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John Barry Egan, Ph.D - Publications

Affiliations: 
University of Adelaide, Adelaide, South Australia, Australia 
Area:
phage, bacterial genetics
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2011 Palmer AC, Egan JB, Shearwin KE. Transcriptional interference by RNA polymerase pausing and dislodgement of transcription factors. Transcription. 2: 9-14. PMID 21326903 DOI: 10.4161/trns.2.1.13511  0.638
2009 Palmer AC, Ahlgren-Berg A, Egan JB, Dodd IB, Shearwin KE. Potent transcriptional interference by pausing of RNA polymerases over a downstream promoter. Molecular Cell. 34: 545-55. PMID 19524535 DOI: 10.1016/J.Molcel.2009.04.018  0.689
2007 Schubert RA, Dodd IB, Egan JB, Shearwin KE. Cro's role in the CI Cro bistable switch is critical for {lambda}'s transition from lysogeny to lytic development. Genes & Development. 21: 2461-72. PMID 17908932 DOI: 10.1101/Gad.1584907  0.623
2006 Pinkett HW, Shearwin KE, Stayrook S, Dodd IB, Burr T, Hochschild A, Egan JB, Lewis M. The structural basis of cooperative regulation at an alternate genetic switch Molecular Cell. 21: 605-615. PMID 16507359 DOI: 10.1016/J.Molcel.2006.01.019  0.575
2005 Trusina A, Sneppen K, Dodd IB, Shearwin KE, Egan JB. Functional alignment of regulatory networks: a study of temperate phages. Plos Computational Biology. 1: e74. PMID 16477325 DOI: 10.1371/Journal.Pcbi.0010074  0.519
2005 Shearwin KE, Callen BP, Egan JB. Transcriptional interference - A crash course Trends in Genetics. 21: 339-345. PMID 15922833 DOI: 10.1016/J.Tig.2005.04.009  0.661
2005 Dodd IB, Shearwin KE, Egan JB. Revisited gene regulation in bacteriophage λ Current Opinion in Genetics and Development. 15: 145-152. PMID 15797197 DOI: 10.1016/J.Gde.2005.02.001  0.657
2005 Sneppen K, Dodd IB, Shearwin KE, Palmer AC, Schubert RA, Callen BP, Egan JB. A mathematical model for transcriptional interference by RNA polymerase traffic in Escherichia coli Journal of Molecular Biology. 346: 399-409. PMID 15670592 DOI: 10.1016/J.Jmb.2004.11.075  0.678
2004 Callen BP, Shearwin KE, Egan JB. Transcriptional interference between convergent promoters caused by elongation over the promoter Molecular Cell. 14: 647-656. PMID 15175159 DOI: 10.1016/J.Molcel.2004.05.010  0.647
2004 Dodd IB, Shearwin KE, Perkins AJ, Burr T, Hochschild A, Egan JB. Cooperativity in long-range gene regulation by the λ CI repressor Genes and Development. 18: 344-354. PMID 14871931 DOI: 10.1101/Gad.1167904  0.643
2002 Dodd IB, Egan JB. Action at a distance in CI repressor regulation of the bacteriophage 186 genetic switch Molecular Microbiology. 45: 697-710. PMID 12139616 DOI: 10.1046/j.1365-2958.2002.03038.x  0.456
2001 Neufing PJ, Shearwin KE, Egan JB. Establishing lysogenic transcription in the temperate coliphage 186 Journal of Bacteriology. 183: 2376-2379. PMID 11244081 DOI: 10.1128/JB.183.7.2376-2379.2001  0.628
2000 Shearwin KE, Egan JB. Establishment of lysogeny in bacteriophage 186. DNA binding and transcriptional activation by the CII protein Journal of Biological Chemistry. 275: 29113-29122. PMID 10871623 DOI: 10.1074/Jbc.M004574200  0.626
1998 Shearwin KE, Brumby AM, Egan JB. The tum protein of coliphage 186 is an antirepressor Journal of Biological Chemistry. 273: 5708-5715. PMID 9488703 DOI: 10.1074/jbc.273.10.5708  0.664
