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Thanaphong Phongpreecha - Publications

Affiliations: 
Stanford University, Palo Alto, CA 
Area:
Bioinformatics
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27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Montine KS, Berson E, Phongpreecha T, Huang Z, Aghaeepour N, Zou JY, MacCoss MJ, Montine TJ. Understanding the molecular basis of resilience to Alzheimer's disease. Frontiers in Neuroscience. 17: 1311157. PMID 38192507 DOI: 10.3389/fnins.2023.1311157  0.616
2023 Becker M, Nassar H, Espinosa C, Stelzer IA, Feyaerts D, Berson E, Bidoki NH, Chang AL, Saarunya G, Culos A, De Francesco D, Fallahzadeh R, Liu Q, Kim Y, Marić I, ... ... Phongpreecha T, et al. Large-scale correlation network construction for unraveling the coordination of complex biological systems. Nature Computational Science. 3: 346-359. PMID 38116462 DOI: 10.1038/s43588-023-00429-y  0.502
2023 Phongpreecha T, Godrich D, Berson E, Espinosa C, Kim Y, Cholerton B, Chang AL, Mataraso S, Bukhari SA, Perna A, Yakabi K, Montine KS, Poston KL, Mormino E, White L, et al. Quantitative estimate of cognitive resilience and its medical and genetic associations. Alzheimer's Research & Therapy. 15: 192. PMID 37926851 DOI: 10.1186/s13195-023-01329-z  0.599
2023 Ravindra NG, Espinosa C, Berson E, Phongpreecha T, Zhao P, Becker M, Chang AL, Shome S, Marić I, De Francesco D, Mataraso S, Saarunya G, Thuraiappah M, Xue L, Gaudillière B, et al. Deep representation learning identifies associations between physical activity and sleep patterns during pregnancy and prematurity. Npj Digital Medicine. 6: 171. PMID 37770643 DOI: 10.1038/s41746-023-00911-x  0.53
2023 Berson E, Gajera CR, Phongpreecha T, Perna A, Bukhari SA, Becker M, Chang AL, De Francesco D, Espinosa C, Ravindra NG, Postupna N, Latimer CS, Shively CA, Register TC, Craft S, et al. Cross-species comparative analysis of single presynapses. Scientific Reports. 13: 13849. PMID 37620363 DOI: 10.1038/s41598-023-40683-8  0.584
2023 Berson E, Sreenivas A, Phongpreecha T, Perna A, Grandi FC, Xue L, Ravindra NG, Payrovnaziri N, Mataraso S, Kim Y, Espinosa C, Chang AL, Becker M, Montine KS, Fox EJ, et al. Whole genome deconvolution unveils Alzheimer's resilient epigenetic signature. Nature Communications. 14: 4947. PMID 37587197 DOI: 10.1038/s41467-023-40611-4  0.61
2023 Espinosa CA, Khan W, Khanam R, Das S, Khalid J, Pervin J, Kasaro MP, Contrepois K, Chang AL, Phongpreecha T, Michael B, Ellenberger M, Mehmood U, Hotwani A, Nizar A, et al. Multiomic signals associated with maternal epidemiological factors contributing to preterm birth in low- and middle-income countries. Science Advances. 9: eade7692. PMID 37224249 DOI: 10.1126/sciadv.ade7692  0.543
2023 De Francesco D, Reiss JD, Roger J, Tang AS, Chang AL, Becker M, Phongpreecha T, Espinosa C, Morin S, Berson E, Thuraiappah M, Le BL, Ravindra NG, Payrovnaziri SN, Mataraso S, et al. Data-driven longitudinal characterization of neonatal health and morbidity. Science Translational Medicine. 15: eadc9854. PMID 36791208 DOI: 10.1126/scitranslmed.adc9854  0.542
