| Year |
Citation |
Score |
| 2022 |
Wu J, Leontis NB, Zirbel CL, Bisaro DM, Ding B. Correction: A three-dimensional RNA motif mediates directional trafficking of Potato spindle tuber viroid from epidermal to palisade mesophyll cells in Nicotiana benthamiana. Plos Pathogens. 18: e1010421. PMID 35316309 DOI: 10.1371/journal.ppat.1010421 |
0.364 |
|
| 2021 |
Khisamutdinov EF, Sweeney BA, Leontis NB. Context-sensitivity of isosteric substitutions of non-Watson-Crick basepairs in recurrent RNA 3D motifs. Nucleic Acids Research. PMID 34403481 DOI: 10.1093/nar/gkab703 |
0.776 |
|
| 2021 |
Westhof E, Leontis NB. An RNA-centric historical narrative around the Protein Data Bank. The Journal of Biological Chemistry. 100555. PMID 33744291 DOI: 10.1016/j.jbc.2021.100555 |
0.53 |
|
| 2020 |
Wu J, Zhou C, Li J, Li C, Tao X, Leontis NB, Zirbel CL, Bisaro DM, Ding B. Functional analysis reveals G/U pairs critical for replication and trafficking of an infectious non-coding viroid RNA. Nucleic Acids Research. PMID 33313761 DOI: 10.1093/nar/gkaa1211 |
0.407 |
|
| 2020 |
Wu J, Zhou C, Li J, Li C, Tao X, Leontis NB, Zirbel CL, Bisaro DM, Ding B. Functional analysis reveals G/U pairs critical for replication and trafficking of an infectious non-coding viroid RNA. Nucleic Acids Research. PMID 32083649 DOI: 10.1093/Nar/Gkaa100 |
0.542 |
|
| 2019 |
Wu J, Leontis NB, Zirbel CL, Bisaro DM, Ding B. A three-dimensional RNA motif mediates directional trafficking of Potato spindle tuber viroid from epidermal to palisade mesophyll cells in Nicotiana benthamiana. Plos Pathogens. 15: e1008147. PMID 31644572 DOI: 10.1371/Journal.Ppat.1008147 |
0.592 |
|
| 2018 |
Hosseini M, Roy P, Sissler M, Zirbel CL, Westhof E, Leontis N. How to fold and protect mitochondrial ribosomal RNA with fewer guanines. Nucleic Acids Research. PMID 30215760 DOI: 10.1093/Nar/Gky762 |
0.599 |
|
| 2018 |
Takeda R, Zirbel CL, Leontis NB, Wang Y, Ding B. Allelic RNA Motifs in Regulating Systemic Trafficking of Potato Spindle Tuber Viroid. Viruses. 10. PMID 29601476 DOI: 10.3390/V10040160 |
0.61 |
|
| 2018 |
Wang Y, Zirbel CL, Leontis NB, Ding B. RNA 3-dimensional structural motifs as a critical constraint of viroid RNA evolution. Plos Pathogens. 14: e1006801. PMID 29470541 DOI: 10.1371/Journal.Ppat.1006801 |
0.603 |
|
| 2016 |
Roll J, Zirbel CL, Sweeney B, Petrov AI, Leontis N. JAR3D Webserver: Scoring and aligning RNA loop sequences to known 3D motifs. Nucleic Acids Research. PMID 27235417 DOI: 10.1093/Nar/Gkw453 |
0.608 |
|
| 2016 |
Parlea L, Sweeney BA, Zirbel CL, Leontis NB. The RNA 3D Motif Atlas: Computational Methods for Extraction, Organization and Evaluation of RNA Motifs. Methods (San Diego, Calif.). PMID 27125735 DOI: 10.1016/J.Ymeth.2016.04.025 |
0.635 |
|
| 2015 |
Zirbel CL, Roll J, Sweeney BA, Petrov AI, Pirrung M, Leontis NB. Identifying novel sequence variants of RNA 3D motifs. Nucleic Acids Research. 43: 7504-20. PMID 26130723 DOI: 10.1093/Nar/Gkv651 |
