| Year |
Citation |
Score |
| 2020 |
Truszkowski J, Scornavacca C, Pardi F. Computing the probability of gene trees concordant with the species tree in the multispecies coalescent. Theoretical Population Biology. PMID 33333117 DOI: 10.1016/j.tpb.2020.12.002 |
0.36 |
|
| 2018 |
Kelk S, Pardi F, Scornavacca C, van Iersel L. Finding a most parsimonious or likely tree in a network with respect to an alignment. Journal of Mathematical Biology. PMID 30121824 DOI: 10.1007/s00285-018-1282-2 |
0.36 |
|
| 2017 |
Gambette P, van Iersel L, Jones M, Lafond M, Pardi F, Scornavacca C. Rearrangement moves on rooted phylogenetic networks. Plos Computational Biology. 13: e1005611. PMID 28763439 DOI: 10.1371/journal.pcbi.1005611 |
0.36 |
|
| 2016 |
Gambette P, van Iersel L, Kelk S, Pardi F, Scornavacca C. Do Branch Lengths Help to Locate a Tree in a Phylogenetic Network? Bulletin of Mathematical Biology. PMID 27659024 DOI: 10.1007/s11538-016-0199-4 |
0.36 |
|
| 2016 |
Binet M, Gascuel O, Scornavacca C, P Douzery EJ, Pardi F. Fast and accurate branch lengths estimation for phylogenomic trees. Bmc Bioinformatics. 17: 23. PMID 26744021 DOI: 10.1186/s12859-015-0821-8 |
1 |
|
| 2015 |
Pardi F, Scornavacca C. Reconstructible phylogenetic networks: do not distinguish the indistinguishable. Plos Computational Biology. 11: e1004135. PMID 25849429 DOI: 10.1371/journal.pcbi.1004135 |
0.36 |
|
| 2015 |
Pardi F, Scornavacca C. Reconstructible Phylogenetic Networks: Do Not Distinguish the Indistinguishable Plos Computational Biology. 11. DOI: 10.1371/journal.pcbi.1004135 |
1 |
|
| 2012 |
Pardi F, Gascuel O. Combinatorics of distance-based tree inference Proceedings of the National Academy of Sciences of the United States of America. 109: 16443-16448. PMID 23012403 DOI: 10.1073/pnas.1118368109 |
1 |
|
| 2010 |
Pardi F, Guillemot S, Gascuel O. Robustness of Phylogenetic Inference Based on Minimum Evolution Bulletin of Mathematical Biology. 72: 1820-1839. PMID 20449671 DOI: 10.1007/s11538-010-9510-y |
1 |
|
| 2010 |
Alon N, Chor B, Pardi F, Rapoport A. Approximate maximum parsimony and ancestral maximum likelihood Ieee/Acm Transactions On Computational Biology and Bioinformatics. 7: 183-187. PMID 20150680 DOI: 10.1109/TCBB.2008.13 |
1 |
|
| 2009 |
Minh BQ, Pardi F, Klaere S, Von Haeseler A. Budgeted phylogenetic diversity on circular split systems Ieee/Acm Transactions On Computational Biology and Bioinformatics. 6: 22-29. PMID 19179696 DOI: 10.1109/TCBB.2008.54 |
1 |
|
| 2008 |
Faller B, Pardi F, Steel M. Distribution of phylogenetic diversity under random extinction Journal of Theoretical Biology. 251: 286-296. PMID 18199459 DOI: 10.1016/j.jtbi.2007.11.034 |
1 |
|
| 2008 |
Tress ML, Wesselink JJ, Frankish A, López G, Goldman N, Löytynoja A, Massingham T, Pardi F, Whelan S, Harrow J, Valencia A. Determination and validation of principal gene products. Bioinformatics (Oxford, England). 24: 11-7. PMID 18006548 DOI: 10.1093/bioinformatics/btm547 |
1 |
|
| 2007 |
Margulies EH, Cooper GM, Asimenos G, Thomas DJ, Dewey CN, Siepel A, Birney E, Keefe D, Schwartz AS, Hou M, Taylor J, Nikolaev S, Montoya-Burgos JI, Löytynoja A, Whelan S, ... Pardi F, et al. Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome. Genome Research. 17: 760-74. PMID 17567995 DOI: 10.1101/gr.6034307 |
1 |
|
| 2007 |
Pardi F, Goldman N. Resource-aware taxon selection for maximizing phylogenetic diversity. Systematic Biology. 56: 431-44. PMID 17558965 DOI: 10.1080/10635150701411279 |
1 |
|
| 2005 |
Pardi F, Goldman N. Species choice for comparative genomics: being greedy works. Plos Genetics. 1: e71. PMID 16327885 DOI: 10.1371/journal.pgen.0010071 |
1 |
|
| 2005 |
Pardi F, Lewis CM, Whittaker JC. SNP selection for association studies: Maximizing power across SNP choice and study size Annals of Human Genetics. 69: 733-746. PMID 16266411 DOI: 10.1111/j.1529-8817.2005.00202.x |
1 |
|
| 2005 |
Pardi F, Levinson DF, Lewis CM. GSMA: Software implementation of the genome search meta-analysis method Bioinformatics. 21: 4430-4431. PMID 16249265 DOI: 10.1093/bioinformatics/bti725 |
1 |
|
| 2005 |
Fisher SA, Abecasis GR, Yashar BM, Zareparsi S, Swaroop A, Iyengar SK, Klein BE, Klein R, Lee KE, Majewski J, Schultz DW, Klein ML, Seddon JM, Santangelo SL, Weeks DE, ... ... Pardi F, et al. Meta-analysis of genome scans of age-related macular degeneration. Human Molecular Genetics. 14: 2257-64. PMID 15987700 DOI: 10.1093/hmg/ddi230 |
1 |
|
| 2005 |
Pardi F, Sibly RM, Wilkinson MJ, Whittaker JC. On the structural differences between markers and genomic AC microsatellites Journal of Molecular Evolution. 60: 688-693. PMID 15983876 DOI: 10.1007/s00239-004-0274-6 |
1 |
|
| 2005 |
Pardi F, Goldman N. Species choice for comparative genomics: Being greedy works Plos Genetics. 1: 0672-0675. DOI: 10.1371 /journal.pgen.0010071 |
1 |
|
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