| Year |
Citation |
Score |
| 2024 |
Zhu G, Li R, Zhang L, Ma L, Li J, Chen J, Deng Z, Yan S, Li T, Ren H, Cui K, Qu G, Zhu B, Fu D, Luo Y, et al. RNA-protein interactions reveals the pivotal role of lncRNA1840 in tomato fruit maturation. The Plant Journal : For Cell and Molecular Biology. PMID 39226395 DOI: 10.1111/tpj.16998 |
0.35 |
|
| 2024 |
Bian H, Song P, Gao Y, Deng Z, Huang C, Yu L, Wang H, Ye B, Cai Z, Pan Y, Wang F, Liu J, Gao X, Chen K, Jia G, et al. The mA reader SlYTH2 negatively regulates tomato fruit aroma by impeding the translation process. Proceedings of the National Academy of Sciences of the United States of America. 121: e2405100121. PMID 38950372 DOI: 10.1073/pnas.2405100121 |
0.31 |
|
| 2024 |
Zhang N, Wei CQ, Xu DJ, Deng ZP, Zhao YC, Ai LF, Sun Y, Wang ZY, Zhang SW. Photoregulatory protein kinases fine-tune plant photomorphogenesis by directing a bifunctional phospho-code on HY5 in Arabidopsis. Developmental Cell. PMID 38677285 DOI: 10.1016/j.devcel.2024.04.007 |
0.662 |
|
| 2024 |
Ma L, Zheng Y, Zhou Z, Deng Z, Tan J, Bai C, Fu A, Wang Q, Zuo J. Dissection of mRNA acC acetylation modifications in AC and Nr fruits: insights into the regulation of fruit ripening by ethylene. Molecular Horticulture. 4: 5. PMID 38369544 DOI: 10.1186/s43897-024-00082-7 |
0.319 |
|
| 2024 |
Zheng X, Chen H, Deng Z, Wu Y, Zhong L, Wu C, Yu X, Chen Q, Yan S. The tRNA thiolation-mediated translational control is essential for plant immunity. Elife. 13. PMID 38284752 DOI: 10.7554/eLife.93517 |
0.304 |
|
| 2023 |
Li A, Lin J, Zeng Z, Deng Z, Tan J, Chen X, Ding G, Zhu M, Xu B, Atkinson RG, Nieuwenhuizen NJ, Ampomah-Dwamena C, Cheng Y, Deng X, Zeng Y. The kiwifruit amyloplast proteome (kfALP): a resource to better understand the mechanisms underlying amyloplast biogenesis and differentiation. The Plant Journal : For Cell and Molecular Biology. PMID 38159243 DOI: 10.1111/tpj.16611 |
0.319 |
|
| 2023 |
Li C, Li X, Deng Z, Song Y, Liu X, Tang XA, Li Z, Zhang Y, Zhang B, Tang W, Shang JX, Sun Y. EGR1 and EGR2 positively regulate plant ABA signaling by modulating the phosphorylation of SnRK2.2. The New Phytologist. PMID 38095247 DOI: 10.1111/nph.19458 |
0.795 |
|
| 2023 |
Feng H, Tan J, Deng Z. Decoding Plant Adaptation: UBP12 and UBP13 in Hormone Signaling, Light Response, and Developmental Processes. Journal of Experimental Botany. PMID 37904584 DOI: 10.1093/jxb/erad429 |
0.434 |
|
| 2023 |
Zhang J, Li Y, Du S, Deng Z, Liang Q, Song G, Wang H, Yan M, Wang X. Transcriptomic and proteomic analysis reveals (E)-2-hexenal modulates tomato resistance against Botrytis cinerea by regulating plant defense mechanism. Plant Molecular Biology. 111: 505-522. PMID 37027117 DOI: 10.1007/s11103-023-01339-3 |
0.395 |
|
| 2023 |
Zhang J, Liang Q, Li Y, Deng Z, Song G, Wang H, Yan M, Wang X. Integrated transcriptome and metabolome analyses shed light on the defense mechanisms in tomato plants after (E)-2-hexenal fumigation. Genomics. 115: 110592. PMID 36854356 DOI: 10.1016/j.ygeno.2023.110592 |
0.384 |
|
| 2022 |
Miao R, Ye Z, MacFarlane S, Li Y, Mao Q, Tian Y, Deng Z, Sun Z, Yang J, Li J, Yan F, Chen J, Yu C. The P3N-PIPO Protein Encoded by Wheat Yellow Mosaic Virus Is a Pathogenicity Determinant and Promotes Its Pathogenicity through Interaction with NbRLK6 in . Viruses. 14. PMID 36298727 DOI: 10.3390/v14102171 |
0.304 |