0.587 |
|
| 2015 |
Cannone JJ, Sweeney BA, Petrov AI, Gutell RR, Zirbel CL, Leontis N. R3D-2-MSA: the RNA 3D structure-to-multiple sequence alignment server. Nucleic Acids Research. 43: W15-23. PMID 26048960 DOI: 10.1093/Nar/Gkv543 |
0.565 |
|
| 2015 |
Sweeney BA, Roy P, Leontis NB. An introduction to recurrent nucleotide interactions in RNA. Wiley Interdisciplinary Reviews. Rna. 6: 17-45. PMID 25664365 DOI: 10.1002/Wrna.1258 |
0.661 |
|
| 2015 |
Khisamutdinov EF, Shamaev AE, Karabaeva KE, Mereshchenko AS, Panov MS, Rabahalsulami, Boda PA, Leontis NB, Tarnovsky AN, Wilson RM. A pyrene dihydrodioxin with pyridinium "arms": A photochemically active DNA cleaving agent with unusual duplex stabilizing and electron trapping properties Journal of Photochemistry and Photobiology a: Chemistry. 307: 131-146. DOI: 10.1016/J.Jphotochem.2015.03.017 |
0.663 |
|
| 2014 |
Leontis NB, Westhof E. Chemistry. Self-assembled RNA nanostructures. Science (New York, N.Y.). 345: 732-3. PMID 25124412 DOI: 10.1126/Science.1257989 |
0.439 |
|
| 2014 |
Coimbatore Narayanan B, Westbrook J, Ghosh S, Petrov AI, Sweeney B, Zirbel CL, Leontis NB, Berman HM. The Nucleic Acid Database: new features and capabilities. Nucleic Acids Research. 42: D114-22. PMID 24185695 DOI: 10.1093/Nar/Gkt980 |
0.394 |
|
| 2013 |
Havrila M, Réblová K, Zirbel CL, Leontis NB, Šponer J. Isosteric and nonisosteric base pairs in RNA motifs: molecular dynamics and bioinformatics study of the sarcin-ricin internal loop. The Journal of Physical Chemistry. B. 117: 14302-19. PMID 24144333 DOI: 10.1021/Jp408530W |
0.608 |
|
| 2013 |
Qiu M, Khisamutdinov E, Zhao Z, Pan C, Choi JW, Leontis NB, Guo P. RNA nanotechnology for computer design and in vivo computation. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 371: 20120310. PMID 24000362 DOI: 10.1098/Rsta.2012.0310 |
0.782 |
|
| 2013 |
Petrov AI, Zirbel CL, Leontis NB. Automated classification of RNA 3D motifs and the RNA 3D Motif Atlas. Rna (New York, N.Y.). 19: 1327-40. PMID 23970545 DOI: 10.1261/Rna.039438.113 |
0.654 |
|
| 2013 |
Leontis N, Sweeney B, Haque F, Guo P. Conference Scene: Advances in RNA nanotechnology promise to transform medicine. Nanomedicine (London, England). 8: 1051-4. PMID 23837854 DOI: 10.2217/Nnm.13.105 |
0.549 |
|
| 2013 |
Rahrig RR, Petrov AI, Leontis NB, Zirbel CL. R3D Align web server for global nucleotide to nucleotide alignments of RNA 3D structures. Nucleic Acids Research. 41: W15-21. PMID 23716643 DOI: 10.1093/Nar/Gkt417 |
0.615 |
|
| 2013 |
Petrov AI, Sweeney BA, Leontis NB. Analyzing, searching, and annotating recurrent RNA three-dimensional motifs Rna Structure and Folding: Biophysical Techniques and Prediction Methods. 363-398. DOI: 10.1515/9783110284959.363 |
0.471 |
|
| 2012 |
