| Year |
Citation |
Score |
| 2015 |
Quan S, Skovgaard O, McLaughlin RE, Buurman ET, Squires CL. Markerless Escherichia coli rrn Deletion Strains for Genetic Determination of Ribosomal Binding Sites. G3 (Bethesda, Md.). PMID 26438293 DOI: 10.1534/G3.115.022301 |
0.414 |
|
| 2013 |
Orelle C, Carlson S, Kaushal B, Almutairi MM, Liu H, Ochabowicz A, Quan S, Pham VC, Squires CL, Murphy BT, Mankin AS. Tools for characterizing bacterial protein synthesis inhibitors. Antimicrobial Agents and Chemotherapy. 57: 5994-6004. PMID 24041905 DOI: 10.1128/Aac.01673-13 |
0.358 |
|
| 2011 |
Cruz-Vera LR, Sachs MS, Squires CL, Yanofsky C. Nascent polypeptide sequences that influence ribosome function. Current Opinion in Microbiology. 14: 160-6. PMID 21342782 DOI: 10.1016/J.Mib.2011.01.011 |
0.617 |
|
| 2009 |
Cabrera JE, Cagliero C, Quan S, Squires CL, Jin DJ. Active transcription of rRNA operons condenses the nucleoid in Escherichia coli: examining the effect of transcription on nucleoid structure in the absence of transertion. Journal of Bacteriology. 191: 4180-5. PMID 19395497 DOI: 10.1128/Jb.01707-08 |
0.498 |
|
| 2008 |
Arnvig KB, Zeng S, Quan S, Papageorge A, Zhang N, Villapakkam AC, Squires CL. Evolutionary comparison of ribosomal operon antitermination function. Journal of Bacteriology. 190: 7251-7. PMID 18757535 DOI: 10.1128/Jb.00760-08 |
0.576 |
|
| 2007 |
Cruz-Vera LR, New A, Squires C, Yanofsky C. Ribosomal features essential for tna operon induction: tryptophan binding at the peptidyl transferase center. Journal of Bacteriology. 189: 3140-6. PMID 17293420 DOI: 10.1128/Jb.01869-06 |
0.614 |
|
| 2005 |
Cruz-Vera LR, Rajagopal S, Squires C, Yanofsky C. Features of ribosome-peptidyl-tRNA interactions essential for tryptophan induction of tna operon expression. Molecular Cell. 19: 333-43. PMID 16061180 DOI: 10.1016/J.Molcel.2005.06.013 |
0.604 |
|
| 2005 |
Quan S, Zhang N, French S, Squires CL. Transcriptional polarity in rRNA operons of Escherichia coli nusA and nusB mutant strains. Journal of Bacteriology. 187: 1632-8. PMID 15716433 DOI: 10.1128/Jb.187.5.1632-1638.2005 |
0.499 |
|
| 2004 |
Torres M, Balada JM, Zellars M, Squires C, Squires CL. In vivo effect of NusB and NusG on rRNA transcription antitermination. Journal of Bacteriology. 186: 1304-10. PMID 14973028 DOI: 10.1128/Jb.186.5.1304-1310.2004 |
0.56 |
|
| 2003 |
Squires CL, Condon C, Seoh HK. Assay of antitermination of ribosomal RNA transcription. Methods in Enzymology. 371: 472-87. PMID 14712722 DOI: 10.1016/S0076-6879(03)71035-0 |
0.532 |
|
| 2003 |
Zaporojets D, French S, Squires CL. Products transcribed from rearranged rrn genes of Escherichia coli can assemble to form functional ribosomes. Journal of Bacteriology. 185: 6921-7. PMID 14617656 DOI: 10.1128/Jb.185.23.6921-6927.2003 |
0.474 |
|
| 2003 |
Seoh HK, Weech M, Zhang N, Squires CL. rRNA antitermination functions with heat shock promoters. Journal of Bacteriology. 185: 6486-9. PMID 14563887 DOI: 10.1128/Jb.185.21.6486-6489.2003 |
0.567 |
|
| 2001 |
Torres M, Condon C, Balada JM, Squires C, Squires CL. Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination. The Embo Journal. 20: 3811-20. PMID 11447122 DOI: 10.1093/Emboj/20.14.3811 |
0.512 |
|
| 2001 |
O'Connor M, Lee WCM, Mankad A, Squires CL, Dahlberg AE. Mutagenesis of the peptidyltransferase center of 23S rRNA: The invariant U2449 is dispensable Nucleic Acids Research. 29: 710-715. PMID 11160893 DOI: 10.1093/Nar/29.3.710 |
