| Year |
Citation |
Score |
| 2023 |
Shibata K, Oda K, Nishizawa T, Hazama Y, Ono R, Takaramoto S, Bagherzadeh R, Yawo H, Nureki O, Inoue K, Akiyama H. Twisting and Protonation of Retinal Chromophore Regulate Channel Gating of Channelrhodopsin C1C2. Journal of the American Chemical Society. 145: 10779-10789. PMID 37129501 DOI: 10.1021/jacs.3c01879 |
0.425 |
|
| 2022 |
Futamata H, Fukuda M, Umeda R, Yamashita K, Tomita A, Takahashi S, Shikakura T, Hayashi S, Kusakizako T, Nishizawa T, Homma K, Nureki O. Author Correction: Cryo-EM structures of thermostabilized prestin provide mechanistic insights underlying outer hair cell electromotility. Nature Communications. 13: 7337. PMID 36443347 DOI: 10.1038/s41467-022-34985-0 |
0.425 |
|
| 2022 |
Futamata H, Fukuda M, Umeda R, Yamashita K, Tomita A, Takahashi S, Shikakura T, Hayashi S, Kusakizako T, Nishizawa T, Homma K, Nureki O. Cryo-EM structures of thermostabilized prestin provide mechanistic insights underlying outer hair cell electromotility. Nature Communications. 13: 6208. PMID 36266333 DOI: 10.1038/s41467-022-34017-x |
0.425 |
|
| 2022 |
Nakagawa R, Kannan S, Altae-Tran H, Takeda SN, Tomita A, Hirano H, Kusakizako T, Nishizawa T, Yamashita K, Zhang F, Nishimasu H, Nureki O. Structure and engineering of the minimal type VI CRISPR-Cas13bt3. Molecular Cell. 82: 3178-3192.e5. PMID 36027912 DOI: 10.1016/j.molcel.2022.08.001 |
0.442 |
|
| 2022 |
Kato T, Kusakizako T, Jin C, Zhou X, Ohgaki R, Quan L, Xu M, Okuda S, Kobayashi K, Yamashita K, Nishizawa T, Kanai Y, Nureki O. Structural insights into inhibitory mechanism of human excitatory amino acid transporter EAAT2. Nature Communications. 13: 4714. PMID 35953475 DOI: 10.1038/s41467-022-32442-6 |
0.425 |
|
| 2022 |
Kobayashi K, Kawakami K, Kusakizako T, Miyauchi H, Tomita A, Kobayashi K, Shihoya W, Yamashita K, Nishizawa T, Kato HE, Inoue A, Nureki O. Endogenous ligand recognition and structural transition of a human PTH receptor. Molecular Cell. PMID 35932760 DOI: 10.1016/j.molcel.2022.07.003 |
0.472 |
|
| 2022 |
Yamaguchi S, Naganuma M, Nishizawa T, Kusakizako T, Tomari Y, Nishimasu H, Nureki O. Structure of the Dicer-2-R2D2 heterodimer bound to a small RNA duplex. Nature. PMID 35768503 DOI: 10.1038/s41586-022-04790-2 |
0.461 |
|
| 2022 |
Hagino T, Kato T, Kasuya G, Kobayashi K, Kusakizako T, Hamamoto S, Sobajima T, Fujiwara Y, Yamashita K, Kawasaki H, Maturana AD, Nishizawa T, Nureki O. Cryo-EM structures of thylakoid-located voltage-dependent chloride channel VCCN1. Nature Communications. 13: 2505. PMID 35523970 DOI: 10.1038/s41467-022-30292-w |
0.425 |
|
| 2022 |
Kurihara N, Nakagawa R, Hirano H, Okazaki S, Tomita A, Kobayashi K, Kusakizako T, Nishizawa T, Yamashita K, Scott DA, Nishimasu H, Nureki O. Structure of the type V-C CRISPR-Cas effector enzyme. Molecular Cell. PMID 35366394 DOI: 10.1016/j.molcel.2022.03.006 |
0.47 |
|
| 2021 |
Tomita A, Daiho T, Kusakizako T, Yamashita K, Ogasawara S, Murata T, Nishizawa T, Nureki O. Cryo-EM reveals mechanistic insights into lipid-facilitated polyamine export by human ATP13A2. Molecular Cell. 81: 4799-4809.e5. PMID 34798056 DOI: 10.1016/j.molcel.2021.11.001 |
0.425 |
|
| 2021 |
Sato K, Kumar A, Hamada K, Okada C, Oguni A, Machiyama A, Sakuraba S, Nishizawa T, Nureki O, Kono H, Ogata K, Sengoku T. Structural basis of the regulation of the normal and oncogenic methylation of nucleosomal histone H3 Lys36 by NSD2. Nature Communications. 12: 6605. PMID 34782608 DOI: 10.1038/s41467-021-26913-5 |