Cruz JA, Blanchet MF, Boniecki M, Bujnicki JM, Chen SJ, Cao S, Das R, Ding F, Dokholyan NV, Flores SC, Huang L, Lavender CA, Lisi V, Major F, Mikolajczak K, ... ... Leontis NB, et al. RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction. Rna (New York, N.Y.). 18: 610-25. PMID 22361291 DOI: 10.1261/Rna.031054.111 |
0.579 |
|
| 2012 |
Abu Almakarem AS, Petrov AI, Stombaugh J, Zirbel CL, Leontis NB. Comprehensive survey and geometric classification of base triples in RNA structures. Nucleic Acids Research. 40: 1407-23. PMID 22053086 DOI: 10.1093/Nar/Gkr810 |
0.718 |
|
| 2011 |
Zgarbová M, Jurečka P, Banáš P, Otyepka M, Sponer JE, Leontis NB, Zirbel CL, Sponer J. Noncanonical hydrogen bonding in nucleic acids. Benchmark evaluation of key base-phosphate interactions in folded RNA molecules using quantum-chemical calculations and molecular dynamics simulations. The Journal of Physical Chemistry. A. 115: 11277-92. PMID 21910417 DOI: 10.1021/Jp204820B |
0.518 |
|
| 2011 |
Birmingham A, Clemente JC, Desai N, Gilbert J, Gonzalez A, Kyrpides N, Meyer F, Nawrocki E, Sterk P, Stombaugh J, Weinberg Z, Wendel D, Leontis NB, Zirbel C, Knight R, et al. Meeting report of the RNA Ontology Consortium January 8-9, 2011. Standards in Genomic Sciences. 4: 252-6. PMID 21677862 DOI: 10.4056/Sigs.1724282 |
0.54 |
|
| 2011 |
Rocca-Serra P, Bellaousov S, Birmingham A, Chen C, Cordero P, Das R, Davis-Neulander L, Duncan CD, Halvorsen M, Knight R, Leontis NB, Mathews DH, Ritz J, Stombaugh J, Weeks KM, et al. Sharing and archiving nucleic acid structure mapping data. Rna (New York, N.Y.). 17: 1204-12. PMID 21610212 DOI: 10.1261/Rna.2753211 |
0.344 |
|
| 2011 |
Petrov AI, Zirbel CL, Leontis NB. WebFR3D--a server for finding, aligning and analyzing recurrent RNA 3D motifs. Nucleic Acids Research. 39: W50-5. PMID 21515634 DOI: 10.1093/Nar/Gkr249 |
0.573 |
|
| 2011 |
Takeda R, Petrov AI, Leontis NB, Ding B. A three-dimensional RNA motif in Potato spindle tuber viroid mediates trafficking from palisade mesophyll to spongy mesophyll in Nicotiana benthamiana. The Plant Cell. 23: 258-72. PMID 21258006 DOI: 10.1105/Tpc.110.081414 |
0.641 |
|
| 2011 |
Novikova IV, Hassan BH, Mirzoyan MG, Leontis NB. Engineering cooperative tecto-RNA complexes having programmable stoichiometries. Nucleic Acids Research. 39: 2903-17. PMID 21138969 DOI: 10.1093/Nar/Gkq1231 |
0.576 |
|
| 2011 |
Hoehndorf R, Batchelor C, Bittner T, Dumontier M, Eilbeck K, Knight R, Mungall CJ, Richardson JS, Stombaugh J, Westhof E, Zirbel CL, Leontis NB. The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data Applied Ontology. 6: 53-89. DOI: 10.1038/Npre.2009.3561.1 |
0.61 |
|
| 2010 |
Å poner J, Å poner JE, Petrov AI, Leontis NB. Quantum chemical studies of nucleic acids: can we construct a bridge to the RNA structural biology and bioinformatics communities? The Journal of Physical Chemistry. B. 114: 15723-41. PMID 21049899 DOI: 10.1021/Jp104361M |
0.509 |
|
| 2010 |