0.408 |
|
| 2001 |
Squires CL, Zaporojets D. Proteins shared by the transcription and translation machines. Annual Review of Microbiology. 54: 775-98. PMID 11018144 DOI: 10.1146/Annurev.Micro.54.1.775 |
0.357 |
|
| 2000 |
Moine H, Squires CL, Ehresmann B, Ehresmann C. In vivo selection of functional ribosomes with variations in the rRNA-binding site of Escherichia coli ribosomal protein S8: evolutionary implications. Proceedings of the National Academy of Sciences of the United States of America. 97: 605-10. PMID 10639126 DOI: 10.1073/Pnas.97.2.605 |
0.412 |
|
| 2000 |
Voulgaris J, Pokholok D, Holmes WM, Squires C, Squires CL. The feedback response of Escherichia coli rRNA synthesis is not identical to the mechanism of growth rate-dependent control Journal of Bacteriology. 182: 536-539. PMID 10629207 DOI: 10.1128/Jb.182.2.536-539.2000 |
0.341 |
|
| 1999 |
Gabashvili IS, Agrawal RK, Grassucci R, Squires CL, Dahlberg AE, Frank J. Major rearrangements in the 70S ribosomal 3D structure caused by a conformational switch in 16S ribosomal RNA. The Embo Journal. 18: 6501-7. PMID 10562562 DOI: 10.1093/Emboj/18.22.6501 |
0.507 |
|
| 1999 |
Vila-Sanjurjo A, Squires CL, Dahlberg AE. Isolation of kasugamycin resistant mutants in the 16 S ribosomal RNA of Escherichia coli. Journal of Molecular Biology. 293: 1-8. PMID 10512710 DOI: 10.1006/Jmbi.1999.3160 |
0.408 |
|
| 1999 |
O'Connor M, Asai T, Squires CL, Dahlberg AE. Enhancement of translation by the downstream box does not involve base pairing of mRNA with the penultimate stem sequence of 16s rRNA Proceedings of the National Academy of Sciences of the United States of America. 96: 8973-8978. PMID 10430880 DOI: 10.1073/Pnas.96.16.8973 |
0.394 |
|
| 1999 |
Voulgaris J, French S, Gourse RL, Squires C, Squires CL. Increased rrn gene dosage causes intermittent transcription of rRNA in Escherichia coli Journal of Bacteriology. 181: 4170-4175. PMID 10400572 DOI: 10.1128/Jb.181.14.4170-4175.1999 |
0.512 |
|
| 1999 |
Zellars M, Squires CL. Antiterminator-dependent modulation of transcription elongation rates by NusB and NusG. Molecular Microbiology. 32: 1296-304. PMID 10383769 DOI: 10.1046/J.1365-2958.1999.01442.X |
0.543 |
|
| 1999 |
Asai T, Condon C, Voulgaris J, Zaporojets D, Shen B, Al-Omar M, Squires C, Squires CL. Construction and initial characterization of Escherichia coli strains with few or no intact chromosomal rRNA operons. Journal of Bacteriology. 181: 3803-9. PMID 10368156 DOI: 10.1128/Jb.181.12.3803-3809.1999 |
0.375 |
|
| 1999 |
Asai T, Zaporojets D, Squires C, Squires CL. An Escherichia coli strain with all chromosomal rRNA operons inactivated: complete exchange of rRNA genes between bacteria. Proceedings of the National Academy of Sciences of the United States of America. 96: 1971-6. PMID 10051579 DOI: 10.1073/Pnas.96.5.1971 |
0.423 |
|
| 1995 |
Condon C, Liveris D, Squires C, Schwartz I, Squires CL. rRNA operon multiplicity in Escherichia coli and the physiological implications of rrn inactivation. Journal of Bacteriology. 177: 4152-6. PMID 7608093 DOI: 10.1128/Jb.177.14.4152-4156.1995 |
0.35 |
|
| 1995 |
Condon C, Squires C, Squires CL. Control of rRNA transcription in Escherichia coli. Microbiological Reviews. 59: 623-645. DOI: 10.1128/Mmbr.59.4.623-645.1995 |
0.5 |
|
| 1993 |