0.425 |
|
| 2021 |
Kise Y, Kasuya G, Okamoto HH, Yamanouchi D, Kobayashi K, Kusakizako T, Nishizawa T, Nakajo K, Nureki O. Structural basis of gating modulation of Kv4 channel complexes. Nature. 599: 158-164. PMID 34552243 DOI: 10.1038/s41586-021-03935-z |
0.425 |
|
| 2021 |
Okamoto HH, Miyauchi H, Inoue A, Raimondi F, Tsujimoto H, Kusakizako T, Shihoya W, Yamashita K, Suno R, Nomura N, Kobayashi T, Iwata S, Nishizawa T, Nureki O. Cryo-EM structure of the human MT-G signaling complex. Nature Structural & Molecular Biology. PMID 34354246 DOI: 10.1038/s41594-021-00634-1 |
0.466 |
|
| 2021 |
Nagiri C, Kobayashi K, Tomita A, Kato M, Kobayashi K, Yamashita K, Nishizawa T, Inoue A, Shihoya W, Nureki O. Cryo-EM structure of the β3-adrenergic receptor reveals the molecular basis of subtype selectivity. Molecular Cell. PMID 34314699 DOI: 10.1016/j.molcel.2021.06.024 |
0.425 |
|
| 2021 |
Oda K, Nomura T, Nakane T, Yamashita K, Inoue K, Ito S, Vierock J, Hirata K, Maturana AD, Katayama K, Ikuta T, Ishigami I, Izume T, Umeda R, Eguma R, ... ... Nishizawa T, et al. Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin. Elife. 10. PMID 33752801 DOI: 10.7554/eLife.62389 |
0.475 |
|
| 2021 |
Takeda H, Tsutsumi A, Nishizawa T, Lindau C, Busto JV, Wenz LS, Ellenrieder L, Imai K, Straub SP, Mossmann W, Qiu J, Yamamori Y, Tomii K, Suzuki J, Murata T, et al. Mitochondrial sorting and assembly machinery operates by β-barrel switching. Nature. PMID 33408415 DOI: 10.1038/s41586-020-03113-7 |
0.453 |
|
| 2020 |
Takeda SN, Nakagawa R, Okazaki S, Hirano H, Kobayashi K, Kusakizako T, Nishizawa T, Yamashita K, Nishimasu H, Nureki O. Structure of the miniature type V-F CRISPR-Cas effector enzyme. Molecular Cell. PMID 33333018 DOI: 10.1016/j.molcel.2020.11.035 |
0.425 |
|
| 2020 |
Oda K, Lee Y, Wiriyasermkul P, Tanaka Y, Takemoto M, Yamashita K, Nagamori S, Nishizawa T, Nureki O. Consensus mutagenesis approach improves the thermal stability of system x transporter, xCT, and enables cryo-EM analyses. Protein Science : a Publication of the Protein Society. PMID 33016372 DOI: 10.1002/pro.3966 |
0.491 |
|
| 2020 |
Nakanishi H, Nishizawa T, Segawa K, Nureki O, Fujiyoshi Y, Nagata S, Abe K. Transport Cycle of Plasma Membrane Flippase ATP11C by Cryo-EM. Cell Reports. 32: 108208. PMID 32997992 DOI: 10.1016/j.celrep.2020.108208 |
0.498 |
|
| 2020 |
Demura K, Kusakizako T, Shihoya W, Hiraizumi M, Nomura K, Shimada H, Yamashita K, Nishizawa T, Taruno A, Nureki O. Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies. Science Advances. 6: eaba8105. PMID 32832629 DOI: 10.1126/Sciadv.Aba8105 |
0.495 |
|
| 2020 |
Shimada H, Kusakizako T, Dung Nguyen TH, Nishizawa T, Hino T, Tominaga M, Nureki O. The structure of lipid nanodisc-reconstituted TRPV3 reveals the gating mechanism. Nature Structural & Molecular Biology. 27: 645-652. PMID 32572254 DOI: 10.1038/s41594-020-0439-z |
0.425 |
|
| 2020 |
Nakamura R, Numata T, Kasuya G, Yokoyama T, Nishizawa T, Kusakizako T, Kato T, Hagino T, Dohmae N, Inoue M, Watanabe K, Ichijo H, Kikkawa M, Shirouzu M, Jentsch TJ, et al. Cryo-EM structure of the volume-regulated anion channel LRRC8D isoform identifies features important for substrate permeation. Communications Biology. 3: 240. PMID 32415200 DOI: 10.1038/s42003-020-0951-z |
0.513 |
|
| 2020 |
Umeda R, Satouh Y, Takemoto M, Nakada-Nakura Y, Liu K, Yokoyama T, Shirouzu M, Iwata S, Nomura N, Sato K, Ikawa M, Nishizawa T, Nureki O. Structural insights into tetraspanin CD9 function. Nature Communications. 11: 1606. PMID 32231207 DOI: 10.1038/S41467-020-15459-7 |