Rahrig RR, Leontis NB, Zirbel CL. R3D Align: global pairwise alignment of RNA 3D structures using local superpositions. Bioinformatics (Oxford, England). 26: 2689-97. PMID 20929913 DOI: 10.1093/Bioinformatics/Btq506 |
0.6 |
|
| 2010 |
Besseová I, Réblová K, Leontis NB, Sponer J. Molecular dynamics simulations suggest that RNA three-way junctions can act as flexible RNA structural elements in the ribosome. Nucleic Acids Research. 38: 6247-64. PMID 20507916 DOI: 10.1093/Nar/Gkq414 |
0.419 |
|
| 2009 |
Brown JW, Birmingham A, Griffiths PE, Jossinet F, Kachouri-Lafond R, Knight R, Lang BF, Leontis N, Steger G, Stombaugh J, Westhof E. The RNA structure alignment ontology. Rna (New York, N.Y.). 15: 1623-31. PMID 19622678 DOI: 10.1261/rna.1601409 |
0.488 |
|
| 2009 |
Zirbel CL, Sponer JE, Sponer J, Stombaugh J, Leontis NB. Classification and energetics of the base-phosphate interactions in RNA. Nucleic Acids Research. 37: 4898-918. PMID 19528080 DOI: 10.1093/Nar/Gkp468 |
0.605 |
|
| 2009 |
Stombaugh J, Zirbel CL, Westhof E, Leontis NB. Frequency and isostericity of RNA base pairs. Nucleic Acids Research. 37: 2294-312. PMID 19240142 DOI: 10.1093/Nar/Gkp011 |
0.612 |
|
| 2009 |
Petrov AI, Stombaugh J, Zirbel CL, Leontis NB. Understanding sequence variability of RNA motifs using geometric search and IsoDiscrepancy matrices Occbio'09: 2009 Ohio Collaborative Conference On Bioinformatics. 45-50. DOI: 10.1109/OCCBIO.2009.15 |
0.463 |
|
| 2008 |
Xin Y, Laing C, Leontis NB, Schlick T. Annotation of tertiary interactions in RNA structures reveals variations and correlations. Rna (New York, N.Y.). 14: 2465-77. PMID 18957492 DOI: 10.1261/Rna.1249208 |
0.634 |
|
| 2008 |
Afonin KA, Danilov EO, Novikova IV, Leontis NB. TokenRNA: a new type of sequence-specific, label-free fluorescent biosensor for folded RNA molecules. Chembiochem : a European Journal of Chemical Biology. 9: 1902-5. PMID 18655086 DOI: 10.1002/Cbic.200800183 |
0.454 |
|
| 2008 |
Afonin KA, Cieply DJ, Leontis NB. Specific RNA self-assembly with minimal paranemic motifs. Journal of the American Chemical Society. 130: 93-102. PMID 18072767 DOI: 10.1021/Ja071516M |
0.461 |
|
| 2008 |
Sarver M, Zirbel CL, Stombaugh J, Mokdad A, Leontis NB. FR3D: Finding local and composite recurrent structural motifs in RNA 3D structures Journal of Mathematical Biology. 56: 215-252. PMID 17694311 DOI: 10.1007/S00285-007-0110-X |
0.782 |
|
| 2007 |
Zhong X, Tao X, Stombaugh J, Leontis N, Ding B. Tertiary structure and function of an RNA motif required for plant vascular entry to initiate systemic trafficking. The Embo Journal. 26: 3836-46. PMID 17660743 DOI: 10.1038/Sj.Emboj.7601812 |
0.605 |
|
| 2006 |
Afonin KA, Leontis NB. Generating new specific RNA interaction interfaces using C-loops. Journal of the American Chemical Society. 128: 16131-7. PMID 17165766 DOI: 10.1021/Ja064289H |
0.497 |
|
| 2006 |
