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Yuannian Jiao, Ph.D. - Publications

Affiliations: 
2011 Pennsylvania State University, State College, PA, United States 
Area:
Botany Biology, Evolution and Development Biology
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Barker MS, Jiao Y, Glennon KL. Doubling down on polyploid discoveries: Global advances in genomics and ecological impacts of polyploidy. American Journal of Botany. 111: e16395. PMID 39164922 DOI: 10.1002/ajb2.16395  0.335
2023 Jia J, Zhao G, Li D, Wang K, Kong C, Deng P, Yan X, Zhang X, Lu Z, Xu S, Jiao Y, Chong K, Liu X, Cui D, Li G, et al. Genome resources for the elite bread wheat cultivar Aikang 58 and mining of elite homeologous haplotypes for accelerating wheat improvement. Molecular Plant. PMID 37897037 DOI: 10.1016/j.molp.2023.10.015  0.446
2023 Shen F, Qin Y, Wang R, Huang X, Wang Y, Gao T, He J, Zhou Y, Jiao Y, Wei J, Li L, Yang X. Comparative genomics reveals a unique nitrogen-carbon balance system in Asteraceae. Nature Communications. 14: 4334. PMID 37474573 DOI: 10.1038/s41467-023-40002-9  0.376
2023 Guo X, Hu X, Li J, Shao B, Wang Y, Wang L, Li K, Lin D, Wang H, Gao Z, Jiao Y, Wen Y, Ji H, Ma C, Ge S, et al. The Sapria himalayana genome provides new insights into the lifestyle of endoparasitic plants. Bmc Biology. 21: 134. PMID 37280593 DOI: 10.1186/s12915-023-01620-3  0.413
2023 Chen Y, Guo Y, Xie X, Wang Z, Miao L, Yang Z, Jiao Y, Xie C, Liu J, Hu Z, Xin M, Yao Y, Ni Z, Sun Q, Peng H, et al. Pangenome-based trajectories of intracellular gene transfers in Poaceae unveil high cumulation in Triticeae. Plant Physiology. PMID 37249052 DOI: 10.1093/plphys/kiad319  0.493
2023 Yu R, Chen X, Long L, Jost M, Zhao R, Liu L, Mower JP, dePamphilis CW, Wanke S, Jiao Y. De novo assembly and comparative analyses of mitochondrial genomes in Piperales. Genome Biology and Evolution. PMID 36896589 DOI: 10.1093/gbe/evad041  0.598
2023 Chen H, Guo M, Dong S, Wu X, Zhang G, He L, Jiao Y, Chen S, Li L, Luo H. A chromosome-scale genome assembly of Artemisia argyi reveals unbiased subgenome evolution and key contributions of gene duplication to volatile terpenoid diversity. Plant Communications. 100516. PMID 36597358 DOI: 10.1016/j.xplc.2023.100516  0.46
2022 Xiao J, Liu B, Yao Y, Guo Z, Jia H, Kong L, Zhang A, Ma W, Ni Z, Xu S, Lu F, Jiao Y, Yang W, Lin X, Sun S, et al. Wheat genomic study for genetic improvement of traits in China. Science China. Life Sciences. PMID 36018491 DOI: 10.1007/s11427-022-2178-7  0.384
2022 Shu JP, Wang H, Shen H, Wang RJ, Fu Q, Wang YD, Jiao YN, Yan YH. Phylogenomic Analysis Reconstructed the Order Matoniales from Paleopolyploidy Veil. Plants (Basel, Switzerland). 11. PMID 35736680 DOI: 10.3390/plants11121529  0.397
2022 Shen Y, Li W, Zeng Y, Li Z, Chen Y, Zhang J, Zhao H, Feng L, Ma D, Mo X, Ouyang P, Huang L, Wang Z, Jiao Y, Wang HB. Chromosome-level and haplotype-resolved genome provides insight into the tetraploid hybrid origin of patchouli. Nature Communications. 13: 3511. PMID 35717499 DOI: 10.1038/s41467-022-31121-w  0.432
2022 Wang QH, Zhang J, Liu Y, Jia Y, Jiao YN, Xu B, Chen ZD. Diversity, phylogeny and adaptation of bryophytes: insights from genomic and transcriptomic data. Journal of Experimental Botany. PMID 35437589 DOI: 10.1093/jxb/erac127  0.479
2022 Liu Y, Wang S, Li L, Yang T, Dong S, Wei T, Wu S, Liu Y, Gong Y, Feng X, Ma J, Chang G, Huang J, Yang Y, Wang H, ... ... Jiao Y, et al. The Cycas genome and the early evolution of seed plants. Nature Plants. PMID 35437001 DOI: 10.1038/s41477-022-01129-7  0.491
