| Year |
Citation |
Score |
| 2014 |
Horn H, Haslam N, Jensen LJ. DoReMi: context-based prioritization of linear motif matches. Peerj. 2: e315. PMID 24711967 DOI: 10.7717/Peerj.315 |
0.48 |
|
| 2013 |
O'Brien KT, Haslam NJ, Shields DC. SLiMScape: A protein short linear motif analysis plugin for Cytoscape Bmc Bioinformatics. 14. PMID 23855714 DOI: 10.1186/1471-2105-14-224 |
0.621 |
|
| 2013 |
Mooney C, Haslam NJ, Holton TA, Pollastri G, Shields DC. PeptideLocator: prediction of bioactive peptides in protein sequences. Bioinformatics (Oxford, England). 29: 1120-6. PMID 23505299 DOI: 10.1093/Bioinformatics/Btt103 |
0.72 |
|
| 2012 |
Mooney C, Haslam NJ, Pollastri G, Shields DC. Towards the improved discovery and design of functional peptides: common features of diverse classes permit generalized prediction of bioactivity. Plos One. 7: e45012. PMID 23056189 DOI: 10.1371/Journal.Pone.0045012 |
0.52 |
|
| 2012 |
Haslam NJ, Shields DC. Peptide-binding domains: Are limp handshakes safest? Science Signaling. 5. PMID 23012652 DOI: 10.1126/Scisignal.2003372 |
0.551 |
|
| 2012 |
Haslam NJ, Shields DC. Profile-based short linear protein motif discovery Bmc Bioinformatics. 13. PMID 22607209 DOI: 10.1186/1471-2105-13-104 |
0.606 |
|
| 2012 |
Dinkel H, Michael S, Weatheritt RJ, Davey NE, Van Roey K, Altenberg B, Toedt G, Uyar B, Seiler M, Budd A, Jödicke L, Dammert MA, Schroeter C, Hammer M, Schmidt T, ... ... Haslam N, et al. ELM--the database of eukaryotic linear motifs. Nucleic Acids Research. 40: D242-51. PMID 22110040 DOI: 10.1093/Nar/Gkr1064 |
0.769 |
|
| 2012 |
Mooney C, Pollastri G, Shields DC, Haslam NJ. Prediction of short linear protein binding regions. Journal of Molecular Biology. 415: 193-204. PMID 22079048 DOI: 10.1016/J.Jmb.2011.10.025 |
0.672 |
|
| 2011 |
Davey NE, Haslam NJ, Shields DC, Edwards RJ. SLiMSearch 2.0: biological context for short linear motifs in proteins. Nucleic Acids Research. 39: W56-60. PMID 21622654 DOI: 10.1093/Nar/Gkr402 |
0.751 |
|
| 2010 |
Bourbeillon J, Orchard S, Benhar I, Borrebaeck C, de Daruvar A, Dübel S, Frank R, Gibson F, Gloriam D, Haslam N, Hiltker T, Humphrey-Smith I, Hust M, Juncker D, Koegl M, et al. Minimum information about a protein affinity reagent (MIAPAR). Nature Biotechnology. 28: 650-3. PMID 20622827 DOI: 10.1038/Nbt0710-650 |
0.384 |
|
| 2010 |
Davey NE, Haslam NJ, Shields DC, Edwards RJ. SLiMFinder: a web server to find novel, significantly over-represented, short protein motifs. Nucleic Acids Research. 38: W534-9. PMID 20497999 DOI: 10.1093/Nar/Gkq440 |
0.745 |
|
| 2010 |
Haslam NJ, Gibson TJ. EpiC: an open resource for exploring epitopes to aid antibody-based experiments. Journal of Proteome Research. 9: 3759-63. PMID 20496950 DOI: 10.1021/Pr100029F |
0.581 |
|
| 2010 |
Gould CM, Diella F, Via A, Puntervoll P, Gemünd C, Chabanis-Davidson S, Michael S, Sayadi A, Bryne JC, Chica C, Seiler M, Davey NE, Haslam N, Weatheritt RJ, Budd A, et al. ELM: the status of the 2010 eukaryotic linear motif resource. Nucleic Acids Research. 38: D167-80. PMID 19920119 DOI: 10.1093/Nar/Gkp1016 |
0.756 |
|
| 2010 |
Gloriam DE, Orchard S, Bertinetti D, Björling E, Bongcam-Rudloff E, Borrebaeck CA, Bourbeillon J, Bradbury AR, de Daruvar A, Dübel S, Frank R, Gibson TJ, Gold L, Haslam N, Herberg FW, et al. A community standard format for the representation of protein affinity reagents. Molecular & Cellular Proteomics : McP. 9: 1-10. PMID 19674966 DOI: 10.1074/Mcp.M900185-Mcp200 |
0.585 |
|
| 2010 |
Davey NE, Haslam NJ, Shields DC, Edwards RJ. SLiMSearch: A webserver for finding novel occurrences of short linear motifs in proteins, incorporating sequence context Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6282: 50-61. DOI: 10.1007/978-3-642-16001-1_5 |
0.759 |
|
| 2009 |
Weber G, Haslam N, Essex JW, Neylon C. Thermal equivalence of DNA duplexes for probe design. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 21: 034106. PMID 21817251 DOI: 10.1088/0953-8984/21/3/034106 |
0.566 |
|
| 2009 |
Weber G, Haslam N, Essex JW, Neylon C. Thermal equivalence of DNA duplexes for probe design Journal of Physics Condensed Matter. 21. DOI: 10.1088/0953-8984/21/3/034106 |
0.469 |
|
| 2009 |
Haslam N, Gibson T. EpiC: A resource for integrating information and analyses to enable selection of epitopes for antibody based experiments Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5647: 173-181. DOI: 10.1007/978-3-642-02879-3_14 |
0.463 |
|
| 2008 |
Haslam NJ, Whiteford NE, Weber G, Prügel-Bennett A, Essex JW, Neylon C. Optimal probe length varies for targets with high sequence variation: Implications for probe library design for resequencing highly variable genes Plos One. 3. PMID 18563203 DOI: 10.1371/Journal.Pone.0002500 |
0.728 |
|
| 2008 |
Diella F, Haslam N, Chica C, Budd A, Michael S, Brown NP, Trave G, Gibson TJ. Understanding eukaryotic linear motifs and their role in cell signaling and regulation. Frontiers in Bioscience : a Journal and Virtual Library. 13: 6580-603. PMID 18508681 DOI: 10.2741/3175 |
0.699 |
|
| 2006 |
Weber G, Haslam N, Whiteford N, Prügel-Bennett A, Essex JW, Neylon C. Thermal equivalence of DNA duplexes without calculation of melting temperature Nature Physics. 2: 55-59. DOI: 10.1038/Nphys189 |
0.552 |
|
| 2005 |
Whiteford N, Haslam N, Weber G, Prügel-Bennett A, Essex JW, Roach PL, Bradley M, Neylon C. An analysis of the feasibility of short read sequencing. Nucleic Acids Research. 33: e171. PMID 16275781 DOI: 10.1093/Nar/Gni170 |
0.728 |
|
| 2005 |
Whiteford N, Haslam N, Weber G, Prügel-Bennett A, Essex JW, Roach PL, Bradley M, Neylon C. An analysis of the feasibility of short read sequencing Nucleic Acids Research. 33: 1-6. DOI: 10.1093/nar/gni170 |
0.606 |
|
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