Ruiyu Xie, Ph.D. - Publications

Affiliations: 
2009 Pharmacology & Toxicology University of Arizona, Tucson, AZ 
Area:
Toxicology, Pharmacology

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Li J, Wu X, Ke J, Lee M, Lan Q, Li J, Yu J, Huang Y, Sun DQ, Xie R. TET1 dioxygenase is required for FOXA2-associated chromatin remodeling in pancreatic beta-cell differentiation. Nature Communications. 13: 3907. PMID 35798741 DOI: 10.1038/s41467-022-31611-x  0.326
2020 Ye J, Huang A, Wang H, Zhang AMY, Huang X, Lan Q, Sato T, Goyama S, Kurokawa M, Deng C, Sander M, Schaeffer DF, Li W, Kopp JL, Xie R. PRDM3 attenuates pancreatitis and pancreatic tumorigenesis by regulating inflammatory response. Cell Death & Disease. 11: 187. PMID 32179733 DOI: 10.1038/S41419-020-2371-X  0.375
2018 Wu X, Li G, Xie R. Decoding the role of TET family dioxygenases in lineage specification. Epigenetics & Chromatin. 11: 58. PMID 30290828 DOI: 10.1186/S13072-018-0228-7  0.355
2018 Li J, Wu X, Zhou Y, Lee M, Guo L, Han W, Mo W, Cao WM, Sun D, Xie R, Huang Y. Decoding the dynamic DNA methylation and hydroxymethylation landscapes in endodermal lineage intermediates during pancreatic differentiation of hESC. Nucleic Acids Research. PMID 29394393 DOI: 10.1093/Nar/Gky063  0.34
2015 Shih HP, Seymour PA, Patel NA, Xie R, Wang A, Liu PP, Yeo GW, Magnuson MA, Sander M. A Gene Regulatory Network Cooperatively Controlled by Pdx1 and Sox9 Governs Lineage Allocation of Foregut Progenitor Cells. Cell Reports. PMID 26440894 DOI: 10.1016/J.Celrep.2015.08.082  0.315
2015 Wang A, Yue F, Li Y, Xie R, Harper T, Patel NA, Muth K, Palmer J, Qiu Y, Wang J, Lam DK, Raum JC, Stoffers DA, Ren B, Sander M. Epigenetic priming of enhancers predicts developmental competence of hESC-derived endodermal lineage intermediates. Cell Stem Cell. 16: 386-99. PMID 25842977 DOI: 10.1016/J.Stem.2015.02.013  0.375
2015 Xie R, Carrano AC, Sander M. A systems view of epigenetic networks regulating pancreas development and β-cell function. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 7: 1-11. PMID 25644779 DOI: 10.1002/Wsbm.1287  0.364
2014 Zhang F, Xie R, Munoz FM, Lau SS, Monks TJ. PARP-1 hyperactivation and reciprocal elevations in intracellular Ca2+ during ROS-induced nonapoptotic cell death. Toxicological Sciences : An Official Journal of the Society of Toxicology. 140: 118-34. PMID 24752504 DOI: 10.1093/Toxsci/Kfu073  0.513
2013 Xie R, Everett LJ, Lim HW, Patel NA, Schug J, Kroon E, Kelly OG, Wang A, D'Amour KA, Robins AJ, Won KJ, Kaestner KH, Sander M. Dynamic chromatin remodeling mediated by polycomb proteins orchestrates pancreatic differentiation of human embryonic stem cells. Cell Stem Cell. 12: 224-37. PMID 23318056 DOI: 10.1016/J.Stem.2012.11.023  0.404
2012 van der Meulen T, Xie R, Kelly OG, Vale WW, Sander M, Huising MO. Urocortin 3 marks mature human primary and embryonic stem cell-derived pancreatic alpha and beta cells. Plos One. 7: e52181. PMID 23251699 DOI: 10.1371/Journal.Pone.0052181  0.315
2012 Morán I, Akerman I, van de Bunt M, Xie R, Benazra M, Nammo T, Arnes L, Nakić N, García-Hurtado J, Rodríguez-Seguí S, Pasquali L, Sauty-Colace C, Beucher A, Scharfmann R, van Arensbergen J, et al. Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes. Cell Metabolism. 16: 435-48. PMID 23040067 DOI: 10.1016/J.Cmet.2012.08.010  0.333
2012 Seymour PA, Shih HP, Patel NA, Freude KK, Xie R, Lim CJ, Sander M. A Sox9/Fgf feed-forward loop maintains pancreatic organ identity. Development (Cambridge, England). 139: 3363-72. PMID 22874919 DOI: 10.1242/Dev.078733  0.345
2006 Monks TJ, Xie R, Tikoo K, Lau SS. Ros-induced histone modifications and their role in cell survival and cell death. Drug Metabolism Reviews. 38: 755-67. PMID 17145700 DOI: 10.1080/03602530600959649  0.517
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