Dimitri Karamata - Publications

Affiliations: 
University of Lausanne, Lausanne, Vaud, Switzerland 

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2006 Freymond PP, Lazarevic V, Soldo B, Karamata D. Poly(glucosyl-N-acetylgalactosamine 1-phosphate), a wall teichoic acid of Bacillus subtilis 168: Its biosynthetic pathway and mode of attachment to peptidoglycan Microbiology. 152: 1709-1718. PMID 16735734 DOI: 10.1099/Mic.0.28814-0  0.38
2005 Guy L, Karamata D, Moreillon P, Roten CA. Genometrics as an essential tool for the assembly of whole genome sequences: the example of the chromosome of Bifidobacterium longum NCC2705. Bmc Microbiology. 5: 60. PMID 16223444 DOI: 10.1186/1471-2180-5-60  0.64
2003 Soldo B, Scotti C, Karamata D, Lazarevic V. The Bacillus subtilis Gne (GneA, GalE) protein can catalyse UDP-glucose as well as UDP-N-acetylglucosamine 4-epimerisation. Gene. 319: 65-9. PMID 14597172 DOI: 10.1016/S0378-1119(03)00793-5  0.34
2003 Kobayashi K, Ehrlich SD, Albertini A, Amati G, Andersen KK, Arnaud M, Asai K, Ashikaga S, Aymerich S, Bessieres P, Boland F, Brignell SC, Bron S, Bunai K, Chapuis J, ... ... Karamata D, et al. Essential Bacillus subtilis genes. Proceedings of the National Academy of Sciences of the United States of America. 100: 4678-83. PMID 12682299 DOI: 10.1073/Pnas.0730515100  0.367
2002 Soldo B, Lazarevic V, Pooley HM, Karamata D. Characterization of a Bacillus subtilis thermosensitive teichoic acid-deficient mutant: Gene mnaA (yvyH) encodes the UDP-N-Acetylglucosamine 2-epimerase Journal of Bacteriology. 184: 4316-4320. PMID 12107153 DOI: 10.1128/Jb.184.15.4316-4320.2002  0.35
2002 Soldo B, Lazarevic V, Karamata D. tagO is involved in the synthesis of all anionic cell-wall polymers in Bacillus subtilis 168 Microbiology. 148: 2079-2087. PMID 12101296 DOI: 10.1099/00221287-148-7-2079  0.396
2002 Lazarevic V, Abellan FX, Möller SB, Karamata D, Mauël C. Comparative of ribitol and glycerol teichoic acid genes in Bacillus subtilis W23 and 168: Identical function, similar divergent organization, but different regulation Microbiology. 148: 815-824. PMID 11882717 DOI: 10.1099/00221287-148-3-815  0.435
2002 Roten CA, Gamba P, Barblan JL, Karamata D. Comparative Genometrics (CG): a database dedicated to biometric comparisons of whole genomes. Nucleic Acids Research. 30: 142-4. PMID 11752276 DOI: 10.1093/Nar/30.1.142  0.704
2002 Lazarevic V, Pooley HM, Mauël C, Karamata D. Teichoic and Teichuronic Acids from Gram‐Positive Bacteria Biopolymers Online. 465-492. DOI: 10.1002/3527600035.Bpol5018  0.32
2000 Regamey A, Lazarevic V, Hauser P, Karamata D. Study of chromosome rearrangements associated with the trpE26 mutation of Bacillus subtilis Molecular Microbiology. 36: 1234-1249. PMID 10931276 DOI: 10.1046/J.1365-2958.2000.01939.X  0.452
2000 Pooley HM, Karamata D. Incorporation of [2-3H]glycerol into cell surface components of Bacillus subtilis 168 and thermosensitive mutants affected in wall teichoic acid synthesis: effect of tunicamycin. Microbiology (Reading, England). 146: 797-805. PMID 10784037 DOI: 10.1099/00221287-146-4-797  0.348
1999 Bengtsson J, Rivolta C, Hederstedt L, Karamata D. Bacillus subtilis contains two small c-type cytochromes with homologous heme domains but different types of membrane anchors. Journal of Biological Chemistry. 274: 26179-26184. PMID 10473570 DOI: 10.1074/Jbc.274.37.26179  0.361
1999 Lazarevic V, Düsterhöft A, Soldo B, Hilbert H, Mauël C, Karamata D. Nucleotide sequence of the Bacillus subtilis temperate bacteriophage SPβc2 Microbiology. 145: 1055-1067. PMID 10376821 DOI: 10.1099/13500872-145-5-1055  0.469
