☰

Baris Ekim

Affiliations: 
Massachusetts Institute of Technology, Cambridge, MA, United States 
Google:
"Baris Ekim"
Tree Publications Similar researchers PubMed Report error

Parents

Sign in to add mentor
Bonnie Berger grad student MIT

Children

Sign in to add trainee

Collaborators

Sign in to add collaborator
BETA: Related publications

Publications

You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect.

Battistella E, Maheshwari A, Ekim B, et al. (2025) ralphi: a deep reinforcement learning framework for haplotype assembly. Biorxiv : the Preprint Server For Biology
Karami M, Soltani Mohammadi A, Martin M, et al. (2024) Designing efficient randstrobes for sequence similarity analyses. Bioinformatics (Oxford, England)
Pellow D, Pu L, Ekim B, et al. (2023) Efficient minimizer orders for large values of using minimum decycling sets. Genome Research
Ekim B, Sahlin K, Medvedev P, et al. (2023) Efficient mapping of accurate long reads in minimizer space with mapquik. Genome Research
Ekim B, Berger B, Chikhi R. (2021) Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer. Cell Systems
Ekim B, Berger B, Orenstein Y. (2020) A Randomized Parallel Algorithm for Efficiently Finding Near-Optimal Universal Hitting Sets. Research in Computational Molecular Biology : ... Annual International Conference, Recomb ... : Proceedings. Recomb (Conference : 2005- ). 12074: 37-53
See more...