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Craig K. Knox, Ph.D. - Publications

Affiliations: 
2010 Chemical Engineering University of Utah, Salt Lake City, UT 
Area:
Chemical Engineering, Physical Chemistry, Materials Science Engineering
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vázquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, ... ... Knox C, et al. HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Research. PMID 29140435 DOI: 10.1093/Nar/Gkx1089  0.395
2017 Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, ... ... Knox C, et al. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Research. PMID 29126136 DOI: 10.1093/Nar/Gkx1037  0.316
2016 Neveu V, Moussy A, Rouaix H, Wedekind R, Pon A, Knox C, Wishart DS, Scalbert A. Exposome-Explorer: a manually-curated database on biomarkers of exposure to dietary and environmental factors. Nucleic Acids Research. PMID 27924041 DOI: 10.1093/Nar/Gkw980  0.301
2016 Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, Wishart DS. ClassyFire: automated chemical classification with a comprehensive, computable taxonomy. Journal of Cheminformatics. 8: 61. PMID 27867422 DOI: 10.1186/S13321-016-0174-Y  0.31
2015 Sajed T, Marcu A, Ramirez M, Pon A, Guo AC, Knox C, Wilson M, Grant JR, Djoumbou Y, Wishart DS. ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli. Nucleic Acids Research. PMID 26481353 DOI: 10.1093/Nar/Gkv1060  0.34
2015 Pon A, Jewison T, Su Y, Liang Y, Knox C, Maciejewski A, Wilson M, Wishart DS. Pathways with PathWhiz. Nucleic Acids Research. 43: W552-9. PMID 25934797 DOI: 10.1093/Nar/Gkv399  0.324
2015 Wishart D, Arndt D, Pon A, Sajed T, Guo AC, Djoumbou Y, Knox C, Wilson M, Liang Y, Grant J, Liu Y, Goldansaz SA, Rappaport SM. T3DB: the toxic exposome database. Nucleic Acids Research. 43: D928-34. PMID 25378312 DOI: 10.1093/Nar/Gku1004  0.345
2014 Law V, Knox C, Djoumbou Y, Jewison T, Guo AC, Liu Y, Maciejewski A, Arndt D, Wilson M, Neveu V, Tang A, Gabriel G, Ly C, Adamjee S, Dame ZT, et al. DrugBank 4.0: shedding new light on drug metabolism. Nucleic Acids Research. 42: D1091-7. PMID 24203711 DOI: 10.1093/Nar/Gkt1068  0.341
2014 Jewison T, Su Y, Disfany FM, Liang Y, Knox C, Maciejewski A, Poelzer J, Huynh J, Zhou Y, Arndt D, Djoumbou Y, Liu Y, Deng L, Guo AC, Han B, et al. SMPDB 2.0: big improvements to the Small Molecule Pathway Database. Nucleic Acids Research. 42: D478-84. PMID 24203708 DOI: 10.1093/Nar/Gkt1067  0.363
2013 Bouatra S, Aziat F, Mandal R, Guo AC, Wilson MR, Knox C, Bjorndahl TC, Krishnamurthy R, Saleem F, Liu P, Dame ZT, Poelzer J, Huynh J, Yallou FS, Psychogios N, et al. The human urine metabolome. Plos One. 8: e73076. PMID 24023812 DOI: 10.1371/Journal.Pone.0073076  0.332
2013 Wishart DS, Jewison T, Guo AC, Wilson M, Knox C, Liu Y, Djoumbou Y, Mandal R, Aziat F, Dong E, Bouatra S, Sinelnikov I, Arndt D, Xia J, Liu P, et al. HMDB 3.0--The Human Metabolome Database in 2013. Nucleic Acids Research. 41: D801-7. PMID 23161693 DOI: 10.1093/Nar/Gks1065  0.369
2013 Guo AC, Jewison T, Wilson M, Liu Y, Knox C, Djoumbou Y, Lo P, Mandal R, Krishnamurthy R, Wishart DS. ECMDB: the E. coli Metabolome Database. Nucleic Acids Research. 41: D625-30. PMID 23109553 DOI: 10.1093/Nar/Gks992  0.378