Squires CL, Greenblatt J, Li J, Condon C, Squires CL. Ribosomal RNA antitermination in vitro: requirement for Nus factors and one or more unidentified cellular components. Proceedings of the National Academy of Sciences of the United States of America. 90: 970-4. PMID 8430111 DOI: 10.1073/Pnas.90.3.970 |
0.532 |
|
| 1993 |
Condon C, French S, Squires C, Squires C. Depletion of functional ribosomal RNA operons in Escherichia coli causes increased expression of the remaining intact copies. The Embo Journal. 12: 4305-4315. DOI: 10.1002/J.1460-2075.1993.Tb06115.X |
0.548 |
|
| 1992 |
Condon C, Philips J, Fu Z, Squires C, Squires C. Comparison of the expression of the seven ribosomal RNA operons in Escherichia coli. The Embo Journal. 11: 4175-4185. DOI: 10.1002/J.1460-2075.1992.Tb05511.X |
0.465 |
|
| 1991 |
Squires CL, Pedersen S, Ross BM, Squires C. ClpB is the Escherichia coli heat shock protein F84.1. Journal of Bacteriology. 173: 4254-62. PMID 2066329 DOI: 10.1128/Jb.173.14.4254-4262.1991 |
0.351 |
|
| 1991 |
Albrechtsen B, Ross BM, Squires C, Squires CL. Transcriptional termination sequence at the end of the Escherichia coli ribosomal RNA G operon: complex terminators and antitermination. Nucleic Acids Research. 19: 1845-52. PMID 1709493 DOI: 10.1093/Nar/19.8.1845 |
0.574 |
|
| 1990 |
Albrechtsen B, Squires CL, Li S, Squires C. Antitermination of characterized transcriptional terminators by the Escherichia coli rrnG leader region. Journal of Molecular Biology. 213: 123-34. PMID 2187097 DOI: 10.1016/S0022-2836(05)80125-1 |
0.574 |
|
| 1989 |
Berg KL, Squires C, Squires CL. Ribosomal RNA operon anti-termination. Function of leader and spacer region box B-box A sequences and their conservation in diverse micro-organisms Journal of Molecular Biology. 209: 345-358. PMID 2479752 DOI: 10.1016/0022-2836(89)90002-8 |
0.444 |
|
| 1987 |
Berg KL, Squires CL, Squires C. In vivo translation of a region within the rrnB 16S rRNA gene of Escherichia coli Journal of Bacteriology. 169: 1691-1701. PMID 2435709 DOI: 10.1128/Jb.169.4.1691-1701.1987 |
0.584 |
|
| 1984 |
Aksoy S, Squires CL, Squires C. Evidence for antitermination in Escherichia coli rRNA transcription Journal of Bacteriology. 159: 260-264. PMID 6330033 DOI: 10.1128/Jb.159.1.260-264.1984 |
0.497 |
|
| 1984 |
Li SC, Squires CL, Squires C. Antitermination of E. coli rRNA transcription is caused by a control region segment containing lambda nut-like sequences. Cell. 38: 851-60. PMID 6091902 DOI: 10.1016/0092-8674(84)90280-0 |
0.606 |
|
| 1983 |
Piette J, Cunin R, Boyen A, Charlier D, Crabeel M, Van Vliet F, Glansdorff N, Squires C, Squires CL. The regulatory region of the divergent argECBH operon in Escherichia coli K-12. Nucleic Acids Research. 10: 8031-48. PMID 6761650 DOI: 10.1093/Nar/10.24.8031 |
0.504 |
|
| 1982 |
Shen WF, Squires C, Squires CL. Nucleotide sequence of the rrnG ribosomal RNA promoter region of Escherichia coli. Nucleic Acids Research. 10: 3303-13. PMID 6285294 DOI: 10.1093/Nar/10.10.3303 |
0.608 |
|
| 1982 |
Squires C, Krainer A, Barry G, Shen WF, Squires CL. Nucleotide sequence at the end of the gene for the RNA polymerase beta' subunit (rpoC). Nucleic Acids Research. 9: 6827-40. PMID 6278450 DOI: 10.1093/Nar/9.24.6827 |
0.579 |
|
| 1980 |
Barry G, Squires C, Squires CL. Attenuation and processing of RNA from the rplJL--rpoBC transcription unit of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 77: 3331-5. PMID 6158044 DOI: 10.1073/Pnas.77.6.3331 |
0.573 |
|
| 1980 |