|
| 2022 |
Wang H, Han C, Wang JG, Chu X, Shi W, Yao L, Chen J, Hao W, Deng Z, Fan M, Bai MY. Regulatory functions of cellular energy sensor SnRK1 for nitrate signalling through NLP7 repression. Nature Plants. PMID 36050463 DOI: 10.1038/s41477-022-01236-5 |
0.73 |
|
| 2022 |
Guo S, Zheng Y, Meng D, Zhao X, Sang Z, Tan J, Deng Z, Lang Z, Zhang B, Wang Q, Mondher B, Zuo J. DNA and coding/noncoding RNA methylation analysis provide insights into tomato fruit ripening. The Plant Journal : For Cell and Molecular Biology. PMID 36004545 DOI: 10.1111/tpj.15951 |
0.3 |
|
| 2022 |
Xing J, Tan J, Feng H, Zhou Z, Deng M, Luo H, Deng Z. Integrative Proteome and Phosphoproteome Profiling of Early Cold Response in Maize Seedlings. International Journal of Molecular Sciences. 23. PMID 35742945 DOI: 10.3390/ijms23126493 |
0.411 |
|
| 2022 |
Yue ZL, Liu N, Deng ZP, Zhang Y, Wu ZM, Zhao JL, Sun Y, Wang ZY, Zhang SW. The receptor kinase OsWAK11 monitors cell wall pectin changes to fine-tune brassinosteroid signaling and regulate cell elongation in rice. Current Biology : Cb. PMID 35512695 DOI: 10.1016/j.cub.2022.04.028 |
0.581 |
|
| 2021 |
Tan J, Zhou Z, Feng H, Xing J, Niu Y, Deng Z. Data-Independent Acquisition-Based Proteome and Phosphoproteome Profiling Reveals Early Protein Phosphorylation and Dephosphorylation Events in Seedlings upon Cold Exposure. International Journal of Molecular Sciences. 22. PMID 34884660 DOI: 10.3390/ijms222312856 |
0.522 |
|
| 2021 |
Bi Y, Deng Z, Ni W, Shrestha R, Savage D, Hartwig T, Patil S, Hong SH, Zhang Z, Oses-Prieto JA, Li KH, Quail PH, Burlingame AL, Xu SL, Wang ZY. Arabidopsis ACINUS is O-glycosylated and regulates transcription and alternative splicing of regulators of reproductive transitions. Nature Communications. 12: 945. PMID 33574257 DOI: 10.1038/s41467-021-20929-7 |
0.748 |
|
| 2021 |
Wang L, Zhan L, Zhao Y, Huang Y, Wu C, Pan T, Qin Q, Xu Y, Deng Z, Li J, Hu H, Xue S, Yan S. The ATR-WEE1 kinase module inhibits the MAC complex to regulate replication stress response. Nucleic Acids Research. PMID 33450002 DOI: 10.1093/nar/gkaa1082 |
0.356 |
|
| 2020 |
Han C, Liu Y, Shi W, Qiao Y, Wang L, Tian Y, Fan M, Deng Z, Lau OS, De Jaeger G, Bai MY. KIN10 promotes stomatal development through stabilization of the SPEECHLESS transcription factor. Nature Communications. 11: 4214. PMID 32843632 DOI: 10.1038/S41467-020-18048-W |
0.748 |
|
| 2020 |
Wang Z, Ren Z, Cheng C, Wang T, Ji H, Zhao Y, Deng Z, Zhi L, Lu J, Wu X, Xu S, Cao M, Zhao H, Liu L, Zhu J, et al. Counteraction of ABA-Mediated Inhibition of Seed Germination and Seedling Establishment by ABA Signaling Terminator in Arabidopsis. Molecular Plant. PMID 32619606 DOI: 10.1016/J.Molp.2020.06.011 |
0.496 |
|
| 2019 |
Zhao JL, Zhang LQ, Liu N, Xu S, Yue ZL, Zhang LL, Deng Z, Burlingame AL, Sun DY, Wang ZY, Sun Y, Zhang SW. Mutual regulation of receptor-like kinase SIT1 and B'κ-PP2A shapes the early response of rice to salt stress. The Plant Cell. PMID 31221736 DOI: 10.1105/Tpc.18.00706 |
0.77 |
|
| 2019 |
Zhan Y, Deng Z, Yan Y, Zhang H, Lu C, Yang Z, Shang L, Huang Y, Lv F, Liu Y, Liu Y, Wang S, Chen S, Zhang XX, Cheng Q, et al. NfiR, a new regulatory ncRNA, is required in concert with the NfiS ncRNA for optimal expression of nitrogenase genes in A1501. Applied and Environmental Microbiology. PMID 31076427 DOI: 10.1128/AEM.00762-19 |