2022 Jiang Y, Hu X, Yuan Y, Guo X, Chase MW, Ge S, Li J, Fu J, Li K, Hao M, Wang Y, Jiao Y, Jiang W, Jin X. The Gastrodia menghaiensis (Orchidaceae) genome provides new insights of orchid mycorrhizal interactions. Bmc Plant Biology. 22: 179. PMID 35392808 DOI: 10.1186/s12870-022-03573-1  0.395
2022 Wen X, Li J, Wang L, Lu C, Gao Q, Xu P, Pu Y, Zhang Q, Hong Y, Hong L, Huang H, Xin H, Wu X, Kang D, Gao K, ... ... Jiao Y, et al. The chrysanthemum lavandulifolium genome and the molecular mechanism underlying diverse capitulum types. Horticulture Research. PMID 35039834 DOI: 10.1093/hr/uhab022  0.423
2022 Li L, Chen X, Fang D, Dong S, Guo X, Li N, Campos-Dominguez L, Wang W, Liu Y, Lang X, Peng Y, Tian D, Thomas DC, Mu W, Liu M, ... ... Jiao Y, et al. Genomes shed light on the evolution of Begonia, a mega-diverse genus. The New Phytologist. PMID 34997964 DOI: 10.1111/nph.17949  0.427
2021 Wang X, Yan X, Hu Y, Qin L, Wang D, Jia J, Jiao Y. A recent burst of gene duplications in Triticeae. Plant Communications. 3: 100268. PMID 35529951 DOI: 10.1016/j.xplc.2021.100268  0.328
2021 Yu T, Hu Y, Zhang Y, Zhao R, Yan X, Dayananda B, Wang J, Jiao Y, Li J, Yi X. Whole-genome sequencing of Acer catalpifolium reveals evolutionary history of endangered species. Genome Biology and Evolution. PMID 34878129 DOI: 10.1093/gbe/evab271  0.441
2021 Lu J, Luo M, Wang L, Li K, Yu Y, Yang W, Gong P, Gao H, Li Q, Zhao J, Wu L, Zhang M, Liu X, Zhang X, Zhang X, ... ... Jiao Y, et al. The Physalis floridana genome provides insights into the biochemical and morphological evolution of Physalis fruits. Horticulture Research. 8: 244. PMID 34795210 DOI: 10.1038/s41438-021-00705-w  0.34
2021 Qin L, Hu Y, Wang J, Wang X, Zhao R, Shan H, Li K, Xu P, Wu H, Yan X, Liu L, Yi X, Wanke S, Bowers JE, Leebens-Mack JH, ... ... Jiao Y, et al. Insights into angiosperm evolution, floral development and chemical biosynthesis from the Aristolochia fimbriata genome. Nature Plants. PMID 34475528 DOI: 10.1038/s41477-021-00990-2  0.674
2020 Xie J, Zhao H, Li K, Zhang R, Jiang Y, Wang M, Guo X, Yu B, Kong H, Jiao Y, Xu G. A chromosome-scale reference genome of Aquilegia oxysepala var. kansuensis. Horticulture Research. 7: 113. PMID 34193816 DOI: 10.1038/s41438-020-0328-y  0.484
2020 Liu PL, Zhang X, Mao JF, Hong YM, Zhang RG, E Y, Nie S, Jia K, Jiang CK, He J, Shen W, He Q, Zheng W, Abbas S, Jewaria PK, ... ... Jiao Y, et al. The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements. Genome Biology. 21: 291. PMID 33267872 DOI: 10.1186/s13059-020-02198-7  0.387
2020 Zhang L, Wu S, Chang X, Wang X, Zhao Y, Xia Y, Trigiano RN, Jiao Y, Chen F. The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress. Plant, Cell & Environment. PMID 33001478 DOI: 10.1111/pce.13898  0.466
2020 Chen Y, Song W, Xie X, Wang Z, Guan P, Peng H, Jiao Y, Ni Z, Sun Q, Guo W. A Collinearity-incorporating Homology Inference Strategy for Connecting Emerging Assemblies in Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era. Molecular Plant. PMID 32979565 DOI: 10.1016/j.molp.2020.09.019  0.5
2020 Xie J, Zhao H, Li K, Zhang R, Jiang Y, Wang M, Guo X, Yu B, Kong H, Jiao Y, Xu G. A chromosome-scale reference genome of var. . Horticulture Research. 7: 113. PMID 32637141 DOI: 10.1038/S41438-020-0328-Y  0.559
2020 Zhang J, Fu XX, Li RQ, Zhao X, Liu Y, Li MH, Zwaenepoel A, Ma H, Goffinet B, Guan YL, Xue JY, Liao YY, Wang QF, Wang QH, Wang JY, ... ... Jiao YN, et al. The hornwort genome and early land plant evolution. Nature Plants. PMID 32042158 DOI: 10.1038/S41477-019-0588-4  0.55