Zhong X, Leontis N, Qian S, Itaya A, Qi Y, Boris-Lawrie K, Ding B. Tertiary structural and functional analyses of a viroid RNA motif by isostericity matrix and mutagenesis reveal its essential role in replication. Journal of Virology. 80: 8566-81. PMID 16912306 DOI: 10.1128/Jvi.00837-06 |
0.596 |
|
| 2006 |
Mokdad A, Leontis NB. Ribostral: an RNA 3D alignment analyzer and viewer based on basepair isostericities. Bioinformatics (Oxford, England). 22: 2168-70. PMID 16820430 DOI: 10.1093/Bioinformatics/Btl360 |
0.757 |
|
| 2006 |
Leontis NB, Lescoute A, Westhof E. The building blocks and motifs of RNA architecture. Current Opinion in Structural Biology. 16: 279-87. PMID 16713707 DOI: 10.1016/J.Sbi.2006.05.009 |
0.645 |
|
| 2006 |
Nasalean L, Baudrey S, Leontis NB, Jaeger L. Controlling RNA self-assembly to form filaments. Nucleic Acids Research. 34: 1381-92. PMID 16522648 DOI: 10.1093/Nar/Gkl008 |
0.535 |
|
| 2006 |
Mokdad A, Krasovska MV, Sponer J, Leontis NB. Structural and evolutionary classification of G/U wobble basepairs in the ribosome. Nucleic Acids Research. 34: 1326-41. PMID 16522645 DOI: 10.1093/Nar/Gkl025 |
0.664 |
|
| 2006 |
Leontis NB, Altman RB, Berman HM, Brenner SE, Brown JW, Engelke DR, Harvey SC, Holbrook SR, Jossinet F, Lewis SE, Major F, Mathews DH, Richardson JS, Williamson JR, Westhof E. The RNA Ontology Consortium: an open invitation to the RNA community. Rna (New York, N.Y.). 12: 533-41. PMID 16484377 DOI: 10.1261/Rna.2343206 |
0.763 |
|
| 2005 |
Lescoute A, Leontis NB, Massire C, Westhof E. Recurrent structural RNA motifs, Isostericity Matrices and sequence alignments. Nucleic Acids Research. 33: 2395-409. PMID 15860776 DOI: 10.1093/Nar/Gki535 |
0.487 |
|
| 2005 |
Rázga F, Koca J, Sponer J, Leontis NB. Hinge-like motions in RNA kink-turns: the role of the second a-minor motif and nominally unpaired bases. Biophysical Journal. 88: 3466-85. PMID 15722438 DOI: 10.1529/Biophysj.104.054916 |
0.389 |
|
| 2004 |
Réblová K, Spacková N, Koca J, Leontis NB, Sponer J. Long-residency hydration, cation binding, and dynamics of loop E/helix IV rRNA-L25 protein complex. Biophysical Journal. 87: 3397-412. PMID 15339800 DOI: 10.1529/Biophysj.104.047126 |
0.425 |
|
| 2004 |
Rázga F, Spackova N, Réblova K, Koca J, Leontis NB, Sponer J. Ribosomal RNA kink-turn motif--a flexible molecular hinge. Journal of Biomolecular Structure & Dynamics. 22: 183-94. PMID 15317479 DOI: 10.1080/07391102.2004.10506994 |
0.392 |
|
| 2003 |
Sponer J, Mokdad A, Sponer JE, Spacková N, Leszczynski J, Leontis NB. Unique tertiary and neighbor interactions determine conservation patterns of Cis Watson-Crick A/G base-pairs. Journal of Molecular Biology. 330: 967-78. PMID 12860120 DOI: 10.1016/S0022-2836(03)00667-3 |
0.657 |
|
| 2003 |
Leontis NB, Westhof E. Analysis of RNA motifs. Current Opinion in Structural Biology. 13: 300-8. PMID 12831880 DOI: 10.1016/S0959-440X(03)00076-9 |
0.649 |
|
| 2003 |