0.466 |
|
| 2020 |
Kobayashi K, Shihoya W, Nishizawa T, Kadji FMN, Aoki J, Inoue A, Nureki O. Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein. Nature Structural & Molecular Biology. 27: 274-280. PMID 32157248 DOI: 10.1038/s41594-020-0386-8 |
0.425 |
|
| 2019 |
Hiraizumi M, Yamashita K, Nishizawa T, Nureki O. Cryo-EM structures capture the transport cycle of the P4-ATPase flippase. Science (New York, N.Y.). PMID 31416931 DOI: 10.1126/science.aay3353 |
0.425 |
|
| 2019 |
Lee Y, Wiriyasermkul P, Jin C, Quan L, Ohgaki R, Okuda S, Kusakizako T, Nishizawa T, Oda K, Ishitani R, Yokoyama T, Nakane T, Shirouzu M, Endou H, Nagamori S, et al. Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc. Nature Structural & Molecular Biology. PMID 31160781 DOI: 10.1038/s41594-019-0237-7 |
0.467 |
|
| 2019 |
Umeda R, Nishizawa T, Nureki O. Crystallization of the human tetraspanin protein CD9. Acta Crystallographica. Section F, Structural Biology Communications. 75: 254-259. PMID 30950826 DOI: 10.1107/S2053230X1801840X |
0.425 |
|
| 2019 |
Kato T, Kumazaki K, Wada M, Taniguchi R, Nakane T, Yamashita K, Hirata K, Ishitani R, Ito K, Nishizawa T, Nureki O. Crystal structure of plant vacuolar iron transporter VIT1. Nature Plants. PMID 30742036 DOI: 10.1038/s41477-019-0367-2 |
0.466 |
|
| 2018 |
Shihoya W, Izume T, Inoue A, Yamashita K, Kadji FMN, Hirata K, Aoki J, Nishizawa T, Nureki O. Crystal structures of human ET receptor provide mechanistic insight into receptor activation and partial activation. Nature Communications. 9: 4711. PMID 30413709 DOI: 10.1038/s41467-018-07094-0 |
0.425 |
|
| 2018 |
Oda K, Vierock J, Oishi S, Rodriguez-Rozada S, Taniguchi R, Yamashita K, Wiegert JS, Nishizawa T, Hegemann P, Nureki O. Crystal structure of the red light-activated channelrhodopsin Chrimson. Nature Communications. 9: 3949. PMID 30258177 DOI: 10.1038/s41467-018-06421-9 |
0.472 |
|
| 2018 |
Kasuya G, Nakane T, Yokoyama T, Jia Y, Inoue M, Watanabe K, Nakamura R, Nishizawa T, Kusakizako T, Tsutsumi A, Yanagisawa H, Dohmae N, Hattori M, Ichijo H, Yan Z, et al. Cryo-EM structures of the human volume-regulated anion channel LRRC8. Nature Structural & Molecular Biology. PMID 30127360 DOI: 10.1038/s41594-018-0109-6 |
0.498 |
|
| 2017 |
Miyauchi H, Moriyama S, Kusakizako T, Kumazaki K, Nakane T, Yamashita K, Hirata K, Dohmae N, Nishizawa T, Ito K, Miyaji T, Moriyama Y, Ishitani R, Nureki O. Structural basis for xenobiotic extrusion by eukaryotic MATE transporter. Nature Communications. 8: 1633. PMID 29158478 DOI: 10.1038/s41467-017-01541-0 |
0.425 |
|
| 2017 |
Lee Y, Nishizawa T, Takemoto M, Kumazaki K, Yamashita K, Hirata K, Minoda A, Nagatoishi S, Tsumoto K, Ishitani R, Nureki O. Structure of the triose-phosphate/phosphate translocator reveals the basis of substrate specificity. Nature Plants. PMID 28970497 DOI: 10.1038/s41477-017-0022-8 |
0.425 |
|
| 2017 |
Shihoya W, Nishizawa T, Yamashita K, Inoue A, Hirata K, Kadji FMN, Okuta A, Tani K, Aoki J, Fujiyoshi Y, Doi T, Nureki O. X-ray structures of endothelin ETB receptor bound to clinical antagonist bosentan and its analog. Nature Structural & Molecular Biology. PMID 28805809 DOI: 10.1038/Nsmb.3450 |
0.484 |
|
| 2017 |
Taniguchi R, Inoue A, Sayama M, Uwamizu A, Yamashita K, Hirata K, Yoshida M, Tanaka Y, Kato HE, Nakada-Nakura Y, Otani Y, Nishizawa T, Doi T, Ohwada T, Ishitani R, et al. Structural insights into ligand recognition by the lysophosphatidic acid receptor LPA6. Nature. PMID 28792932 DOI: 10.1038/Nature23448 |