2020 Ali R, Jiao Y, Kerr Wall P, Patching SG, Ahmad I, Lutfulla G, dePamphilis CW. In silico identification and structure function analysis of a putative coclaurine N-methyltransferase from Aristolochia fimbriata. Computational Biology and Chemistry. 85: 107201. PMID 31986303 DOI: 10.1016/J.Compbiolchem.2020.107201  0.536
2020 Zhang X, Li X, Zhao R, Zhou Y, Jiao Y. Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families. The New Phytologist. PMID 31967665 DOI: 10.1111/Nph.16445  0.326
2019 Zhang L, Chen F, Zhang X, Li Z, Zhao Y, Lohaus R, Chang X, Dong W, Ho SYW, Liu X, Song A, Chen J, Guo W, Wang Z, Zhuang Y, ... ... Jiao Y, et al. The water lily genome and the early evolution of flowering plants. Nature. PMID 31853069 DOI: 10.1038/S41586-019-1852-5  0.525
2019 Liu J, Shi C, Shi CC, Li W, Zhang QJ, Zhang Y, Li K, Lu HF, Shi C, Zhu ST, Xiao ZY, Nan H, Yue Y, Zhu XG, Wu Y, ... ... Jiao YN, et al. The Chromosome-based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis. Molecular Plant. PMID 31838037 DOI: 10.1016/J.Molp.2019.10.017  0.529
2019 Wu S, Han B, Jiao Y. Genetic contribution of paleopolyploidy to adaptive evolution in angiosperms. Molecular Plant. PMID 31678615 DOI: 10.1016/J.Molp.2019.10.012  0.459
2019 Yoshida S, Kim S, Wafula EK, Tanskanen J, Kim YM, Honaas L, Yang Z, Spallek T, Conn CE, Ichihashi Y, Cheong K, Cui S, Der JP, Gundlach H, Jiao Y, et al. Genome Sequence of Striga asiatica Provides Insight into the Evolution of Plant Parasitism. Current Biology : Cb. PMID 31522940 DOI: 10.1016/J.Cub.2019.07.086  0.65
2019 Guo H, Jiao Y, Tan X, Wang X, Huang X, Jin H, Paterson AH. Gene duplication and genetic innovation in cereal genomes. Genome Research. PMID 30651279 DOI: 10.1101/Gr.237511.118  0.535
2018 Hu Y, Zhao R, Xu P, Jiao Y. The Genome of Opium Poppy Reveals Evolutionary History of Morphinan Pathway. Genomics, Proteomics & Bioinformatics. PMID 30268932 DOI: 10.1016/J.Gpb.2018.09.002  0.499
2018 Rusch M, Nakitandwe J, Shurtleff S, Newman S, Zhang Z, Edmonson MN, Parker M, Jiao Y, Ma X, Liu Y, Gu J, Walsh MF, Becksfort J, Thrasher A, Li Y, et al. Clinical cancer genomic profiling by three-platform sequencing of whole genome, whole exome and transcriptome. Nature Communications. 9: 3962. PMID 30262806 DOI: 10.1038/S41467-018-06485-7  0.396
2018 Jiao Y. Double the Genome, Double the Fun: Genome Duplications in Angiosperms. Molecular Plant. 11: 357-358. PMID 29476919 DOI: 10.1016/J.Molp.2018.02.009  0.507
2017 Zhao G, Zou C, Li K, Wang K, Li T, Gao L, Zhang X, Wang H, Yang Z, Liu X, Jiang W, Mao L, Kong X, Jiao Y, Jia J. The Aegilops tauschii genome reveals multiple impacts of transposons. Nature Plants. PMID 29158546 DOI: 10.1038/S41477-017-0067-8  0.512
2017 Liu Y, Zhang W, Zhang K, You Q, Yan H, Jiao Y, Jiang J, Xu W, Su Z. Genome-wide mapping of DNase I hypersensitive sites reveals chromatin accessibility changes in Arabidopsis euchromatin and heterochromatin regions under extended darkness. Scientific Reports. 7: 4093. PMID 28642500 DOI: 10.1038/S41598-017-04524-9  0.375
2016 Sezen UU, Barney JN, Atwater DZ, Pederson GA, Pederson JF, Chandler JM, Cox TS, Cox S, Dotray P, Kopec D, Smith SE, Schroeder J, Wright SD, Jiao Y, Kong W, et al. Multi-Phase US Spread and Habitat Switching of a Post-Columbian Invasive, Sorghum halepense. Plos One. 11: e0164584. PMID 27755565 DOI: 10.1371/Journal.Pone.0164584  0.309
