| Year |
Citation |
Score |
| 2023 |
Yamashita S, Tomita K. Mechanism of U6 snRNA oligouridylation by human TUT1. Nature Communications. 14: 4686. PMID 37563152 DOI: 10.1038/s41467-023-40420-9 |
0.729 |
|
| 2023 |
Nagato Y, Yamashita S, Ohashi A, Furukawa H, Takai K, Tomita K, Tomikawa C. Mechanism of tRNA recognition by heterotetrameric glycyl-tRNA synthetase from lactic acid bacteria. Journal of Biochemistry. PMID 37261968 DOI: 10.1093/jb/mvad043 |
0.667 |
|
| 2023 |
Ju J, Aoyama T, Yashiro Y, Yamashita S, Kuroyanagi H, Tomita K. Structure of the Caenorhabditis elegans m6A methyltransferase METT10 that regulates SAM homeostasis. Nucleic Acids Research. 51: 2434-2446. PMID 36794723 DOI: 10.1093/nar/gkad081 |
0.785 |
|
| 2022 |
Ohira T, Minowa K, Sugiyama K, Yamashita S, Sakaguchi Y, Miyauchi K, Noguchi R, Kaneko A, Orita I, Fukui T, Tomita K, Suzuki T. Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance. Nature. PMID 35477761 DOI: 10.1038/s41586-022-04677-2 |
0.725 |
|
| 2020 |
Aoyama T, Yamashita S, Tomita K. Mechanistic insights into m6A modification of U6 snRNA by human METTL16. Nucleic Acids Research. 48: 5157-5168. PMID 32266935 DOI: 10.1093/Nar/Gkaa227 |
0.759 |
|
| 2020 |
Liu Y, Martinez A, Yamashita S, Tomita K. Crystal structure of human cytoplasmic tRNAHis-specific 5'-monomethylphosphate capping enzyme. Nucleic Acids Research. PMID 31919512 DOI: 10.2210/Pdb6L8U/Pdb |
0.788 |
|
| 2019 |
Yamashita S, Nagaike T, Tomita K. Crystal structure of the Lin28-interacting module of human terminal uridylyltransferase that regulates let-7 expression. Nature Communications. 10: 1960. PMID 31036859 DOI: 10.1038/S41467-019-09966-5 |
0.776 |
|
| 2019 |
Yashiro Y, Yamashita S, Tomita K. Crystal Structure of the Enterohemorrhagic Escherichia coli AtaT-AtaR Toxin-Antitoxin Complex. Structure (London, England : 1993). 27: 476-484.e3. PMID 30612860 DOI: 10.2210/Pdb6Ajn/Pdb |
0.748 |
|
| 2018 |
Taniguchi T, Miyauchi K, Sakaguchi Y, Yamashita S, Soma A, Tomita K, Suzuki T. Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis. Nature Chemical Biology. PMID 30150682 DOI: 10.1038/S41589-018-0119-Z |
0.667 |
|
| 2017 |
Yamashita S, Takagi Y, Nagaike T, Tomita K. Crystal structures of U6 snRNA-specific terminal uridylyltransferase. Nature Communications. 8: 15788. PMID 28589955 DOI: 10.1038/Ncomms15788 |
0.757 |
|
| 2017 |
Martinez A, Yamashita S, Nagaike T, Sakaguchi Y, Suzuki T, Tomita K. Human BCDIN3D monomethylates cytoplasmic histidine transfer RNA. Nucleic Acids Research. PMID 28119416 DOI: 10.1093/Nar/Gkx051 |
0.758 |
|
| 2016 |
Mannen T, Yamashita S, Tomita K, Goshima N, Hirose T. The Sam68 nuclear body is composed of two RNase-sensitive substructures joined by the adaptor HNRNPL. The Journal of Cell Biology. 214: 45-59. PMID 27377249 DOI: 10.1083/Jcb.201601024 |
0.709 |
|
| 2016 |
Yamashita S, Tomita K. Mechanism of 3'-Matured tRNA Discrimination from 3'-Immature tRNA by Class-II CCA-Adding Enzyme. Structure (London, England : 1993). 24: 918-25. PMID 27133023 DOI: 10.1016/J.Str.2016.03.022 |
0.715 |
|
| 2015 |
Yamashita S, Martinez A, Tomita K. Measurement of Acceptor-TΨC Helix Length of tRNA for Terminal A76-Addition by A-Adding Enzyme. Structure (London, England : 1993). 23: 830-42. PMID 25914059 DOI: 10.1016/J.Str.2015.03.013 |
0.744 |
|
| 2014 |
Takeshita D, Yamashita S, Tomita K. Molecular insights into replication initiation by Qβ replicase using ribosomal protein S1. Nucleic Acids Research. 42: 10809-22. PMID 25122749 DOI: 10.1093/Nar/Gku745 |
0.797 |
|
| 2014 |
Tomita K, Yamashita S. Molecular mechanisms of template-independent RNA polymerization by tRNA nucleotidyltransferases. Frontiers in Genetics. 5: 36. PMID 24596576 DOI: 10.3389/Fgene.2014.00036 |
0.741 |
|
| 2014 |
Yamashita S, Takeshita D, Tomita K. Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase. Structure (London, England : 1993). 22: 315-25. PMID 24389024 DOI: 10.1016/J.Str.2013.12.002 |
0.77 |
|
| 2012 |
Takeshita D, Yamashita S, Tomita K. Mechanism for template-independent terminal adenylation activity of Qβ replicase. Structure (London, England : 1993). 20: 1661-9. PMID 22884418 DOI: 10.1016/J.Str.2012.07.004 |
0.796 |
|
| 2011 |
Yamashita S, Nagata T, Kawazoe M, Takemoto C, Kigawa T, Güntert P, Kobayashi N, Terada T, Shirouzu M, Wakiyama M, Muto Y, Yokoyama S. Structures of the first and second double-stranded RNA-binding domains of human TAR RNA-binding protein. Protein Science : a Publication of the Protein Society. 20: 118-30. PMID 21080422 DOI: 10.1002/pro.543 |
0.446 |
|
| Show low-probability matches. |