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Melissa R. Pergande - Publications

Affiliations: 
Northwestern University Feinberg School of Medicine, Chicago, IL, United States 
Area:
Biological Mass Spectrometry
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36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Wancewicz B, Pergande MR, Zhu Y, Gao Z, Shi Z, Plouff K, Ge Y. Comprehensive Metabolomic Analysis of Human Heart Tissue Enabled by Parallel Metabolite Extraction and High-Resolution Mass Spectrometry. Analytical Chemistry. PMID 38568106 DOI: 10.1021/acs.analchem.3c04353  0.452
2024 Bayne EF, Buck KM, Towler AG, Zhu Y, Pergande MR, Zhou T, Price S, Rossler KJ, Morales-Tirado V, Lloyd S, Wang F, He Y, Tian Y, Ge Y. High-Throughput Extracellular Matrix Proteomics of Human Lungs Enabled by Photocleavable Surfactant and diaPASEF. Journal of Proteome Research. PMID 38315831 DOI: 10.1021/acs.jproteome.3c00532  0.435
2023 Pergande MR, Osterbauer KJ, Buck KM, Roberts DS, Wood NN, Balasubramanian P, Mann MW, Rossler KJ, Diffee GM, Colman RJ, Anderson RM, Ge Y. Mass Spectrometry-Based Multiomics Identifies Metabolic Signatures of Sarcopenia in Rhesus Monkey Skeletal Muscle. Journal of Proteome Research. PMID 37991985 DOI: 10.1021/acs.jproteome.3c00474  0.467
2023 Horvath JD, Casas M, Kutchukian C, Sánchez SC, Pergande MR, Cologna SM, Simó S, Dixon RE, Dickson EJ. α-Synuclein-dependent increases in PIP5K1γ drive inositol signaling to promote neurotoxicity. Cell Reports. 42: 113244. PMID 37838947 DOI: 10.1016/j.celrep.2023.113244  0.551
2023 Wancewicz B, Pergande MR, Zhu Y, Gao Z, Shi Z, Plouff K, Ge Y. Comprehensive Metabolomic Analysis of Human Heart Tissue Enabled by Parallel Metabolite Extraction and High-Resolution Mass Spectrometry. Biorxiv : the Preprint Server For Biology. PMID 37745334 DOI: 10.1101/2023.09.15.558013  0.45
2023 Pergande MR, Osterbauer KJ, Buck KM, Roberts DS, Wood NN, Balasubramanian P, Mann MW, Rossler K, Diffee GM, Colman RJ, Anderson RM, Ge Y. Mass spectrometry-based multi-omics identifies metabolic signatures of sarcopenia in rhesus monkey skeletal muscle. Biorxiv : the Preprint Server For Biology. PMID 37577600 DOI: 10.1101/2023.07.31.551315  0.468
2023 Khamidova N, Pergande MR, Pathmasiri KC, Khan R, Mohr JT, Cologna SM. DBDA Matrix Increases Ion Abundance of Fatty Acids and Sulfatides in MALDI-TOF and Mass Spectrometry Imaging Studies. Journal of the American Society For Mass Spectrometry. PMID 37424084 DOI: 10.1021/jasms.3c00061  0.592
2023 Larson EJ, Pergande MR, Moss ME, Rossler KJ, Wenger RK, Krichel B, Josyer H, Melby JA, Roberts DS, Pike K, Shi Z, Chan HJ, Knight B, Rogers HT, Brown KA, et al. MASH Native: A Unified Solution for Native Top-Down Proteomics Data Processing. Bioinformatics (Oxford, England). PMID 37294807 DOI: 10.1093/bioinformatics/btad359  0.425
2023 Cologna SM, Pathmasiri KC, Pergande MR, Rosenhouse-Dantsker A. Alterations in Cholesterol and Phosphoinositides Levels in the Intracellular Cholesterol Trafficking Disorder NPC. Advances in Experimental Medicine and Biology. 1422: 143-165. PMID 36988880 DOI: 10.1007/978-3-031-21547-6_5  0.597
2023 Cougnoux A, Pergande MR, Serna-Perez F, Cologna SM. Investigation of 2-Hydroxypropyl-β-Cyclodextrin Treatment in a Neuronal-Like Cell Model of Niemann-Pick Type C Using Quantitative Proteomics. Journal of the American Society For Mass Spectrometry. 34: 668-675. PMID 36920149 DOI: 10.1021/jasms.2c00342  0.59
2023 Khamidova N, Pergande MR, Pathmasiri KC, Khan R, Mohr JT, Cologna SM. DBDA matrix increases ion abundance of fatty acids and sulfatides in MALDI-TOF and mass spectrometry imaging studies. Biorxiv : the Preprint Server For Biology. PMID 36711800 DOI: 10.1101/2023.01.13.524013  0.589