Yang H, Jossinet F, Leontis N, Chen L, Westbrook J, Berman H, Westhof E. Tools for the automatic identification and classification of RNA base pairs. Nucleic Acids Research. 31: 3450-60. PMID 12824344 DOI: 10.1093/Nar/Gkg529 |
0.602 |
|
| 2003 |
Réblová K, Spacková N, Stefl R, Csaszar K, Koca J, Leontis NB, Sponer J. Non-Watson-Crick basepairing and hydration in RNA motifs: molecular dynamics of 5S rRNA loop E. Biophysical Journal. 84: 3564-82. PMID 12770867 DOI: 10.1016/S0006-3495(03)75089-9 |
0.43 |
|
| 2002 |
Leontis NB, Westhof E. The annotation of RNA motifs. Comparative and Functional Genomics. 3: 518-24. PMID 18629252 DOI: 10.1002/Cfg.213 |
0.67 |
|
| 2002 |
Leontis NB, Stombaugh J, Westhof E. Motif prediction in ribosomal RNAs: Lessons and prospects for automated motif prediction in homologous RNA molecules Biochimie. 84: 961-973. PMID 12458088 DOI: 10.1016/S0300-9084(02)01463-3 |
0.647 |
|
| 2002 |
Leontis NB, Stombaugh J, Westhof E. The non-Watson-Crick base pairs and their associated isostericity matrices. Nucleic Acids Research. 30: 3497-531. PMID 12177293 DOI: 10.1093/Nar/Gkf481 |
0.626 |
|
| 2002 |
Waugh A, Gendron P, Altman R, Brown JW, Case D, Gautheret D, Harvey SC, Leontis N, Westbrook J, Westhof E, Zuker M, Major F. RNAML: a standard syntax for exchanging RNA information. Rna (New York, N.Y.). 8: 707-17. PMID 12088144 DOI: 10.1017/S1355838202028017 |
0.567 |
|
| 2002 |
Myshkin E, Leontis NB, Bullerjahn GS. Computational simulation of the docking of Prochlorothrix hollandica plastocyanin to potosystem I: modeling the electron transfer complex. Biophysical Journal. 82: 3305-13. PMID 12023253 DOI: 10.1016/S0006-3495(02)75671-3 |
0.313 |
|
| 2001 |
Csaszar K, Špačková N, Štefl R, Šponer J, Leontis NB. Molecular dynamics of the frame-shifting pseudoknot from beet western yellows virus: The role of non-Watson-Crick base-pairing, ordered hydration, cation binding and base mutations on stability and unfolding Journal of Molecular Biology. 313: 1073-1091. PMID 11700064 DOI: 10.1006/Jmbi.2001.5100 |
0.36 |
|
| 2001 |
Leontis NB, Westhof E. Geometric nomenclature and classification of RNA base pairs Rna. 7: 499-512. PMID 11345429 DOI: 10.1017/S1355838201002515 |
0.622 |
|
| 2001 |
Jaeger L, Westhof E, Leontis NB. TectoRNA: Modular assembly units for the construction of RNA nano-objects Nucleic Acids Research. 29: 455-463. PMID 11139616 DOI: 10.1093/Nar/29.2.455 |
0.559 |
|
| 2000 |
Thiviyanathan V, Guliaev AB, Leontis NB, Gorenstein DG. Solution conformation of a bulged adenosine base in an RNA duplex by relaxation matrix refinement Journal of Molecular Biology. 300: 1143-1154. PMID 10903860 DOI: 10.1006/Jmbi.2000.3931 |
0.62 |
|
| 2000 |
Thiviyanathan V, Luxon B, Leontis N, Donne D, Gorenstein D. Nmr Structure Of A Dna Three-Way Junction Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb1Ekw/Pdb |
0.332 |
|
| 2000 |