1997 Reed MR, Shearwin KE, Pell LM, Egan JB. The dual role of Apl in prophage induction of coliphage 186 Molecular Microbiology. 23: 669-681. PMID 9157239 DOI: 10.1046/J.1365-2958.1997.2521620.X  0.646
1997 Pountney DL, Tiwari RP, Egan JB. Metal- and DNA-binding properties and mutational analysis of the transcription activating factor, B, of coliphage 186: A prokaryotic C4 zinc- finger protein Protein Science. 6: 892-902. PMID 9098899  0.315
1996 Neufing PJ, Shearwin KE, Camerotto J, Egan JB. The CII protein of bacteriophage 186 establishes lysogeny by activating a promoter upstream of the lysogenic promoter Molecular Microbiology. 21: 751-761. PMID 8878038 DOI: 10.1046/J.1365-2958.1996.351394.X  0.662
1996 Dodd IB, Egan JB. DNA binding by the coliphage 186 repressor protein CI. The Journal of Biological Chemistry. 271: 11532-40. PMID 8626714 DOI: 10.1074/JBC.271.19.11532  0.327
1993 Dodd IB, Reed MR, Egan JB. The Cro-like Apl repressor of coliphage 186 is required for prophage excision and binds near the phage attachment site Molecular Microbiology. 10: 1139-1150. PMID 7934863  0.392
1992 Dibbens JA, Gregory SL, Egan JB. Control of gene expression in the temperate coliphage 186. X. The cl repressor directly represses transcription of the late control gene B Molecular Microbiology. 6: 2643-2650. PMID 1447973  0.377
1992 Dibbens JA, Egan JB. Control of gene expression in the temperate coliphage 186. IX. B is the sole phage function needed to activate transcription of the phage late genes Molecular Microbiology. 6: 2629-2642. PMID 1447972  0.301
1991 Gille H, Egan JB, Roth A, Messer W. The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coli Nucleic Acids Research. 19: 4167-4172. PMID 1870971 DOI: 10.1093/Nar/19.15.4167  0.32
1990 Dodd IB, Kalionis B, Egan JB. Control of gene expression in the temperate coliphage 186. VIII. Control of lysis and lysogeny by a transcriptional switch involving face-to-face promoters Journal of Molecular Biology. 214: 27-37. PMID 2370665 DOI: 10.1016/0022-2836(90)90144-B  0.43
1988 Lamont I, Kalionis B, Egan JB. Control of gene expression in the P2-related temperate coliphages. V. The use of sequence analysis of 186 vir mutants to indicate presumptive repressor binding sites Journal of Molecular Biology. 199: 379-382. PMID 3351929 DOI: 10.1016/0022-2836(88)90321-X  0.305
1986 Kalionis B, Pritchard M, Egan JB. Control of gene expression in the P2-related temperate coliphages. IV. Concerning the late control gene and control of its transcription Journal of Molecular Biology. 191: 211-220. PMID 3806671 DOI: 10.1016/0022-2836(86)90258-5  0.309
1986 Kalionis B, Dodd IB, Egan JB. Control of gene expression in the P2-related template coliphages. III. DNA sequence of the major control region of phage 186 Journal of Molecular Biology. 191: 199-209. PMID 3806670 DOI: 10.1016/0022-2836(86)90257-3  0.43
1985 Pritchard M, Egan JB. Control of gene expression in P2-related coliphages: the in vitro transcription pattern of coliphage 186. The Embo Journal. 4: 3599-3604. PMID 3912173  0.417
1981 Finnegan J, Egan JB. In vivo transcription studies of coliphage 186 Journal of Virology. 38: 987-995. PMID 6165842  0.308
1978 Küpper H, Sekiya T, Rosenberg M, Egan J, Landy A. A rho-dependent termination site in the gene coding for tyrosine tRNA su3 of Escherichia coli. Nature. 272: 423-8. PMID 345126 DOI: 10.1038/272423A0  0.316
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