0.347 |
|
| 2019 |
Zhao J, Xu J, Chen B, Cui W, Zhou Z, Song X, Chen Z, Zheng H, Lin L, Peng J, Lu Y, Deng Z, Chen J, Yan F. Characterization of Proteins Involved in Chloroplast Targeting Disturbed by Rice Stripe Virus by Novel Protoplast⁻Chloroplast Proteomics. International Journal of Molecular Sciences. 20. PMID 30634635 DOI: 10.3390/ijms20020253 |
0.316 |
|
| 2017 |
Tan J, Zhou Z, Niu Y, Sun X, Deng Z. Identification and Functional Characterization of Tomato CircRNAs Derived from Genes Involved in Fruit Pigment Accumulation. Scientific Reports. 7: 8594. PMID 28819222 DOI: 10.1038/S41598-017-08806-0 |
0.381 |
|
| 2016 |
Deng Z, Wang ZY, Kutschera U. Seedling development in maize cv. B73 and blue light-mediated proteomic changes in the tip vs. stem of the coleoptile. Protoplasma. PMID 27631339 DOI: 10.1007/S00709-016-1023-6 |
0.467 |
|
| 2016 |
Chen X, Dong Y, Yu C, Fang X, Deng Z, Yan C, Chen J. Analysis of the Proteins Secreted from the Oryza meyeriana Suspension-Cultured Cells Induced by Xanthomonas oryzae pv. oryzae. Plos One. 11: e0154793. PMID 27196123 DOI: 10.1371/Journal.Pone.0154793 |
0.506 |
|
| 2016 |
Chen X, Deng Z, Yu C, Yan C, Chen J. Secretome analysis of rice suspension-cultured cells infected by Xanthomonas oryzae pv.oryza (Xoo). Proteome Science. 14: 2. PMID 26839515 DOI: 10.1186/S12953-016-0091-Z |
0.388 |
|
| 2016 |
Huo C, Zhang B, Wang H, Wang F, Liu M, Gao Y, Zhang W, Deng Z, Sun D, Tang W. Comparative study of early cold-regulated proteins by two dimensional difference gel electrophoresis reveals a key role for phospholipase Dα1 in mediating cold acclimation signaling pathway in rice. Molecular & Cellular Proteomics : McP. PMID 26747563 DOI: 10.1074/Mcp.M115.049759 |
0.774 |
|
| 2014 |
Sun X, Yang Q, Deng Z, Ye X. Digital inventory of Arabidopsis transcripts revealed by 61 RNA sequencing samples. Plant Physiology. 166: 869-78. PMID 25118256 DOI: 10.1104/Pp.114.241604 |
0.373 |
|
| 2014 |
Deng Z, Oses-Prieto JA, Kutschera U, Tseng TS, Hao L, Burlingame AL, Wang ZY, Briggs WR. Blue light-induced proteomic changes in etiolated Arabidopsis seedlings. Journal of Proteome Research. 13: 2524-33. PMID 24712693 DOI: 10.1021/Pr500010Z |
0.5 |
|
| 2013 |
Wang C, Shang JX, Chen QX, Oses-Prieto JA, Bai MY, Yang Y, Yuan M, Zhang YL, Mu CC, Deng Z, Wei CQ, Burlingame AL, Wang ZY, Sun Y. Identification of BZR1-interacting proteins as potential components of the brassinosteroid signaling pathway in Arabidopsis through tandem affinity purification. Molecular & Cellular Proteomics : McP. 12: 3653-65. PMID 24019147 DOI: 10.1074/Mcp.M113.029256 |
0.825 |
|
| 2012 |
Deng Z, Bu S, Wang ZY. Quantitative analysis of protein phosphorylation using two-dimensional difference gel electrophoresis. Methods in Molecular Biology (Clifton, N.J.). 876: 47-66. PMID 22576085 DOI: 10.1007/978-1-61779-809-2_4 |
0.601 |
|
| 2011 |
Deng Z, Xu S, Chalkley RJ, Oses-Prieto JA, Burlingame AL, Wang ZY, Kutschera U. Rapid auxin-mediated changes in the proteome of the epidermal cells in rye coleoptiles: implications for the initiation of growth. Plant Biology (Stuttgart, Germany). 14: 420-7. PMID 22117532 DOI: 10.1111/J.1438-8677.2011.00513.X |
0.749 |
|
| 2011 |