2023 Larson EJ, Pergande MR, Moss ME, Rossler KJ, Wenger RK, Krichel B, Josyer H, Melby JA, Roberts DS, Pike K, Shi Z, Chan HJ, Knight B, Rogers HT, Brown KA, et al. MASH Native: A Unified Solution for Native Top-Down Proteomics Data Processing. Biorxiv : the Preprint Server For Biology. PMID 36711733 DOI: 10.1101/2023.01.02.522513  0.408
2023 Li W, Pergande MR, Crutchfield CA, Searle BC, Backlund PS, Picache JA, Burkert K, Yanjanin-Farhat NM, Blank PS, Toth CL, Wassif CA, Porter FD, Cologna SM. A Differential Proteomics Study of Cerebrospinal Fluid from Individuals with Niemann-Pick Disease, Type C1. Proteomics. e2200378. PMID 36638187 DOI: 10.1002/pmic.202200378  0.607
2022 Salvi A, Hardy LR, Heath KN, Watry S, Pergande MR, Cologna SM, Burdette JE. PAX8 modulates the tumor microenvironment of high grade serous ovarian cancer through changes in the secretome. Neoplasia (New York, N.Y.). 36: 100866. PMID 36586182 DOI: 10.1016/j.neo.2022.100866  0.591
2022 Bergsten TM, Levy SE, Zink KE, Lusk HJ, Pergande MR, Cologna SM, Burdette JE, Sanchez LM. Fallopian tube secreted protein affects ovarian metabolites in high grade serous ovarian cancer. Frontiers in Cell and Developmental Biology. 10: 1042734. PMID 36420136 DOI: 10.3389/fcell.2022.1042734  0.597
2022 Singaram I, Sharma A, Pant S, Lihan M, Park MJ, Pergande M, Buwaneka P, Hu Y, Mahmud N, Kim YM, Cologna S, Gevorgyan V, Khan I, Tajkhorshid E, Cho W. Targeting lipid-protein interaction to treat Syk-mediated acute myeloid leukemia. Nature Chemical Biology. PMID 36229686 DOI: 10.1038/s41589-022-01150-z  0.572
2022 Park HS, Chugh RM, Pergande MR, Cetin E, Siblini H, Esfandyari S, Cologna SM, Al-Hendy A. Non-Cytokine Protein Profile of the Mesenchymal Stem Cell Secretome That Regulates the Androgen Production Pathway. International Journal of Molecular Sciences. 23. PMID 35563028 DOI: 10.3390/ijms23094633  0.602
2022 Wang ZY, Pergande MR, Ragsdale CW, Cologna SM. Steroid hormones of the octopus self-destruct system. Current Biology : Cb. PMID 35561680 DOI: 10.1016/j.cub.2022.04.043  0.573
2022 Pergande MR, Kang C, George D, Sutter PA, Crocker SJ, Cologna SM, Givogri MI. Lipidomic analysis identifies age-disease-related changes and potential new biomarkers in brain-derived extracellular vesicles from metachromatic leukodystrophy mice. Lipids in Health and Disease. 21: 32. PMID 35351138 DOI: 10.1186/s12944-022-01644-8  0.607
2022 Salvi A, Young AN, Huntsman AC, Pergande MR, Korkmaz MA, Rathnayake RA, Mize BK, Kinghorn AD, Zhang X, Ratia K, Schirle M, Thomas JR, Brittain SM, Shelton C, Aldrich LN, et al. PHY34 inhibits autophagy through V-ATPase V0A2 subunit inhibition and CAS/CSE1L nuclear cargo trafficking in high grade serous ovarian cancer. Cell Death & Disease. 13: 45. PMID 35013112 DOI: 10.1038/s41419-021-04495-w  0.59
2021 Pergande MR, Amoroso VG, Nguyen TTA, Li W, Vice E, Park TJ, Cologna SM. PPARα and PPARγ Signaling Is Enhanced in the Brain of the Naked Mole-Rat, a Mammal that Shows Intrinsic Neuroprotection from Oxygen Deprivation. Journal of Proteome Research. PMID 34351155 DOI: 10.1021/acs.jproteome.1c00131  0.6
2020 Frankel D, Davies M, Bhushan B, Kulaberoglu Y, Urriola-Munoz P, Bertrand-Michel J, Pergande MR, Smith AA, Preet S, Park TJ, Vendruscolo M, Rankin KS, Cologna SM, Kumita JR, Cenac N, et al. Cholesterol-rich naked mole-rat brain lipid membranes are susceptible to amyloid beta-induced damage . Aging. 12. PMID 33147569 DOI: 10.18632/aging.202138  0.572
2020 Olson MT, Yergey AL, Mukherjee K, Pergande MR, Bane SL, Cologna SM, Sackett DL. Taurine is covalently incorporated into alpha tubulin. Journal of Proteome Research. PMID 32400163 DOI: 10.1021/Acs.Jproteome.0C00147  0.576