1999 Pagni M, Lazarevic V, Soldo B, Karamata D. Assay for UDPglucose 6-dehydrogenase in phosphate-starved cells: Gene tuaD of Bacillus subtilis 168 encodes the UDPglucose 6-dehydrogenase involved in teichuronic acid synthesis Microbiology. 145: 1049-1053. PMID 10376820 DOI: 10.1099/13500872-145-5-1049  0.368
1999 Margot P, Pagni M, Karamata D. Bacillus subtilis 168 gene lytF encodes a gamma-D-glutamate-meso-diaminopimelate muropeptidase expressed by the alternative vegetative sigma factor, sigmaD. Microbiology (Reading, England). 145: 57-65. PMID 10206711 DOI: 10.1099/13500872-145-1-57  0.364
1999 Soldo B, Lazarevic V, Pagni M, Karamata D. Teichuronic acid operon of Bacillus subtilis 168 Molecular Microbiology. 31: 795-805. PMID 10048024 DOI: 10.1046/J.1365-2958.1999.01218.X  0.374
1998 Robinson C, Rivolta C, Karamata D, Moir A. The product of the yvoC (gerF) gene of Bacillus subtilis is required for spore germination. Microbiology. 144: 3105-3109. PMID 9846746 DOI: 10.1099/00221287-144-11-3105  0.381
1998 Regamey A, Karamata D. The N-acetylmuramoyl-L-alanine amidase encoded by the Bacillus subtilis 168 prophage SPβ Microbiology. 144: 885-893. PMID 9579063 DOI: 10.1099/00221287-144-4-885  0.459
1998 Rivolta C, Soldo B, Lazarevic V, Joris B, Mauël C, Karamata D. A 35.7 kb DNA fragment from the Bacillus subtilis chromosome containing a putative 12.3 kb operon involved in hexuronate catabolism and a perfectly symmetrical hypothetical catabolite-responsive element Microbiology. 144: 877-884. PMID 9579062 DOI: 10.1099/00221287-144-4-877  0.477
1998 Lazarevic V, Soldo B, Düsterhöft A, Hilbert H, Mauël C, Karamata D. Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPβ Proceedings of the National Academy of Sciences of the United States of America. 95: 1692-1697. PMID 9465078 DOI: 10.1073/Pnas.95.4.1692  0.407
1998 Margot P, Whalen M, Gholamhoseinian A, Piggot P, Karamata D. The lytE Gene of Bacillus subtilis 168 Encodes a Cell Wall Hydrolase Journal of Bacteriology. 180: 2272-2272. DOI: 10.1128/Jb.180.8.2272-2272.1998  0.371
1997 Kunst F, Ogasawara N, Moszer I, Albertini AM, Alloni G, Azevedo V, Bertero MG, Bessières P, Bolotin A, Borchert S, Borriss R, Boursier L, Brans A, Braun M, Brignell SC, ... ... Karamata D, et al. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature. 390: 249-56. PMID 9384377 DOI: 10.1038/36786  0.447
1996 Margot P, Lazarevic V, Karamata D. Effect of the SinR protein on the expression of the Bacillus subtilis 168 lytABC operon Microbial Drug Resistance. 2: 119-121. PMID 9158733 DOI: 10.1089/Mdr.1996.2.119  0.314
1996 Pooley HM, Merchante R, Karamata D. Overall Protein Content and Induced Enzyme Components of the Periplasm of Bacillus subtilis Microbial Drug Resistance. 2: 9-15. PMID 9158717 DOI: 10.1089/Mdr.1996.2.9  0.325
1996 Margot P, Karamata D. The wprA gene of Bacillus subtilis 168, expressed during exponential growth, encodes a cell-wall-associated protease. Microbiology. 142: 3437-3444. PMID 9004506 DOI: 10.1099/13500872-142-12-3437  0.41
1996 Soldo B, Lazarevic V, Mauël C, Karamata D. Sequence of the 305 degrees-307 degrees region of the Bacillus subtilis chromosome Microbiology (Reading, England). 142. PMID 8969505 DOI: 10.1099/13500872-142-11-3079  0.487
1996 Kellenberger E, Stauffer E, Häner M, Lustig A, Karamata D. Mechanism of the long tail-fiber deployment of bacteriophages T-even and its role in adsorption, infection and sedimentation. Biophysical Chemistry. 59: 41-59. PMID 8867326 DOI: 10.1016/0301-4622(95)00117-4  0.421