2012 Rothwell JA, Urpi-Sarda M, Boto-Ordoñez M, Knox C, Llorach R, Eisner R, Cruz J, Neveu V, Wishart D, Manach C, Andres-Lacueva C, Scalbert A. Phenol-Explorer 2.0: a major update of the Phenol-Explorer database integrating data on polyphenol metabolism and pharmacokinetics in humans and experimental animals. Database : the Journal of Biological Databases and Curation. 2012: bas031. PMID 22879444 DOI: 10.1093/Database/Bas031  0.364
2012 Jewison T, Knox C, Neveu V, Djoumbou Y, Guo AC, Lee J, Liu P, Mandal R, Krishnamurthy R, Sinelnikov I, Wilson M, Wishart DS. YMDB: the Yeast Metabolome Database. Nucleic Acids Research. 40: D815-20. PMID 22064855 DOI: 10.1093/Nar/Gkr916  0.392
2011 Psychogios N, Hau DD, Peng J, Guo AC, Mandal R, Bouatra S, Sinelnikov I, Krishnamurthy R, Eisner R, Gautam B, Young N, Xia J, Knox C, Dong E, Huang P, et al. The human serum metabolome. Plos One. 6: e16957. PMID 21359215 DOI: 10.1371/Journal.Pone.0016957  0.316
2011 Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Nucleic Acids Research. 39: D1035-41. PMID 21059682 DOI: 10.1093/Nar/Gkq1126  0.334
2010 Knox CK, Voth GA. Probing selected morphological models of hydrated Nafion using large-scale molecular dynamics simulations. The Journal of Physical Chemistry. B. 114: 3205-18. PMID 20158234 DOI: 10.1021/Jp9112409  0.45
2010 Frolkis A, Knox C, Lim E, Jewison T, Law V, Hau DD, Liu P, Gautam B, Ly S, Guo AC, Xia J, Liang Y, Shrivastava S, Wishart DS. SMPDB: The Small Molecule Pathway Database. Nucleic Acids Research. 38: D480-7. PMID 19948758 DOI: 10.1093/Nar/Gkp1002  0.357
2010 Lim E, Pon A, Djoumbou Y, Knox C, Shrivastava S, Guo AC, Neveu V, Wishart DS. T3DB: a comprehensively annotated database of common toxins and their targets. Nucleic Acids Research. 38: D781-6. PMID 19897546 DOI: 10.1093/Nar/Gkp934  0.333
2009 Wishart DS, Knox C, Guo AC, Eisner R, Young N, Gautam B, Hau DD, Psychogios N, Dong E, Bouatra S, Mandal R, Sinelnikov I, Xia J, Jia L, Cruz JA, et al. HMDB: a knowledgebase for the human metabolome. Nucleic Acids Research. 37: D603-10. PMID 18953024 DOI: 10.1093/Nar/Gkn810  0.351
2008 Cheng D, Knox C, Young N, Stothard P, Damaraju S, Wishart DS. PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites. Nucleic Acids Research. 36: W399-405. PMID 18487273 DOI: 10.1093/Nar/Gkn296  0.324
2008 Wishart DS, Knox C, Guo AC, Cheng D, Shrivastava S, Tzur D, Gautam B, Hassanali M. DrugBank: a knowledgebase for drugs, drug actions and drug targets Nucleic Acids Research. 36: 901-906. PMID 18048412 DOI: 10.1093/Nar/Gkm958  0.325
2008 Knox CK, Petersen MK, Voth GA. Molecular dynamics simulations of nanoscale hydrophilic domain structure in hydrated nafion Aiche Annual Meeting, Conference Proceedings.  0.549
2007 Wishart DS, Tzur D, Knox C, Eisner R, Guo AC, Young N, Cheng D, Jewell K, Arndt D, Sawhney S, Fung C, Nikolai L, Lewis M, Coutouly MA, Forsythe I, et al. HMDB: the Human Metabolome Database. Nucleic Acids Research. 35: D521-6. PMID 17202168 DOI: 10.1093/Nar/Gkl923  0.374
2007 Knox CK, Petersen MK, Voth GA. Molecular dynamics simulations of nanoscale hydrophilic/hydrophobic domain structure in hydrated Nafion 2007 Aiche Annual Meeting.  0.526
2006 Wishart DS, Knox C, Guo AC, Shrivastava S, Hassanali M, Stothard P, Chang Z, Woolsey J. DrugBank: a comprehensive resource for in silico drug discovery and exploration. Nucleic Acids Research. 34: D668-72. PMID 16381955 DOI: 10.1093/Nar/Gkj067  0.325
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