levine J, et al. CpG island methylator phenotype underlies sporadic microsatellite instability and is tightly associated with BRAF mutation in colorectal cancer. Nature Genetics. 38: 787-93. PMID 16804544 DOI: 10.1038/Ng1834 |
0.515 |
|
| 2006 |
Ogino S, Kawasaki T, Brahmandam M, Cantor M, Kirkner GJ, Spiegelman D, Makrigiorgos GM, Weisenberger DJ, Laird PW, Loda M, Fuchs CS. Precision and performance characteristics of bisulfite conversion and real-time PCR (MethyLight) for quantitative DNA methylation analysis. The Journal of Molecular Diagnostics : Jmd. 8: 209-17. PMID 16645207 DOI: 10.2353/Jmoldx.2006.050135 |
0.542 |
|
| 2006 |
Ehrlich M, Woods CB, Yu MC, Dubeau L, Yang F, Campan M, Weisenberger DJ, Long T, Youn B, Fiala ES, Laird PW. Quantitative analysis of associations between DNA hypermethylation, hypomethylation, and DNMT RNA levels in ovarian tumors. Oncogene. 25: 2636-45. PMID 16532039 DOI: 10.1038/Sj.Onc.1209145 |
0.524 |
|
| 2006 |
Ogino S, Cantor M, Kawasaki T, Brahmandam M, Kirkner GJ, Weisenberger DJ, Campan M, Laird PW, Loda M, Fuchs CS. CpG island methylator phenotype (CIMP) of colorectal cancer is best characterised by quantitative DNA methylation analysis and prospective cohort studies Gut. 55: 1000-1006. PMID 16407376 DOI: 10.1136/Gut.2005.082933 |
0.563 |
|
| 2006 |
Weisenberger DJ, Campan M, Long TI, Laird PW. Determination of the CpG Island Methylator Phenotype (CIMP) in colorectal cancer using MethyLight Nature Protocols. DOI: 10.1038/Nprot.2006.152 |
0.496 |
|
| 2006 |
Tsou J, Galler J, Wali A, Pass H, Siegmund K, Ye W, Groshen S, Weisenberger D, Campan M, Laird P, Turla S, Koss M, Laird-Offringa I. 147 DNA methylation profile of 28 candidate marker loci in malignant mesothelioma Lung Cancer. 54: S36. DOI: 10.1016/S0169-5002(07)70223-4 |
0.515 |
|
| 2005 |
Weisenberger DJ, Campan M, Long TI, Kim M, Woods C, Fiala E, Ehrlich M, Laird PW. Analysis of repetitive element DNA methylation by MethyLight. Nucleic Acids Research. 33: 6823-36. PMID 16326863 DOI: 10.1093/Nar/Gki987 |
0.546 |
|
| 2005 |
Fatemi M, Pao MM, Jeong S, Gal-Yam EN, Egger G, Weisenberger DJ, Jones PA. Footprinting of mammalian promoters: use of a CpG DNA methyltransferase revealing nucleosome positions at a single molecule level. Nucleic Acids Research. 33: e176. PMID 16314307 DOI: 10.1093/Nar/Gni180 |
0.432 |
|
| 2005 |
Friedrich MG, Chandrasoma S, Siegmund KD, Weisenberger DJ, Cheng JC, Toma MI, Huland H, Jones PA, Liang G. Prognostic relevance of methylation markers in patients with non-muscle invasive bladder carcinoma. European Journal of Cancer (Oxford, England : 1990). 41: 2769-78. PMID 16242928 DOI: 10.1016/J.Ejca.2005.07.019 |
0.489 |
|
| 2005 |
Woodson K, Weisenberger DJ, Campan M, Laird PW, Tangrea J, Johnson LL, Schatzkin A, Lanza E. Gene-specific methylation and subsequent risk of colorectal adenomas among participants of the polyp prevention trial. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 14: 1219-23. PMID 15894675 DOI: 10.1158/1055-9965.Epi-04-0726 |
0.493 |
|
| 2004 |
Friedrich MG, Weisenberger DJ, Cheng JC, Chandrasoma S, Siegmund KD, Gonzalgo ML, Toma MI, Huland H, Yoo C, Tsai YC, Nichols PW, Bochner BH, Jones PA, Liang G. Detection of methylated apoptosis-associated genes in urine sediments of bladder cancer patients. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 10: 7457-65. PMID 15569975 DOI: 10.1158/1078-0432.Ccr-04-0930 |