0.482 |
|
| 2016 |
Nango E, Royant A, Kubo M, Nakane T, Wickstrand C, Kimura T, Tanaka T, Tono K, Song C, Tanaka R, Arima T, Yamashita A, Kobayashi J, Hosaka T, Mizohata E, ... ... Nishizawa T, et al. A three-dimensional movie of structural changes in bacteriorhodopsin. Science (New York, N.Y.). 354: 1552-1557. PMID 28008064 DOI: 10.1126/Science.Aah3497 |
0.486 |
|
| 2016 |
Shihoya W, Nishizawa T, Okuta A, Tani K, Dohmae N, Fujiyoshi Y, Nureki O, Doi T. Activation mechanism of endothelin ETB receptor by endothelin-1. Nature. PMID 27595334 DOI: 10.1038/Nature19319 |
0.469 |
|
| 2016 |
Tsuchiya H, Doki S, Takemoto M, Ikuta T, Higuchi T, Fukui K, Usuda Y, Tabuchi E, Nagatoishi S, Tsumoto K, Nishizawa T, Ito K, Dohmae N, Ishitani R, Nureki O. Structural basis for amino acid export by DMT superfamily transporter YddG. Nature. PMID 27281193 DOI: 10.1038/nature17991 |
0.504 |
|
| 2015 |
Kato HE, Inoue K, Abe-Yoshizumi R, Kato Y, Ono H, Konno M, Hososhima S, Ishizuka T, Hoque MR, Kunitomo H, Ito J, Yoshizawa S, Yamashita K, Takemoto M, Nishizawa T, et al. Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump. Nature. 521: 48-53. PMID 25849775 DOI: 10.1038/Nature14322 |
0.482 |
|
| 2015 |
Lee Y, Nishizawa T, Yamashita K, Ishitani R, Nureki O. Structural basis for the facilitative diffusion mechanism by SemiSWEET transporter. Nature Communications. 6: 6112. PMID 25598322 DOI: 10.1038/ncomms7112 |
0.425 |
|
| 2014 |
Takeda H, Hattori M, Nishizawa T, Yamashita K, Shah ST, Caffrey M, Maturana AD, Ishitani R, Nureki O. Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg2+ channel MgtE. Nature Communications. 5: 5374. PMID 25367295 DOI: 10.1038/Ncomms6374 |
0.476 |
|
| 2014 |
Kumazaki K, Tsukazaki T, Nishizawa T, Tanaka Y, Kato HE, Nakada-Nakura Y, Hirata K, Mori Y, Suga H, Dohmae N, Ishitani R, Nureki O. Crystallization and preliminary X-ray diffraction analysis of YidC, a membrane-protein chaperone and insertase from Bacillus halodurans. Acta Crystallographica. Section F, Structural Biology Communications. 70: 1056-60. PMID 25084381 DOI: 10.1107/S2053230X14012540 |
0.465 |
|
| 2014 |
Suzuki H, Nishizawa T, Tani K, Yamazaki Y, Tamura A, Ishitani R, Dohmae N, Tsukita S, Nureki O, Fujiyoshi Y. Crystal structure of a claudin provides insight into the architecture of tight junctions. Science (New York, N.Y.). 344: 304-7. PMID 24744376 DOI: 10.1126/Science.1248571 |
0.491 |
|
| 2013 |
Nishizawa T, Kita S, Maturana AD, Furuya N, Hirata K, Kasuya G, Ogasawara S, Dohmae N, Iwamoto T, Ishitani R, Nureki O. Structural basis for the counter-transport mechanism of a H+/Ca2+ exchanger. Science (New York, N.Y.). 341: 168-72. PMID 23704374 DOI: 10.1126/science.1239002 |
0.465 |
|
| 2012 |
Nishimasu H, Ishizu H, Saito K, Fukuhara S, Kamatani MK, Bonnefond L, Matsumoto N, Nishizawa T, Nakanaga K, Aoki J, Ishitani R, Siomi H, Siomi MC, Nureki O. Structure and function of Zucchini endoribonuclease in piRNA biogenesis. Nature. 491: 284-7. PMID 23064230 DOI: 10.1038/nature11509 |
0.466 |
|
| 2012 |
Kato HE, Zhang F, Yizhar O, Ramakrishnan C, Nishizawa T, Hirata K, Ito J, Aita Y, Tsukazaki T, Hayashi S, Hegemann P, Maturana AD, Ishitani R, Deisseroth K, Nureki O. Crystal structure of the channelrhodopsin light-gated cation channel. Nature. 482: 369-74. PMID 22266941 DOI: 10.1038/Nature10870 |
0.501 |
|
| Show low-probability matches. |