1995 Lazarevic V, Mauel C, Soldo B, Freymond PP, Margot P, Karamata D. Sequence analysis of the 308° to 311° segment of the Bacillus subtilis 168 chromosome, a region devoted to cell wall metabolism, containing non-coding grey holes which reveal chromosomal rearrangements Microbiology. 141: 329-335. PMID 7704262 DOI: 10.1099/13500872-141-2-329  0.433
1995 Merchante R, Pooley HM, Karamata D. A periplasm in Bacillus subtilis. Journal of Bacteriology. 177: 6176-6183. PMID 7592383 DOI: 10.1128/Jb.177.21.6176-6183.1995  0.311
1995 Mauël C, Bauduret A, Chervet C, Beggah S, Karamata D. In Bacillus subtilis 168, teichoic acid of the cross-wall may be different from that of the cylinder: a hypothesis based on transcription analysis of tag genes Microbiology. 141: 2379-2389. PMID 7581998 DOI: 10.1099/13500872-141-10-2379  0.332
1995 Lazarevic V, Karamata D. The tagGH operon of Bacillus subtilis 168 encodes a two-component ABC transporter involved in the metabolism of two wall teichoic acids Molecular Microbiology. 16: 345-355. PMID 7565096 DOI: 10.1111/J.1365-2958.1995.Tb02306.X  0.429
1994 Hauser PM, Karamata D. Ploidy of Bacillus subtilis exfusants: a controversy. II. No experimental support for diploidy and chromosomal silencing Microbiology (Reading, England). 140. PMID 8162188 DOI: 10.1099/13500872-140-1-2  0.317
1994 Hauser PM, Karamata D. A rapid and simple method for Bacillus subtilis transformatian on solid media Microbiology. 140: 1613-1617. PMID 8075803 DOI: 10.1099/13500872-140-7-1613  0.345
1994 Hauser PM, Karamata D. Characterization of the chromosomes of Bacillus subtilis merodiploid strains by quantitative DNA-DNA hybridization Microbiology. 140: 1605-1611. PMID 8075802 DOI: 10.1099/13500872-140-7-1605  0.428
1994 Mauël C, Young M, Monsutti-Grecescu A, Marriott SA, Karamata D. Analysis of Bacillus subtilis tag gene expression using transcriptional fusions Microbiology. 140: 2279-2288. PMID 7952180 DOI: 10.1099/13500872-140-9-2279  0.352
1994 Margot P, Mauël C, Karamata D. The gene of the N-acetylglucosaminidase, a Bacillus subtilis 168 cell wall hydrolase not involved in vegetative cell autolysis. Molecular Microbiology. 12: 535-545. PMID 7934877 DOI: 10.1111/J.1365-2958.1994.Tb01040.X  0.438
1994 Longchamp PF, Mauël C, Karamata D. Lytic enzymes associated with defective prophages of Bacillus subtilis: sequencing and characterization of the region comprising the N-acetylmuramoyl-L-alanine amidase gene of prophage PBSX. Microbiology. 140: 1855-1867. PMID 7921239 DOI: 10.1099/13500872-140-8-1855  0.431
1994 Roten CAH, Pagni M, Margot P, Touri F, Karamata D. Specific labeling of diaminopimelate: a radioassay for the determination of the peptidoglycan cross-linking index. Analytical Biochemistry. 223: 208-211. PMID 7887465 DOI: 10.1006/Abio.1994.1575  0.304
1994 Pooley HM, Karamata D. Chapter 9 Teichoic acid synthesis in Bacillus subtilis: genetic organization and biological roles New Comprehensive Biochemistry. 27: 187-198. DOI: 10.1016/S0167-7306(08)60412-3  0.33
1993 Soldo B, Lazarevic V, Margot P, Karamata D. Sequencing and analysis of the divergon comprising gtaB, the structural gene of UDP-glucose pyrophosphorylase of Bacillus subtilis 168 Journal of General Microbiology. 139: 3185-3195. PMID 8126437 DOI: 10.1099/00221287-139-12-3185  0.405
1992 Margot P, Karamata D. Identification of the structural genes for N-acetylmuramoyl-L-alanine amidase and its modifier in Bacillus subtilis 168: inactivation of these genes by insertional mutagenesis has no effect on growth or cell separation. Molecular Genetics and Genomics. 232: 359-366. PMID 1588906 DOI: 10.1007/Bf00266238  0.43