Barry G, Squires CL, Squires C. Control features within the rplJL-rpoBC transcription unit of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 76: 4922-6. PMID 116224 DOI: 10.1073/Pnas.76.10.4922 |
0.508 |
|
| 1979 |
Wollenzien PL, Hearst JE, Squires C. Determining the polarity of the map of crosslinked interactions in Escherichia coli 16 S ribosomal RNA Journal of Molecular Biology. 135: 285-291. PMID 93647 DOI: 10.1016/0022-2836(79)90353-X |
0.39 |
|
| 1978 |
Bennett GN, Schweingruber ME, Brown KD, Squires C, Yanofsky C. Nucleotide sequence of the promoter--operator region of the tryptophan operon of Escherichia coli. Journal of Molecular Biology. 121: 113-37. PMID 351191 DOI: 10.1016/S0022-2836(78)80001-1 |
0.662 |
|
| 1976 |
Bennett GN, Schweingruber ME, Brown KD, Squires C, Yanofsky C. Nucleotide sequence of region preceding trp mRNA initiation site and its role in promoter and operator function. Proceedings of the National Academy of Sciences of the United States of America. 73: 2351-5. PMID 1088825 DOI: 10.1073/Pnas.73.7.2351 |
0.657 |
|
| 1976 |
Platt T, Squires C, Yanofsky C. Ribosome-protected regions in the leader-trpE sequence of Escherichia coli tryptophan operon messenger RNA. Journal of Molecular Biology. 103: 411-20. PMID 781274 DOI: 10.1016/0022-2836(76)90320-X |
0.728 |
|
| 1976 |
Lee F, Squires CL, Squires C, Yanofsky C. Termination of transcription in vitro in the Escherichia coli tryptophan operon leader region. Journal of Molecular Biology. 103: 383-93. PMID 781272 DOI: 10.1016/0022-2836(76)90318-1 |
0.704 |
|
| 1976 |
Squires C, Lee F, Bertrand K, Squires CL, Bronson MJ, Yanofsky C. Nucleotide sequence of the 5' end of tryptophan messenger RNA of Escherichia coli. Journal of Molecular Biology. 103: 351-81. PMID 781271 DOI: 10.1016/0022-2836(76)90317-X |
0.626 |
|
| 1976 |
Bertrand K, Squires C, Yanofsky C. Transcription termination in vivo in the leader region of the tryptophan operon of Escherichia coli. Journal of Molecular Biology. 103: 319-37. PMID 781269 DOI: 10.1016/0022-2836(76)90315-6 |
0.747 |
|
| 1975 |
Squires CL, Lee FD, Yanofsky C. Interaction of the trp repressor and RNA polymerase with the trp operon. Journal of Molecular Biology. 92: 93-111. PMID 1097702 DOI: 10.1016/0022-2836(75)90093-5 |
0.669 |
|
| 1975 |
Bertrand K, Korn L, Lee F, Platt T, Squires CL, Squires C, Yanofsky C. New features of the regulation of the tryptophan operon. Science (New York, N.Y.). 189: 22-6. PMID 1094538 DOI: 10.1126/Science.1094538 |
0.544 |
|
| 1974 |
Bronson MJ, Squires C, Yanofsky C. Nucleotide sequences from tryptophan messenger RNA of Escherichia coli: the sequence corresponding to the amino-terminal region of the first polypeptide specified by the operon. Proceedings of the National Academy of Sciences of the United States of America. 70: 2335-9. PMID 4599621 DOI: 10.1073/Pnas.70.8.2335 |
0.619 |
|
| 1973 |
Rose JK, Squires CL, Yanofsky C, Yang HL, Zubay G. Regulation of in vitro transcription of the tryptophan operon by purified RNA polymerase in the presence of partially purified repressor and tryptophan. Nature: New Biology. 245: 133-7. PMID 4582892 DOI: 10.1038/Newbio245133A0 |
0.712 |
|
| 1973 |
Squires CL, Rose JK, Yanofsky C, Yang HL, Zubay G. Tryptophanyl-tRNA and tryptophanyl-tRNA synthetase are not required for in vitro repression of the tryptophan operon. Nature: New Biology. 245: 131-3. PMID 4582891 DOI: 10.1038/Newbio245131A0 |
0.689 |
|
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