Jaeger L, Leontis NB. Tecto-RNA: One-dimensional self-assembly through tertiary interactions Angewandte Chemie - International Edition. 39: 2521-2524. DOI: 10.1002/1521-3773(20000717)39:14<2521::Aid-Anie2521>3.0.Co;2-P |
0.569 |
|
| 2000 |
Jaeger L, Leontis N. Tekto-RNA: eindimensionale Selbstanordnung durch tertiäre Wechselwirkungen Angewandte Chemie. 112: 2576-2580. DOI: 10.1002/1521-3757(20000717)112:14<2576::Aid-Ange2576>3.0.Co;2-G |
0.584 |
|
| 1999 |
Guliaev AB, Leontis NB. Cationic 5,10,15,20-tetrakis (N-methylpyridinium-4-yl) porphyrin fully intercalates at 5'-CG-3' steps of duplex DNA in solution Biochemistry. 38: 15425-15437. PMID 10569925 DOI: 10.1021/Bi9913808 |
0.345 |
|
| 1999 |
Thiviyanathan V, Luxon BA, Leontis NB, Illangasekare N, Donne DG, Gorenstein DG. Hybrid-hybrid matrix structural refinement of a DNA three-way junction from 3D NOESY-NOESY Journal of Biomolecular Nmr. 14: 209-221. PMID 10481274 DOI: 10.1023/A:1008330011425 |
0.382 |
|
| 1998 |
Leontis NB, Westhof E. Conserved geometrical base-pairing patterns in RNA Quarterly Reviews of Biophysics. 31: 399-455. PMID 10709244 DOI: 10.1017/S0033583599003479 |
0.579 |
|
| 1998 |
Leontis NB, Westhof E. A common motif organizes the structure of multi-helix loops in 16 S and 23 S ribosomal RNAs Journal of Molecular Biology. 283: 571-583. PMID 9784367 DOI: 10.1006/Jmbi.1998.2106 |
0.529 |
|
| 1998 |
Leontis NB, Westhof E. The 5S rRNA loop E: Chemical probing and phylogenetic data versus crystal structure Rna. 4: 1134-1153. PMID 9740131 DOI: 10.1017/S1355838298980566 |
0.612 |
|
| 1998 |
Woodson SA, Leontis NB. Structure and dynamics of ribosomal RNA. Current Opinion in Structural Biology. 8: 294-300. PMID 9666324 DOI: 10.1016/S0959-440X(98)80061-4 |
0.599 |
|
| 1995 |
Leontis NB, Piotto ME, Hills MT, Malhotra A, Ouporov IV, Nussbaum JM, Gorenstein DG. Structural studies of DNA three-way junctions. Methods in Enzymology. 261: 183-207. PMID 8569495 DOI: 10.1016/S0076-6879(95)61010-3 |
0.478 |
|
| 1995 |
Ouporov IV, Leontis NB. Refinement of the solution structure of a branched DNA three-way junction Biophysical Journal. 68: 266-274. PMID 7711250 DOI: 10.1016/S0006-3495(95)80183-9 |
0.353 |
|
| 1995 |
Leontis NB, Hills MT, Piotto M, Ouporov IV, Malhotra A, Gorenstein DG. Helical stacking in DNA three-way junctions containing two unpaired pyrimidines: proton NMR studies. Biophysical Journal. 68: 251-65. PMID 7711249 DOI: 10.1016/S0006-3495(95)80182-7 |
0.383 |
|
| 1995 |
Kadrmas JL, Ravin AJ, Leontis NB. Relative stabilities of DNA three-way, four-way and five-way junctions (multi-helix junction loops): Unpaired nucleotides can be stabilizing or destabilizing Nucleic Acids Research. 23: 2212-2222. PMID 7610050 DOI: 10.1093/Nar/23.12.2212 |
0.397 |
|
| 1994 |
Ladbury JE, Sturtevant JM, Leontis NB. The thermodynamics of formation of a three-strand, DNA three-way junction complex. Biochemistry. 33: 6828-33. PMID 8204617 DOI: 10.1021/Bi00188A011 |
0.32 |
|
| 1994 |
