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Jodie L. Abrahams - Publications

Affiliations: 
2013-2016 Department of of Chemistry and Biomolecular Sciences Macquarie University, Macquarie Park, New South Wales, Australia 
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25/36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Campbell MP, Zhao S, Abrahams JL, Nguyen-Khuong T, Rudd PM. GlycoStore: A Platform for H/UPLC and Capillary Electrophoresis Glycan Data. Methods in Molecular Biology (Clifton, N.J.). 2370: 25-40. PMID 34611863 DOI: 10.1007/978-1-0716-1685-7_2  0.69
2021 Coff L, Abrahams JL, Collett S, Power C, Nowak BF, Kolarich D, Bott NJ, Ramsland PA. Profiling the glycome of Cardicola forsteri, a blood fluke parasitic to bluefin tuna. International Journal For Parasitology. PMID 34391752 DOI: 10.1016/j.ijpara.2021.06.004  0.59
2021 Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR. -Glycosylation in isolated rat nerve terminals. Molecular Omics. PMID 34106099 DOI: 10.1039/d0mo00044b  0.612
2020 Blazev R, Ashwood C, Abrahams JL, Chung LH, Francis D, Yang P, Watt KI, Qian H, Quaife-Ryan GA, Hudson JE, Gregorevic P, Thaysen-Andersen M, Parker BL. Integrated Glycoproteomics Identifies a Role of N-Glycosylation and Galectin-1 on Myogenesis and Muscle Development. Molecular & Cellular Proteomics : McP. 20: 100030. PMID 33583770 DOI: 10.1074/mcp.RA120.002166  0.733
2020 Blazev R, Ashwood C, Abrahams JL, Chung LH, Francis D, Yang P, Watt KI, Qian H, Quaife-Ryan GA, Hudson JE, Gregorevic P, Thaysen-Andersen M, Parker BL. Integrated glycoproteomics identifies a role of -glycosylation and galectin-1 on myogenesis and muscle development. Molecular & Cellular Proteomics : McP. PMID 32938751 DOI: 10.1074/Mcp.Ra120.002166  0.735
2019 Abrahams JL, Taherzadeh G, Jarvas G, Guttman A, Zhou Y, Campbell MP. Recent advances in glycoinformatic platforms for glycomics and glycoproteomics. Current Opinion in Structural Biology. 62: 56-69. PMID 31874386 DOI: 10.1016/J.Sbi.2019.11.009  0.36
2019 Chatterjee S, Lee LY, Kawahara R, Abrahams JL, Adamczyk B, Anugraham M, Ashwood C, Sumer-Bayraktar Z, Briggs MT, Chik JHL, Everest-Dass A, Förster S, Hinneburg H, Leite KRM, Loke I, et al. Protein Paucimannosylation is an Enriched N-glycosylation Signature of Human Cancers. Proteomics. e1900010. PMID 31419058 DOI: 10.1002/Pmic.201900010  0.695
2019 Campbell MP, Abrahams JL, Rapp E, Struwe WB, Costello CE, Novotny M, Ranzinger R, York WS, Kolarich D, Rudd PM, Kettner C. The Minimum Information Required for a Glycomics Experiment (MIRAGE) Project: LC Guidelines. Glycobiology. PMID 30778580 DOI: 10.1093/Glycob/Cwz009  0.582
2018 Zhao S, Walsh I, Abrahams JL, Royle L, Nguyen-Khuong T, Spencer D, Fernandes DL, Packer NH, Rudd PM, Campbell MP. GlycoStore: A Database of Retention Properties for Glycan Analysis. Bioinformatics (Oxford, England). PMID 29897488 DOI: 10.1093/Bioinformatics/Bty319  0.737
2017 Abrahams JL, Campbell MP, Packer NH. Building a PGC-LC-MS N-glycan retention library and elution mapping resource. Glycoconjugate Journal. PMID 28905148 DOI: 10.1007/S10719-017-9793-4  0.619
2017 Ashwood C, Abrahams JL, Nevalainen H, Packer NH. Enhancing structural characterisation of glucuronidated O-linked glycans using negative mode ion trap higher energy collision-induced dissociation mass spectrometry. Rapid Communications in Mass Spectrometry : Rcm. 31: 851-858. PMID 28277614 DOI: 10.1002/Rcm.7851  0.734
2017 Lisacek F, Mariethoz J, Alocci D, Rudd PM, Abrahams JL, Campbell MP, Packer NH, Ståhle J, Widmalm G, Mullen E, Adamczyk B, Rojas-Macias MA, Jin C, Karlsson NG. Databases and Associated Tools for Glycomics and Glycoproteomics. Methods in Molecular Biology (Clifton, N.J.). 1503: 235-264. PMID 27743371 DOI: 10.1007/978-1-4939-6493-2_18  0.593