2023 Phongpreecha T, Cholerton B, Bhukari S, Chang AL, De Francesco D, Thuraiappah M, Godrich D, Perna A, Becker MG, Ravindra NG, Espinosa C, Kim Y, Berson E, Mataraso S, Sha SJ, et al. Prediction of neuropathologic lesions from clinical data. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 36681388 DOI: 10.1002/alz.12921  0.584
2022 Becker M, Dai J, Chang AL, Feyaerts D, Stelzer IA, Zhang M, Berson E, Saarunya G, De Francesco D, Espinosa C, Kim Y, Marić I, Mataraso S, Payrovnaziri SN, Phongpreecha T, et al. Revealing the impact of lifestyle stressors on the risk of adverse pregnancy outcomes with multitask machine learning. Frontiers in Pediatrics. 10: 933266. PMID 36582513 DOI: 10.3389/fped.2022.933266  0.696
2022 Fallahzadeh R, Bidoki NH, Stelzer IA, Becker M, Marić I, Chang AL, Culos A, Phongpreecha T, Xenochristou M, De Francesco D, Espinosa C, Berson E, Verdonk F, Angst MS, Gaudilliere B, et al. In-Silico Generation of High-Dimensional Immune Response Data in Patients using a Deep Neural Network. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 36507780 DOI: 10.1002/cyto.a.24709  0.549
2022 De Francesco D, Blumenfeld YJ, Marić I, Mayo JA, Chang AL, Fallahzadeh R, Phongpreecha T, Butwick AJ, Xenochristou M, Phibbs CS, Bidoki NH, Becker M, Culos A, Espinosa C, Liu Q, et al. A data-driven health index for neonatal morbidities. Iscience. 25: 104143. PMID 35402862 DOI: 10.1016/j.isci.2022.104143  0.528
2021 Fallahzadeh R, Verdonk F, Ganio E, Culos A, Stanley N, Marić I, Chang AL, Becker M, Phongpreecha T, Xenochristou M, De Francesco D, Espinosa C, Gao X, Tsai A, Sultan P, et al. Objective Activity Parameters Track Patient-Specific Physical Recovery Trajectories After Surgery and Link With Individual Preoperative Immune States. Annals of Surgery. PMID 35129529 DOI: 10.1097/SLA.0000000000005250  0.486
2021 Phongpreecha T, Gajera CR, Liu CC, Vijayaragavan K, Chang AL, Becker M, Fallahzadeh R, Fernandez R, Postupna N, Sherfield E, Tebaykin D, Latimer C, Shively CA, Register TC, Craft S, et al. Single-synapse analyses of Alzheimer's disease implicate pathologic tau, DJ1, CD47, and ApoE. Science Advances. 7: eabk0473. PMID 34910503 DOI: 10.1126/sciadv.abk0473  0.573
2020 Phongpreecha T, Cholerton B, Mata IF, Zabetian CP, Poston KL, Aghaeepour N, Tian L, Quinn JF, Chung KA, Hiller AL, Hu SC, Edwards KL, Montine TJ. Multivariate prediction of dementia in Parkinson's disease. Npj Parkinson's Disease. 6: 20. PMID 34429432 DOI: 10.1038/s41531-020-00121-2  0.61
2020 Culos A, Tsai AS, Stanley N, Becker M, Ghaemi MS, McIlwain DR, Fallahzadeh R, Tanada A, Nassar H, Espinosa C, Xenochristou M, Ganio E, Peterson L, Han X, Stelzer IA, ... ... Phongpreecha T, et al. Integration of mechanistic immunological knowledge into a machine learning pipeline improves predictions. Nature Machine Intelligence. 2: 619-628. PMID 33294774 DOI: 10.1038/s42256-020-00232-8  0.571
2020 Phongpreecha T, Fernandez R, Mrdjen D, Culos A, Gajera CR, Wawro AM, Stanley N, Gaudilliere B, Poston KL, Aghaeepour N, Montine TJ. Single-cell peripheral immunoprofiling of Alzheimer's and Parkinson's diseases. Science Advances. 6. PMID 33239300 DOI: 10.1126/sciadv.abd5575  0.625