1992 Hauser PM, Karamata D. Ploidy of Bacillus subtilis exfusants: The haploid nature of cells forming colonies with biparental or prototrophic phenotypes Journal of General Microbiology. 138: 1077-1088. PMID 1527489 DOI: 10.1099/00221287-138-6-1077  0.313
1992 Hauser PM, Karamata D. A method for the determination of bacterial spore DNA content based on isotopic labelling, spore germination and diphenylamine assay; ploidy of spores of several Bacillus species Biochimie. 74: 723-733. PMID 1391052 DOI: 10.1016/0300-9084(92)90145-5  0.362
1992 Lazarevic V, Margot P, Soldo B, Karamata D. Sequencing and analysis of the Bacillus subtilis lytRABC divergon: a regulatory unit encompassing the structural genes of the N-acetylmuramoyl-L-alanine amidase and its modifier Journal of General Microbiology. 138: 1949-1961. PMID 1357079 DOI: 10.1099/00221287-138-9-1949  0.409
1992 Pooley HM, Abellan FX, Karamata D. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase, which is involved in the synthesis of the major wall teichoic acid in Bacillus subtilis 168, is encoded by tagF (rodC). Journal of Bacteriology. 174: 646-649. PMID 1309530 DOI: 10.1128/Jb.174.2.646-649.1992  0.385
1991 Roten CH, Brandt C, Karamata D. Genes involved in meso-diaminopimelate synthesis in Bacillus subtilis: identification of the gene encoding aspartokinase I. Microbiology. 137: 951-962. PMID 1906928 DOI: 10.1099/00221287-137-4-951  0.321
1991 Mauël C, Young M, Karamata D. Genes concerned with synthesis of poly(glycerol phosphate), the essential teichoic acid in Bacillus subtilis strain 168, are organized in two divergent transcription units Microbiology. 137: 929-941. PMID 1906926 DOI: 10.1099/00221287-137-4-929  0.435
1991 Pooley HM, Abellan F, Karamata D. A conditional-lethal mutant of bacillus subtilis 168 with a thermosensitive glycerol-3-phosphate cytidylyltransferase, an enzyme specific for the synthesis of the major wall teichoic acid. Microbiology. 137: 921-928. PMID 1649892 DOI: 10.1099/00221287-137-4-921  0.354
1989 Young M, Mauël C, Margot P, Karamata D. Pseudo-allelic relationship between non-homologous genes concerned with biosynthesis of polyglycerol phosphate and polyribitol phosphate teichoic acids in Bacillus subtilis strains 168 and W23. Molecular Microbiology. 3: 1805-1812. PMID 2516220 DOI: 10.1111/J.1365-2958.1989.Tb00166.X  0.421
1989 Mauël C, Young M, Margot P, Karamata D. The essential nature of teichoic acids in Bacillus subtilis as revealed by insertional mutagenesis. Molecular Genetics and Genomics. 215: 388-394. PMID 2496299 DOI: 10.1007/Bf00427034  0.417
1989 Briehl M, Pooley HM, Karamata D. Mutants of Bacillus subtilis 168 Thermosensitive for Growth and Wall Teichoic Acid Synthesis Microbiology. 135: 1325-1334. DOI: 10.1099/00221287-135-5-1325  0.35
1987 Karamata D, Pooley HM, Monod M. Expression of heterologous genes for wall teichoic acid in Bacillus subtilis 168 Molecular Genetics and Genomics. 207: 73-81. PMID 3110561 DOI: 10.1007/Bf00331493  0.404
1984 Mauël C, Karamata D. Prophage induction in thermosensitive DNA mutants of Bacillus subtilis. Molecular Genetics and Genomics. 194: 451-456. PMID 6429480 DOI: 10.1007/Bf00425557  0.31
1982 Schlaeppi JM, Pooley HM, Karamata D. Identification of cell wall subunits in bacillus subtilis and analysis of their segregation during growth. Journal of Bacteriology. 149: 329-337. PMID 6798023 DOI: 10.1128/Jb.149.1.329-337.1982  0.332
1978 Pooley HM, Schlaeppi J-, Karamata D. Localised insertion of new cell wall in Bacillus subtilis Nature. 274: 264-266. PMID 98715 DOI: 10.1038/274264A0  0.324
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