Raymond K. Auerbach, Ph.D.
Affiliations: | Computational Biology and Bioinformatics | Yale University, New Haven, CT |
Area:
Computational Biology and BioinformaticsGoogle:
"Raymond Auerbach"Parents
Sign in to add mentor| Mark B. Gerstein | grad student | 2012 | Yale | |
| (Elucidating Transcriptional Regulation Using High-Throughput Sequencing, Data Integration, and Computational Models.) | ||||
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Publications
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| Gerstein MB, Rozowsky J, Yan KK, et al. (2014) Comparative analysis of the transcriptome across distant species. Nature. 512: 445-8 |
| Ehmer U, Zmoos AF, Auerbach RK, et al. (2014) Organ size control is dominant over Rb family inactivation to restrict proliferation in vivo. Cell Reports. 8: 371-81 |
| Auerbach RK, Chen B, Butte AJ. (2013) Relating genes to function: identifying enriched transcription factors using the ENCODE ChIP-Seq significance tool. Bioinformatics (Oxford, England). 29: 1922-4 |
| Lefrançois P, Auerbach RK, Yellman CM, et al. (2013) Centromere-like regions in the budding yeast genome. Plos Genetics. 9: e1003209 |
| Euskirchen G, Auerbach RK, Snyder M. (2012) SWI/SNF chromatin-remodeling factors: multiscale analyses and diverse functions. The Journal of Biological Chemistry. 287: 30897-905 |
| Li G, Ruan X, Auerbach RK, et al. (2012) Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation. Cell. 148: 84-98 |
| Sboner A, Mu XJ, Greenbaum D, et al. (2011) The real cost of sequencing: higher than you think! Genome Biology. 12: 125 |
| Euskirchen GM, Auerbach RK, Davidov E, et al. (2011) Diverse roles and interactions of the SWI/SNF chromatin remodeling complex revealed using global approaches. Plos Genetics. 7: e1002008 |
| Lu ZJ, Yip KY, Wang G, et al. (2011) Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data. Genome Research. 21: 276-85 |
| Lu ZJ, Yip KY, Wang G, et al. (2011) Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data (Genome Research (2011) 21, (276-285)) Genome Research. 21: 811 |