2016 Akune Y, Lin CH, Abrahams JL, Zhang J, Packer NH, Aoki-Kinoshita KF, Campbell MP. Comprehensive analysis of the N-glycan biosynthetic pathway using bioinformatics to generate UniCorn: A theoretical N-glycan structure database. Carbohydrate Research. 431: 56-63. PMID 27318307 DOI: 10.1016/J.Carres.2016.05.012  0.669
2016 Harvey DJ, Abrahams JL. Fragmentation and ion mobility properties of negative ions from N-linked carbohydrates: Part 7. Reduced glycans. Rapid Communications in Mass Spectrometry : Rcm. 30: 627-34. PMID 26842584 DOI: 10.1002/Rcm.7467  0.321
2015 Abrahams JL, Packer NH, Campbell MP. Relative quantitation of multi-antennary N-glycan classes: combining PGC-LC-ESI-MS with exoglycosidase digestion. The Analyst. 140: 5444-9. PMID 26133503 DOI: 10.1039/C5An00691K  0.597
2014 Gotz L, Abrahams JL, Mariethoz J, Rudd PM, Karlsson NG, Packer NH, Campbell MP, Lisacek F. GlycoDigest: a tool for the targeted use of exoglycosidase digestions in glycan structure determination. Bioinformatics (Oxford, England). 30: 3131-3. PMID 25015990 DOI: 10.1093/Bioinformatics/Btu425  0.506
2014 Christiansen MN, Chik J, Lee L, Anugraham M, Abrahams JL, Packer NH. Cell surface protein glycosylation in cancer Proteomics. 14: 525-546. PMID 24339177 DOI: 10.1002/Pmic.201300387  0.726
2013 Everest-Dass AV, Abrahams JL, Kolarich D, Packer NH, Campbell MP. Structural feature ions for distinguishing N- and O-linked glycan isomers by LC-ESI-IT MS/MS Journal of the American Society For Mass Spectrometry. 24: 895-906. PMID 23605685 DOI: 10.1007/S13361-013-0610-4  0.703
2012 Pagett HE, Abrahams JL, Bones J, O'Donoghue N, Marles-Wright J, Lewis RJ, Harris JR, Caldwell GS, Rudd PM, Clare AS. Structural characterisation of the N-glycan moiety of the barnacle settlement-inducing protein complex (SIPC). The Journal of Experimental Biology. 215: 1192-8. PMID 22399665 DOI: 10.1242/Jeb.063503  0.392
2012 Saldova R, Huffman JE, Adamczyk B, Mužinić A, Kattla JJ, Pučić M, Novokmet M, Abrahams JL, Hayward C, Rudan I, Wild SH, Wright AF, PolaÅ¡ek O, Lauc G, Campbell H, et al. Association of medication with the human plasma N-glycome. Journal of Proteome Research. 11: 1821-31. PMID 22256781 DOI: 10.1021/Pr2010605  0.317
2012 Coss KP, Byrne JC, Coman DJ, Adamczyk B, Abrahams JL, Saldova R, Brown AY, Walsh O, Hendroff U, Carolan C, Rudd PM, Treacy EP. IgG N-glycans as potential biomarkers for determining galactose tolerance in Classical Galactosaemia Molecular Genetics and Metabolism. 105: 212-220. PMID 22133299 DOI: 10.1016/J.Ymgme.2011.10.018  0.33
2011 Mariño K, Lane JA, Abrahams JL, Struwe WB, Harvey DJ, Marotta M, Hickey RM, Rudd PM. Method for milk oligosaccharide profiling by 2-aminobenzamide labeling and hydrophilic interaction chromatography. Glycobiology. 21: 1317-30. PMID 21566017 DOI: 10.1093/Glycob/Cwr067  0.413
2011 Shahrokh Z, Royle L, Saldova R, Bones J, Abrahams JL, Artemenko NV, Flatman S, Davies M, Baycroft A, Sehgal S, Heartlein MW, Harvey DJ, Rudd PM. Erythropoietin produced in a human cell line (Dynepo) has significant differences in glycosylation compared with erythropoietins produced in CHO cell lines Molecular Pharmaceutics. 8: 286-296. PMID 21138277 DOI: 10.1021/Mp100353A  0.361
2010 Lauc G, Essafi A, Huffman JE, Hayward C, Knežević A, Kattla JJ, PolaÅ¡ek O, Gornik O, Vitart V, Abrahams JL, Pučić M, Novokmet M, Redžić I, Campbell S, Wild SH, et al. Genomics meets glycomics-the first GWAS study of human N-Glycome identifies HNF1α as a master regulator of plasma protein fucosylation. Plos Genetics. 6: e1001256. PMID 21203500 DOI: 10.1371/Journal.Pgen.1001256  0.386
