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Xiangda Peng - Publications

Affiliations: 
Department of Biochemistry and Molecular Biology University of Chicago, Chicago, IL 
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7 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Zhang N, Sood D, Guo SC, Chen N, Antoszewski A, Marianchuk T, Dey S, Xiao Y, Hong L, Peng X, Baxa M, Partch C, Wang LP, Sosnick TR, Dinner AR, et al. Temperature-dependent fold-switching mechanism of the circadian clock protein KaiB. Proceedings of the National Academy of Sciences of the United States of America. 121: e2412327121. PMID 39671178 DOI: 10.1073/pnas.2412327121  0.737
2024 Zhang N, Sood D, Guo SC, Chen N, Antoszewski A, Marianchuk T, Chavan A, Dey S, Xiao Y, Hong L, Peng X, Baxa M, Partch C, Wang LP, Sosnick TR, et al. Temperature-Dependent Fold-Switching Mechanism of the Circadian Clock Protein KaiB. Biorxiv : the Preprint Server For Biology. PMID 38826295 DOI: 10.1101/2024.05.21.594594  0.737
2023 Faruk NF, Peng X, Sosnick TR. Factors That Control the Force Needed to Unfold a Membrane Protein in Silico Depend on the Mode of Denaturation. International Journal of Molecular Sciences. 24. PMID 36768981 DOI: 10.3390/ijms24032654  0.711
2022 Faruk NF, Peng X, Freed KF, Roux B, Sosnick TR. Challenges and Advantages of Accounting for Backbone Flexibility in Prediction of Protein-Protein Complexes. Journal of Chemical Theory and Computation. 18: 2016-2032. PMID 35213808 DOI: 10.1021/acs.jctc.1c01255  0.711
2022 Gaffney KA, Guo R, Bridges MD, Muhammednazaar S, Chen D, Kim M, Yang Z, Schilmiller AL, Faruk NF, Peng X, Jones AD, Kim KH, Sun L, Hubbell WL, Sosnick TR, et al. Lipid bilayer induces contraction of the denatured state ensemble of a helical-bundle membrane protein. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 34969836 DOI: 10.1073/pnas.2109169119  0.724
2021 Peng X, Baxa M, Faruk N, Sachleben JR, Pintscher S, Gagnon IA, Houliston S, Arrowsmith CH, Freed KF, Rocklin GJ, Sosnick TR. Prediction and Validation of a Protein's Free Energy Surface Using Hydrogen Exchange and (Importantly) Its Denaturant Dependence. Journal of Chemical Theory and Computation. PMID 34936354 DOI: 10.1021/acs.jctc.1c00960  0.638
2018 Peng X, Zhang Y, Li Y, Liu Q, Chu H, Zhang D, Li G. Integrating Multiple Accelerated Molecular Dynamics to Improve Accuracy of Free Energy Calculation. Journal of Chemical Theory and Computation. PMID 29394067 DOI: 10.1021/Acs.Jctc.7B01211  0.309
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