0.551 |
|
| 2004 |
Cheng JC, Yoo CB, Weisenberger DJ, Chuang J, Wozniak C, Liang G, Marquez VE, Greer S, Orntoft TF, Thykjaer T, Jones PA. Preferential response of cancer cells to zebularine. Cancer Cell. 6: 151-8. PMID 15324698 DOI: 10.1016/J.Ccr.2004.06.023 |
0.531 |
|
| 2004 |
Liang G, Lin JC, Wei V, Yoo C, Cheng JC, Nguyen CT, Weisenberger DJ, Egger G, Takai D, Gonzales FA, Jones PA. Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome. Proceedings of the National Academy of Sciences of the United States of America. 101: 7357-62. PMID 15123803 DOI: 10.1073/Pnas.0401866101 |
0.397 |
|
| 2004 |
Weisenberger DJ, Velicescu M, Cheng JC, Gonzales FA, Liang G, Jones PA. Role of the DNA methyltransferase variant DNMT3b3 in DNA methylation. Molecular Cancer Research : McR. 2: 62-72. PMID 14757847 |
0.41 |
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| 2004 |
Cheng JC, Weisenberger DJ, Gonzales FA, Liang G, Xu GL, Hu YG, Marquez VE, Jones PA. Continuous zebularine treatment effectively sustains demethylation in human bladder cancer cells. Molecular and Cellular Biology. 24: 1270-8. PMID 14729971 DOI: 10.1128/Mcb.24.3.1270-1278.2004 |
0.502 |
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| 2004 |
Friedrich MG, Liang G, Weisenberger DJ, Cheng JC, Siegmund KD, Toma MI, Huland H, Jones PA. 745: Frequent Methylation of Apoptosis-Associated Genes in Bladder Cancer Cell Lines, Tumor Samples, and Urine Samples for Diagnosis of Bladder Cancer Journal of Urology. 171: 198-198. DOI: 10.1016/s0022-5347(18)37994-1 |
0.336 |
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| 2004 |
Friedrich MG, Liang G, Toma MI, Weisenberger DJ, Cheng JC, Siegmund KD, Huland H, Jones PA. 743: Methylation of the E-Cadherin and the TIMP-3 Genes are Positive Prognostic Markers for Patients with Non-Muscle Invasive Bladder Carcinoma Journal of Urology. 171: 197-197. DOI: 10.1016/S0022-5347(18)37992-8 |
0.348 |
|
| 2002 |
Nguyen CT, Weisenberger DJ, Velicescu M, Gonzales FA, Lin JC, Liang G, Jones PA. Histone H3-lysine 9 methylation is associated with aberrant gene silencing in cancer cells and is rapidly reversed by 5-aza-2'-deoxycytidine. Cancer Research. 62: 6456-61. PMID 12438235 |
0.32 |
|
| 2002 |
Weisenberger DJ, Velicescu M, Preciado-Lopez MA, Gonzales FA, Tsai YC, Liang G, Jones PA. Identification and characterization of alternatively spliced variants of DNA methyltransferase 3a in mammalian cells. Gene. 298: 91-9. PMID 12406579 DOI: 10.1016/S0378-1119(02)00976-9 |
0.384 |
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| 2002 |
Velicescu M, Weisenberger DJ, Gonzales FA, Tsai YC, Nguyen CT, Jones PA. Cell division is required for de novo methylation of CpG islands in bladder cancer cells. Cancer Research. 62: 2378-84. PMID 11956100 |
0.418 |
|
| 1999 |
Weisenberger DJ, Romano LJ. Cytosine methylation in a CpG sequence leads to enhanced reactivity with Benzo[a]pyrene diol epoxide that correlates with a conformational change. The Journal of Biological Chemistry. 274: 23948-55. PMID 10446162 DOI: 10.1074/Jbc.274.34.23948 |
0.708 |
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