| Year |
Citation |
Score |
| 2023 |
Chauhan VM, Pantazes RJ. Analysis of conformational stability of interacting residues in protein binding interfaces. Protein Engineering, Design & Selection : Peds. 36. PMID 37889566 DOI: 10.1093/protein/gzad016 |
0.358 |
|
| 2023 |
Islam S, Pantazes RJ. Developing similarity matrices for antibody-protein binding interactions. Plos One. 18: e0293606. PMID 37883504 DOI: 10.1371/journal.pone.0293606 |
0.416 |
|
| 2022 |
Chauhan VM, Pantazes RJ. MutDock: A computational docking approach for fixed-backbone protein scaffold design. Frontiers in Molecular Biosciences. 9: 933400. PMID 36106019 DOI: 10.3389/fmolb.2022.933400 |
0.456 |
|
| 2020 |
Kamath K, Reifert J, Johnston T, Gable C, Pantazes RJ, Rivera HN, McAuliffe I, Handali S, Daugherty PS. Antibody epitope repertoire analysis enables rapid antigen discovery and multiplex serology. Scientific Reports. 10: 5294. PMID 32210339 DOI: 10.1038/S41598-020-62256-9 |
0.348 |
|
| 2017 |
Entzminger KC, Hyun JM, Pantazes RJ, Patterson-Orazem AC, Qerqez AN, Frye ZP, Hughes RA, Ellington AD, Lieberman RL, Maranas CD, Maynard JA. De novo design of antibody complementarity determining regions binding a FLAG tetra-peptide. Scientific Reports. 7: 10295. PMID 28860479 DOI: 10.1038/S41598-017-10737-9 |
0.585 |
|
| 2016 |
Pantazes RJ, Reifert J, Bozekowski J, Ibsen KN, Murray JA, Daugherty PS. Identification of disease-specific motifs in the antibody specificity repertoire via next-generation sequencing. Scientific Reports. 6: 30312. PMID 27481573 DOI: 10.1038/Srep30312 |
0.319 |
|
| 2015 |
Heinzelman P, Krais J, Ruben E, Pantazes R. Engineering pH responsive fibronectin domains for biomedical applications. Journal of Biological Engineering. 9: 6. PMID 26106447 DOI: 10.1186/S13036-015-0004-1 |
0.377 |
|
| 2015 |
Pantazes RJ, Grisewood MJ, Li T, Gifford NP, Maranas CD. The Iterative Protein Redesign and Optimization (IPRO) suite of programs. Journal of Computational Chemistry. 36: 251-63. PMID 25448866 DOI: 10.1002/jcc.23796 |
0.569 |
|
| 2014 |
Li T, Pantazes RJ, Maranas CD. OptMAVEn--a new framework for the de novo design of antibody variable region models targeting specific antigen epitopes. Plos One. 9: e105954. PMID 25153121 DOI: 10.1371/journal.pone.0105954 |
0.577 |
|
| 2013 |
Grisewood MJ, Gifford NP, Pantazes RJ, Li Y, Cirino PC, Janik MJ, Maranas CD. OptZyme: computational enzyme redesign using transition state analogues. Plos One. 8: e75358. PMID 24116038 DOI: 10.1371/Journal.Pone.0075358 |
0.429 |
|
| 2013 |
Pantazes RJ, Maranas CD. MAPs: a database of modular antibody parts for predicting tertiary structures and designing affinity matured antibodies. Bmc Bioinformatics. 14: 168. PMID 23718826 DOI: 10.1186/1471-2105-14-168 |
0.575 |
|
| 2011 |
Pantazes RJ, Grisewood MJ, Maranas CD. Recent advances in computational protein design. Current Opinion in Structural Biology. 21: 467-72. PMID 21600758 DOI: 10.1016/j.sbi.2011.04.005 |
0.556 |
|
| 2010 |
Pantazes RJ, Maranas CD. OptCDR: a general computational method for the design of antibody complementarity determining regions for targeted epitope binding. Protein Engineering, Design & Selection : Peds. 23: 849-58. PMID 20847101 DOI: 10.1093/protein/gzq061 |
0.609 |
|
| 2009 |
Khoury GA, Fazelinia H, Chin JW, Pantazes RJ, Cirino PC, Maranas CD. Computational design of Candida boidinii xylose reductase for altered cofactor specificity. Protein Science : a Publication of the Protein Society. 18: 2125-38. PMID 19693930 DOI: 10.1002/Pro.227 |
0.554 |
|
| 2007 |
Pantazes RJ, Saraf MC, Maranas CD. Optimal protein library design using recombination or point mutations based on sequence-based scoring functions. Protein Engineering, Design & Selection : Peds. 20: 361-73. PMID 17686879 DOI: 10.1093/protein/gzm030 |
0.5 |
|
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