2020 Pathmasiri KC, Pergande MR, Tobias F, Rebiai R, Rosenhouse-Dantsker A, Bongarzone ER, Cologna SM. Mass spectrometry imaging and LC-MS reveal decreased cerebellar phosphoinositides in Niemann-Pick type C1-null mice. Journal of Lipid Research. PMID 32371566 DOI: 10.1194/Jlr.Ra119000606  0.621
2020 Tobin MK, Stephen TKL, Lopez KL, Pergande MR, Bartholomew AM, Cologna SM, Lazarov O. Activated Mesenchymal Stem Cells Induce Recovery Following Stroke Via Regulation of Inflammation and Oligodendrogenesis. Journal of the American Heart Association. 9: e013583. PMID 32204666 DOI: 10.1161/Jaha.119.013583  0.558
2020 Teclemariam ET, Pergande MR, Cologna SM. Considerations for mass spectrometry based multi-omic analysis of clinical samples. Expert Review of Proteomics. PMID 31996049 DOI: 10.1080/14789450.2020.1724540  0.594
2019 Mazinani SA, Noaman N, Pergande MR, Cologna SM, Coorssen J, Yan H. Exposure to microwave irradiation at constant culture temperature slows the growth of DE3 cells, leading to modified proteomic profiles. Rsc Advances. 9: 11810-11817. PMID 35517035 DOI: 10.1039/c9ra00617f  0.595
2019 Pergande MR, Serna-Perez F, Mohsin SB, Hanek J, Cologna SM. Lipidomic Analysis Reveals Altered Fatty Acid Metabolism in the Liver of the Symptomatic Niemann-Pick, Type C1 Mouse Model. Proteomics. e1800285. PMID 31394590 DOI: 10.1002/Pmic.201800285  0.6
2019 Hardy LR, Pergande MR, Esparza K, Heath KN, Önyüksel H, Cologna SM, Burdette JE. Proteomic analysis reveals a role for PAX8 in peritoneal colonization of high grade serous ovarian cancer that can be targeted with micelle encapsulated thiostrepton. Oncogene. PMID 31296958 DOI: 10.1038/S41388-019-0842-2  0.589
2019 Pergande MR, Zarate E, Haney-Ball C, Davidson CD, Scesa G, Givogri MI, Bongarzone ER, Cologna SM. Standard-flow LC and thermal focusing ESI elucidates altered liver proteins in late stage Niemann-Pick, type C1 disease. Bioanalysis. 11: 1067-1083. PMID 31251104 DOI: 10.4155/Bio-2018-0232  0.61
2019 Kurgan N, Noaman N, Pergande MR, Cologna SM, Coorssen JR, Klentrou P. Changes to the Human Serum Proteome in Response to High Intensity Interval Exercise: A Sequential Top-Down Proteomic Analysis. Frontiers in Physiology. 10: 362. PMID 31001142 DOI: 10.3389/Fphys.2019.00362  0.563
2019 Pergande MR, Nguyen TTA, Haney-Ball C, Davidson CD, Cologna SM. Quantitative, label-free proteomics in the symptomatic Niemann-Pick, type C1 mouse model using standard flow liquid chromatography and thermal focusing electrospray ionization. Proteomics. e1800432. PMID 30888112 DOI: 10.1002/Pmic.201800432  0.641
2019 Pergande MR, Cougnoux A, Rathnayake RAC, Porter FD, Cologna SM. Differential Proteomics Reveals miR-155 as a Novel Indicator of Liver and Spleen Pathology in the Symptomatic Niemann-Pick Disease, Type C1 Mouse Model. Molecules (Basel, Switzerland). 24. PMID 30870990 DOI: 10.3390/Molecules24050994  0.596
2019 Mazinani SA, Noaman N, Pergande MR, Cologna S, Coorssen J, Yan H. Exposure to microwave irradiation at constant culture temperature slows the growth of Escherichia coli DE3 cells, leading to modified proteomic profiles Rsc Advances. 9: 11810-11817. DOI: 10.1039/C9Ra00617F  0.545
2018 Hardy L, Pergande M, Hernandez A, Cologna S, Burdette J. Abstract 4039: PAX8 increases migration and metastasis of high grade serous ovarian cancer through upregulation of Rho GTPases Cancer Research. 78: 4039-4039. DOI: 10.1158/1538-7445.Am2018-4039  0.58
2017 Pergande MR, Cologna SM. Isoelectric Point Separations of Peptides and Proteins. Proteomes. 5. PMID 28248255 DOI: 10.3390/Proteomes5010004  0.556
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