2016 Darzi Y, Jiao Y, Hasegawa M, Moon H, Núñez G, Inohara N, Raes J. The Genomic Sequence of the Oral Pathobiont Strain NI1060 Reveals Unique Strategies for Bacterial Competition and Pathogenicity. Plos One. 11: e0158866. PMID 27409077 DOI: 10.1371/Journal.Pone.0158866  0.357
2016 Lee H, Golicz AA, Bayer P, Jiao Y, Tang H, Paterson AH, Sablok G, Krishnaraj RR, Chan CK, Batley J, Kendrick GA, Larkum AW, Ralph PJ, Edwards D. The genome of a southern hemisphere seagrass species (Zostera muelleri). Plant Physiology. PMID 27373688 DOI: 10.1104/Pp.16.00868  0.523
2016 Jiao Y, Burke JJ, Chopra R, Burow G, Chen J, Wang B, Hayes C, Emendack Y, Ware D, Xin Z. A Sorghum Mutant Resource as an Efficient Platform for Gene Discovery in Grasses. The Plant Cell. PMID 27354556 DOI: 10.1105/Tpc.16.00373  0.362
2015 Yu H, Tian C, Yu Y, Jiao Y. Transcriptome survey of the contribution of alternative splicing to proteome diversity in Arabidopsis thaliana. Molecular Plant. PMID 26742955 DOI: 10.1016/J.Molp.2015.12.018  0.314
2014 Jiao Y, Li J, Tang H, Paterson AH. Integrated syntenic and phylogenomic analyses reveal an ancient genome duplication in monocots. The Plant Cell. 26: 2792-802. PMID 25082857 DOI: 10.1105/Tpc.114.127597  0.567
2014 Jiao Y, Paterson AH. Polyploidy-associated genome modifications during land plant evolution. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 369. PMID 24958928 DOI: 10.1098/Rstb.2013.0355  0.564
2013 Ming R, VanBuren R, Liu Y, Yang M, Han Y, Li LT, Zhang Q, Kim MJ, Schatz MC, Campbell M, Li J, Bowers JE, Tang H, Lyons E, Ferguson AA, ... ... Jiao Y, et al. Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.). Genome Biology. 14: R41. PMID 23663246 DOI: 10.1186/Gb-2013-14-5-R41  0.565
2013 Zhang Y, Fernandez-Aparicio M, Wafula EK, Das M, Jiao Y, Wickett NJ, Honaas LA, Ralph PE, Wojciechowski MF, Timko MP, Yoder JI, Westwood JH, Depamphilis CW. Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species. Bmc Evolutionary Biology. 13: 48. PMID 23425243 DOI: 10.1186/1471-2148-13-48  0.587
2013 Bliss BJ, Wanke S, Barakat A, Ayyampalayam S, Wickett N, Wall PK, Jiao Y, Landherr L, Ralph PE, Hu Y, Neinhuis C, Leebens-Mack J, Arumuganathan K, Clifton SW, Maximova SN, et al. Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies. Bmc Plant Biology. 13: 13. PMID 23347749 DOI: 10.1186/1471-2229-13-13  0.589
2012 Jiao Y, Leebens-Mack J, Ayyampalayam S, Bowers JE, McKain MR, McNeal J, Rolf M, Ruzicka DR, Wafula E, Wickett NJ, Wu X, Zhang Y, Wang J, Zhang Y, Carpenter EJ, et al. A genome triplication associated with early diversification of the core eudicots. Genome Biology. 13: R3. PMID 22280555 DOI: 10.1186/Gb-2012-13-1-R3  0.681
2011 Zuccolo A, Bowers JE, Estill JC, Xiong Z, Luo M, Sebastian A, Goicoechea JL, Collura K, Yu Y, Jiao Y, Duarte J, Tang H, Ayyampalayam S, Rounsley S, Kudrna D, et al. A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure. Genome Biology. 12: R48. PMID 21619600 DOI: 10.1186/Gb-2011-12-5-R48  0.716
2011 Jiao Y, Wickett NJ, Ayyampalayam S, Chanderbali AS, Landherr L, Ralph PE, Tomsho LP, Hu Y, Liang H, Soltis PS, Soltis DE, Clifton SW, Schlarbaum SE, Schuster SC, Ma H, et al. Ancestral polyploidy in seed plants and angiosperms. Nature. 473: 97-100. PMID 21478875 DOI: 10.1038/Nature09916  0.688
2011 Liang H, Ayyampalayam S, Wickett N, Barakat A, Xu Y, Landherr L, Ralph PE, Jiao Y, Xu T, Schlarbaum SE, Ma H, Leebens-Mack JH, dePamphilis CW. Generation of a large-scale genomic resource for functional and comparative genomics in Liriodendron tulipifera L Tree Genetics and Genomes. 7: 941-954. DOI: 10.1007/S11295-011-0386-2  0.667
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