Maike K. Aurich - Publications

Affiliations: 
2010-2014 Center for Systems Biology University of Iceland, Reykjavík, Iceland 

12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Baldini F, Hertel J, Sandt E, Thinnes CC, Neuberger-Castillo L, Pavelka L, Betsou F, Krüger R, Thiele I. Parkinson's disease-associated alterations of the gut microbiome predict disease-relevant changes in metabolic functions. Bmc Biology. 18: 62. PMID 32517799 DOI: 10.1186/S12915-020-00775-7  0.52
2020 Thiele I, Sahoo S, Heinken A, Hertel J, Heirendt L, Aurich MK, Fleming RM. Personalized whole-body models integrate metabolism, physiology, and the gut microbiome. Molecular Systems Biology. 16: e8982. PMID 32463598 DOI: 10.15252/Msb.20198982  0.88
2019 Poupin N, Tremblay-Franco M, Amiel A, Canlet C, Rémond D, Debrauwer L, Dardevet D, Thiele I, Aurich MK, Jourdan F, Savary-Auzeloux I, Polakof S. Arterio-venous metabolomics exploration reveals major changes across liver and intestine in the obese Yucatan minipig. Scientific Reports. 9: 12527. PMID 31467335 DOI: 10.1038/S41598-019-48997-2  0.88
2019 Heirendt L, Arreckx S, Pfau T, Mendoza SN, Richelle A, Heinken A, Haraldsdóttir HS, Wachowiak J, Keating SM, Vlasov V, Magnusdóttir S, Ng CY, Preciat G, Žagare A, Chan SHJ, ... Aurich MK, et al. Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. Nature Protocols. PMID 30787451 DOI: 10.1038/S41596-018-0098-2  0.88
2018 Brunk E, Sahoo S, Zielinski DC, Altunkaya A, Dräger A, Mih N, Gatto F, Nilsson A, Preciat Gonzalez GA, Aurich MK, Prlić A, Sastry A, Danielsdottir AD, Heinken A, Noronha A, et al. Recon3D enables a three-dimensional view of gene variation in human metabolism. Nature Biotechnology. PMID 29457794 DOI: 10.1038/Nbt.4072  0.88
2017 Aurich MK, Fleming RMT, Thiele I. A systems approach reveals distinct metabolic strategies among the NCI-60 cancer cell lines. Plos Computational Biology. 13: e1005698. PMID 28806730 DOI: 10.1371/Journal.Pcbi.1005698  0.88
2016 Aurich MK, Fleming RM, Thiele I. MetaboTools: A Comprehensive Toolbox for Analysis of Genome-Scale Metabolic Models. Frontiers in Physiology. 7: 327. PMID 27536246 DOI: 10.3389/Fphys.2016.00327  0.88
2016 Aurich MK, Thiele I. Computational Modeling of Human Metabolism and Its Application to Systems Biomedicine. Methods in Molecular Biology (Clifton, N.J.). 1386: 253-81. PMID 26677187 DOI: 10.1007/978-1-4939-3283-2_12  0.6
2015 Aurich MK, Paglia G, Rolfsson Ó, Hrafnsdóttir S, Magnúsdóttir M, Stefaniak MM, Palsson BØ, Fleming RM, Thiele I. Prediction of intracellular metabolic states from extracellular metabolomic data. Metabolomics : Official Journal of the Metabolomic Society. 11: 603-619. PMID 25972769 DOI: 10.1007/S11306-014-0721-3  0.6
2014 Sahoo S, Aurich MK, Jonsson JJ, Thiele I. Membrane transporters in a human genome-scale metabolic knowledgebase and their implications for disease. Frontiers in Physiology. 5: 91. PMID 24653705 DOI: 10.3389/Fphys.2014.00091  0.6
2013 Thiele I, Swainston N, Fleming RM, Hoppe A, Sahoo S, Aurich MK, Haraldsdottir H, Mo ML, Rolfsson O, Stobbe MD, Thorleifsson SG, Agren R, Bölling C, Bordel S, Chavali AK, et al. A community-driven global reconstruction of human metabolism. Nature Biotechnology. 31: 419-25. PMID 23455439 DOI: 10.1038/Nbt.2488  0.6
2012 Aurich MK, Thiele I. Contextualization procedure and modeling of monocyte specific TLR signaling. Plos One. 7: e49978. PMID 23236359 DOI: 10.1371/Journal.Pone.0049978  0.6
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