Vinhthuy T. Phan, Ph.D. - Publications

Affiliations: 
2003 Stony Brook University, Stony Brook, NY, United States 
Area:
Algorithms, Computational Biology, Large-scale Text Analytics and Sentiment Analysis, Social Trends Analysis, Combinatorial Computing Environments

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Tran Q, Gao S, Phan V. Analysis of optimal alignments unfolds aligners' bias in existing variant profiles. Bmc Bioinformatics. 17: 349. PMID 27766935 DOI: 10.1186/S12859-016-1216-1  0.68
2015 Gao S, Pham DT, Phan V. Alignment-free methods for metagenomic profiling Bmc Bioinformatics. 16. DOI: 10.1186/1471-2105-16-S15-P4  0.68
2011 Roy S, Heinrich K, Phan V, Berry MW, Homayouni R. Latent Semantic Indexing of PubMed abstracts for identification of transcription factor candidates from microarray derived gene sets. Bmc Bioinformatics. 12: S19. PMID 22165960 DOI: 10.1186/1471-2105-12-S10-S19  0.68
2010 Phan V, Saha S, Pandey A, Wong TY. Synthetic gene design with a large number of hidden stops. International Journal of Data Mining and Bioinformatics. 4: 377-94. PMID 20815138 DOI: 10.1504/IJDMB.2010.034195  0.68
2009 Phan V, Olusegun George E, Tran QT, Goodwin S, Bodreddigari S, Sutter TR. Analyzing microarray data with transitive directed acyclic graphs. Journal of Bioinformatics and Computational Biology. 7: 135-56. PMID 19226664 DOI: 10.1142/S0219720009003972  0.68
2009 Tran QT, Xu L, Phan V, Goodwin SB, Rahman M, Jin VX, Sutter CH, Roebuck BD, Kensler TW, George EO, Sutter TR. Chemical genomics of cancer chemopreventive dithiolethiones. Carcinogenesis. 30: 480-6. PMID 19126641 DOI: 10.1093/Carcin/Bgn292  0.68
2009 Phan V, Garzon MH. On codeword design in metric DNA spaces Natural Computing. 8: 571-588. DOI: 10.1007/S11047-008-9088-6  0.68
2008 Phan V, Furlotte NA. Motif Tool Manager: a web-based framework for motif discovery. Bioinformatics (Oxford, England). 24: 2930-1. PMID 19017656 DOI: 10.1093/Bioinformatics/Btn559  0.68
2008 Phan V, Saha S, Pandey A, Wong TY. Synthetic gene design with a large number of hidden stop codons Proceedings - Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2008. 141-146. DOI: 10.1109/BIBM.2008.42  0.68
2006 Bobba KC, Neel AJ, Phan V, Garzon MH. "Reasoning" and "talking" DNA: Can DNA understand English? Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4287: 337-349. DOI: 10.1007/11925903_26  0.68
2006 Garzon MH, Phan V, Roy S, Neel AJ. In search of optimal codes for DNA computing Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4287: 143-156. DOI: 10.1007/11925903_11  0.68
2006 Garzon MH, Phan V, Bobba KC, Kontham R. Sensitivity and capacity of microarray encodings Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3892: 81-95. DOI: 10.1007/11753681_7  0.68
2004 Phan V, Skiena S. An improved time-sensitive metaheuristic framework for combinatorial optimization Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3059: 432-445. DOI: 10.1007/978-3-540-24838-5_32  0.68
2001 Phan VT, Skiena SS. Dealing with errors in interactive sequencing by hybridization. Bioinformatics (Oxford, England). 17: 862-70. PMID 11673230 DOI: 10.1093/Bioinformatics/17.10.862  1
Show low-probability matches.