Zhong M, Rashes MS, Leontis NB, Kallenbach NR. Effects of unpaired bases on the conformation and stability of three-arm DNA junctions. Biochemistry. 33: 3660-7. PMID 8142364 DOI: 10.1021/Bi00178A024 |
0.399 |
|
| 1994 |
Nussbaum JM, Newport ME, Mackie M, Leontis NB. Structure-specific binding and photosensitized cleavage of branched DNA three-way junction complexes by cationic porphyrins. Photochemistry and Photobiology. 59: 515-28. PMID 8041806 DOI: 10.1111/J.1751-1097.1994.Tb02977.X |
0.321 |
|
| 1993 |
Leontis NB, Hills MT, Piotto M, Malhotra A, Nussbaum J, Gorenstein DG. A model for the solution structure of a branched, three-strand DNA complex. Journal of Biomolecular Structure & Dynamics. 11: 215-23. PMID 8286052 DOI: 10.1080/07391102.1993.10508722 |
0.389 |
|
| 1991 |
Leontis NB, Kwok W, Newman JS. Stability and structure of three-way DNA junctions containing unpaired nucleotides Nucleic Acids Research. 19: 759-766. PMID 2017361 DOI: 10.1093/Nar/19.4.759 |
0.417 |
|
| 1988 |
Leontis N, DaLio A, Strobel M, Engelke D. Effects of tRNA-intron structure on cleavage of precursor tRNAs by RNase P from Saccharomyces cerevisiae. Nucleic Acids Research. 16: 2537-52. PMID 3283703 DOI: 10.1093/Nar/16.6.2537 |
0.599 |
|
| 1988 |
Moore PB, Abo S, Freeborn B, Gewirth DT, Leontis NB, Sun G. [10] Preparation of 5S RNA-related materials for nuclear magnetic resonance and crystallography studies Methods in Enzymology. 164: 158-174. PMID 3071660 DOI: 10.1016/S0076-6879(88)64041-9 |
0.64 |
|
| 1987 |
Gewirth DT, Abo SR, Leontis NB, Moore PB. Secondary structure of 5S RNA: NMR experiments on RNA molecules partially labeled with nitrogen-15 Biochemistry. 26: 5213-5220. PMID 2444255 DOI: 10.1021/Bi00390A047 |
0.694 |
|
| 1986 |
Leontis NB, Ghosh P, Moore PB. Effect of magnesium ion on the structure of the 5S RNA from Escherichia coli. An imino proton magnetic resonance study of the helix I, IV, and v regions of the molecule Biochemistry. 25: 7386-7392. PMID 3542026 DOI: 10.1021/Bi00371A021 |
0.652 |
|
| 1986 |
Leontis NB, Moore PB. Imino proton exchange in the 5S RNA of Escherichia coli and its complex with protein L25 at 490 MHz Biochemistry. 25: 5736-5744. PMID 3535886 DOI: 10.1021/Bi00367A058 |
0.631 |
|
| 1986 |
Leontis NB, Moore PB. NMR evidence for dynamic secondary structure in helices II and III of the 5S RNA of Escherichia coli Biochemistry. 25: 3916-3925. PMID 2427108 DOI: 10.1021/Bi00361A027 |
0.695 |
|
| 1984 |
Leontis NB, Moore PB. A small angle x-ray scattering study of a fragment derived from E. coli 5S RNA Nucleic Acids Research. 12: 2193-2203. PMID 6366745 DOI: 10.1093/Nar/12.4.2193 |
0.628 |
|
| 1983 |
Moore PB, Kime MJ, Leontis NB, Abdel-Meguid SS. Physical studies on a nucleoprotein from the ribosome of e. Coli Journal of Biomolecular Structure and Dynamics. 1: 383-393. PMID 6401116 DOI: 10.1080/07391102.1983.10507449 |
0.652 |
|
| Show low-probability matches. |