Tang W, Yuan M, Wang R, Yang Y, Wang C, Oses-Prieto JA, Kim TW, Zhou HW, Deng Z, Gampala SS, Gendron JM, Jonassen EM, Lillo C, DeLong A, Burlingame AL, et al. PP2A activates brassinosteroid-responsive gene expression and plant growth by dephosphorylating BZR1. Nature Cell Biology. 13: 124-31. PMID 21258370 DOI: 10.1038/Ncb2151 |
0.755 |
|
| 2011 |
Li T, Xu SL, Oses-Prieto JA, Putil S, Xu P, Wang RJ, Li KH, Maltby DA, An LH, Burlingame AL, Deng ZP, Wang ZY. Proteomics analysis reveals post-translational mechanisms for cold-induced metabolic changes in Arabidopsis. Molecular Plant. 4: 361-74. PMID 21242321 DOI: 10.1093/Mp/Ssq078 |
0.741 |
|
| 2010 |
Wang F, Bai MY, Deng Z, Oses-Prieto JA, Burlingame AL, Lu T, Chong K, Wang ZY. Proteomic study identifies proteins involved in brassinosteroid regulation of rice growth. Journal of Integrative Plant Biology. 52: 1075-85. PMID 21106006 DOI: 10.1111/J.1744-7909.2010.00992.X |
0.791 |
|
| 2010 |
Kutschera U, Deng Z, Oses-Prieto JA, Burlingame AL, Wang ZY. Cessation of coleoptile elongation and loss of auxin sensitivity in developing rye seedlings: a quantitative proteomic analysis. Plant Signaling & Behavior. 5: 509-17. PMID 20234181 DOI: 10.4161/Psb.11210 |
0.458 |
|
| 2010 |
Tang W, Deng Z, Wang ZY. Proteomics shed light on the brassinosteroid signaling mechanisms. Current Opinion in Plant Biology. 13: 27-33. PMID 20004136 DOI: 10.1016/J.Pbi.2009.10.007 |
0.784 |
|
| 2009 |
Kim TW, Guan S, Sun Y, Deng Z, Tang W, Shang JX, Sun Y, Burlingame AL, Wang ZY. Brassinosteroid signal transduction from cell-surface receptor kinases to nuclear transcription factors. Nature Cell Biology. 11: 1254-60. PMID 19734888 DOI: 10.1038/Ncb1970 |
0.837 |
|
| 2008 |
Gu Y, Deng Z, Paredez AR, DeBolt S, Wang ZY, Somerville C. Prefoldin 6 is required for normal microtubule dynamics and organization in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. 105: 18064-18069. PMID 19004800 DOI: 10.1073/Pnas.0808652105 |
0.457 |
|
| 2008 |
Tang W, Kim TW, Oses-Prieto JA, Sun Y, Deng Z, Zhu S, Wang R, Burlingame AL, Wang ZY. BSKs mediate signal transduction from the receptor kinase BRI1 in Arabidopsis. Science (New York, N.Y.). 321: 557-60. PMID 18653891 DOI: 10.1126/Science.1156973 |
0.802 |
|
| 2008 |
Tang W, Deng Z, Oses-Prieto JA, Suzuki N, Zhu S, Zhang X, Burlingame AL, Wang ZY. Proteomics studies of brassinosteroid signal transduction using prefractionation and two-dimensional DIGE. Molecular & Cellular Proteomics : McP. 7: 728-38. PMID 18182375 DOI: 10.1074/Mcp.M700358-Mcp200 |
0.842 |
|
| 2007 |
Deng Z, Zhang X, Tang W, Oses-Prieto JA, Suzuki N, Gendron JM, Chen H, Guan S, Chalkley RJ, Peterman TK, Burlingame AL, Wang ZY. A proteomics study of brassinosteroid response in Arabidopsis. Molecular & Cellular Proteomics : McP. 6: 2058-71. PMID 17848588 DOI: 10.1074/Mcp.M700123-Mcp200 |
0.818 |
|
| 2007 |
Gampala SS, Kim TW, He JX, Tang W, Deng Z, Bai MY, Guan S, Lalonde S, Sun Y, Gendron JM, Chen H, Shibagaki N, Ferl RJ, Ehrhardt D, Chong K, et al. An essential role for 14-3-3 proteins in brassinosteroid signal transduction in Arabidopsis. Developmental Cell. 13: 177-89. PMID 17681130 DOI: 10.1016/J.Devcel.2007.06.009 |
0.744 |
|
| 2003 |
Ramakrishna W, Deng Z, Ding CK, Handa AK, Ozminkowski RH. A novel small heat shock protein gene, vis1, contributes to pectin depolymerization and juice viscosity in tomato fruit. Plant Physiology. 131: 725-35. PMID 12586896 DOI: 10.1104/Pp.012401 |
0.623 |
|
| Show low-probability matches. |