2008 Royle L, Campbell MP, Radcliffe CM, White DM, Harvey DJ, Abrahams JL, Kim YG, Henry GW, Shadick NA, Weinblatt ME, Lee DM, Rudd PM, Dwek RA. HPLC-based analysis of serum N-glycans on a 96-well plate platform with dedicated database software. Analytical Biochemistry. 376: 1-12. PMID 18194658 DOI: 10.1016/J.Ab.2007.12.012  0.386
Low-probability matches (unlikely to be authored by this person)
2010 Pierce A, Saldova R, Abd Hamid UM, Abrahams JL, McDermott EW, Evoy D, Duffy MJ, Rudd PM. Levels of specific glycans significantly distinguish lymph node-positive from lymph node-negative breast cancer patients Glycobiology. 20: 1283-1288. PMID 20581008 DOI: 10.1093/Glycob/Cwq090  0.285
2020 Kumpel BM, Saldova R, Koeleman CAM, Abrahams JL, Ederveen AH, Armour KL, Olovnikova NI, Vidarsson G, Kapur R, Rudd PM, Wuhrer M. Anti-D monoclonal antibodies from 23 human and rodent cell lines display diverse IgG Fc-glycosylation profiles that determine their clinical efficacy. Scientific Reports. 10: 1464. PMID 32001734 DOI: 10.1038/S41598-019-57393-9  0.265
2022 Shewell LK, Day CJ, Kutasovic JR, Abrahams JL, Wang J, Poole J, Niland C, Ferguson K, Saunus JM, Lakhani SR, von Itzstein M, Paton JC, Paton AW, Jennings MP. N-glycolylneuraminic acid serum biomarker levels are elevated in breast cancer patients at all stages of disease. Bmc Cancer. 22: 334. PMID 35346112 DOI: 10.1186/s12885-022-09428-0  0.257
2008 Banda NK, Wood AK, Takahashi K, Levitt B, Rudd PM, Royle L, Abrahams JL, Stahl GL, Holers VM, Arend WP. Initiation of the alternative pathway of murine complement by immune complexes is dependent on N-glycans in IgG antibodies Arthritis and Rheumatism. 58: 3081-3089. PMID 18821684 DOI: 10.1002/Art.23865  0.248
2023 Chernykh A, Abrahams JL, Grant OC, Kambanis L, Sumer-Bayraktar Z, Ugonotti J, Kawahara R, Corcilius L, Payne RJ, Woods RJ, Thaysen-Andersen M. Position-specific N- and O-glycosylation of the reactive centre loop impacts neutrophil elastase-mediated proteolysis of corticosteroid-binding globulin. The Journal of Biological Chemistry. 105519. PMID 38042488 DOI: 10.1016/j.jbc.2023.105519  0.244
2013 Collins ES, Galligan MC, Saldova R, Adamczyk B, Abrahams JL, Campbell MP, Ng CT, Veale DJ, Murphy TB, Rudd PM, FitzGerald O. Glycosylation status of serum in inflammatory arthritis in response to anti-TNF treatment Rheumatology (United Kingdom). 52: 1572-1582. PMID 23681398 DOI: 10.1093/Rheumatology/Ket189  0.241
2012 Troelsen LN, Jacobsen S, Abrahams JL, Royle L, Rudd PM, Narvestad E, Heegaard NH, Garred P. IgG glycosylation changes and MBL2 polymorphisms: Associations with markers of systemic inflammation and joint destruction in rheumatoid arthritis Journal of Rheumatology. 39: 463-469. PMID 22247351 DOI: 10.3899/Jrheum.110584  0.219
2010 McVicar CM, Colhoun LM, Abrahams JL, Kitson CL, Hamilton R, Medina RJ, Durga D, Gardiner TA, Rudd PM, Stitt AW. Differential modulation of angiogenesis by erythropoiesis-stimulating agents in a mouse model of ischaemic retinopathy Plos One. 5. PMID 20686695 DOI: 10.1371/Journal.Pone.0011870  0.215
2023 Jen FE, Abrahams JL, Schulz BL, Lamelas A, Pluschke G, Jennings MP. High-Frequency Changes in Pilin Glycosylation Patterns during Serogroup a Meningitis Outbreaks in the African Meningitis Belt. Acs Infectious Diseases. PMID 37467082 DOI: 10.1021/acsinfecdis.3c00149  0.172
2016 Harvey DJ, Abrahams JL. Fragmentation and ion mobility properties of negative ions from N-linked carbohydrates: Part 7. Reduced glycans Rapid Communications in Mass Spectrometry. 30: 627-634. DOI: 10.1002/rcm.7467  0.139
2009 Mimura Y, Jefferis R, Mimura-Kimura Y, Abrahams J, Rudd PM. Glycosylation of Therapeutic IgGs Therapeutic Monoclonal Antibodies: From Bench to Clinic. 67-89. DOI: 10.1002/9780470485408.ch3  0.122
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