2020 Phongpreecha T, Cholerton B, Mata IF, Zabetian CP, Poston KL, Aghaeepour N, Tian L, Quinn JF, Chung KA, Hiller AL, Hu SC, Edwards KL, Montine TJ. Multivariate prediction of dementia in Parkinson's disease. Npj Parkinson's Disease. 6: 20. PMID 32885039 DOI: 10.1038/S41531-020-00121-2  0.61
2020 Tawfik VL, Huck NA, Baca QJ, Ganio EA, Haight ES, Culos A, Ghaemi S, Phongpreecha T, Angst MS, Clark JD, Aghaeepour N, Gaudilliere B. Systematic Immunophenotyping Reveals Sex-Specific Responses After Painful Injury in Mice. Frontiers in Immunology. 11: 1652. PMID 32849569 DOI: 10.3389/fimmu.2020.01652  0.475
2020 Phongpreecha T, Christy KF, Singh SK, Hao P, Hodge DB. Effect of catalyst and reaction conditions on aromatic monomer yields, product distribution, and sugar yields during lignin hydrogenolysis of silver birch wood. Bioresource Technology. 316: 123907. PMID 32739581 DOI: 10.1016/j.biortech.2020.123907  0.317
2020 Stanley N, Stelzer IA, Tsai AS, Fallahzadeh R, Ganio E, Becker M, Phongpreecha T, Nassar H, Ghaemi S, Maric I, Culos A, Chang AL, Xenochristou M, Han X, Espinosa C, et al. VoPo leverages cellular heterogeneity for predictive modeling of single-cell data. Nature Communications. 11: 3738. PMID 32719375 DOI: 10.1038/S41467-020-17569-8  0.558
2020 Saulnier BK, Phongpreecha T, Singh SK, Hodge DB. Impact of dilute acid pretreatment conditions on p-coumarate removal in diverse maize lines. Bioresource Technology. 314: 123750. PMID 32622284 DOI: 10.1016/j.biortech.2020.123750  0.327
2019 Bhalla A, Cai CM, Xu F, Singh SK, Bansal N, Phongpreecha T, Dutta T, Foster CE, Kumar R, Simmons BA, Singh S, Wyman CE, Hegg EL, Hodge DB. Performance of three delignifying pretreatments on hardwoods: hydrolysis yields, comprehensive mass balances, and lignin properties. Biotechnology For Biofuels. 12: 213. PMID 31516552 DOI: 10.1186/S13068-019-1546-0  0.336
2019 Phongpreecha T, Liu J, Hodge DB, Qi Y. Adsorption of Lignin β-O-4 Dimers on Metal Surfaces in Vacuum and Solvated Environments Acs Sustainable Chemistry & Engineering. 7: 2667-2678. DOI: 10.1021/Acssuschemeng.8B05736  0.451
2018 Bhalla A, Bansal N, Pattathil S, Li M, Shen W, Particka CA, Karlen SD, Phongpreecha T, Semaan RR, Gonzales-Vigil E, Ralph J, Mansfield SD, Ding S, Hodge DB, Hegg EL. Engineered Lignin in Poplar Biomass Facilitates Cu-Catalyzed Alkaline-Oxidative Pretreatment Acs Sustainable Chemistry & Engineering. 6: 2932-2941. DOI: 10.1021/Acssuschemeng.7B02067  0.32
2017 Phongpreecha T, Hool NC, Stoklosa RJ, Klett AS, Foster CE, Bhalla A, Holmes D, Thies MC, Hodge DB. Predicting lignin depolymerization yields from quantifiable properties using fractionated biorefinery lignins Green Chem.. 19: 5131-5143. DOI: 10.1039/C7Gc02023F  0.352
2017 Klett AS, Payne AM, Phongpreecha T, Hodge DB, Thies MC. Benign Fractionation of Lignin with CO2-Expanded Solvents of Acetic Acid + Water Industrial & Engineering Chemistry Research. 56: 9778-9782. DOI: 10.1021/Acs.Iecr.7B02272  0.316
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