Year |
Citation |
Score |
2020 |
Tran Q, Phan V. Assembling Reads Improves Taxonomic Classification of Species. Genes. 11. PMID 32824429 DOI: 10.3390/Genes11080946 |
0.318 |
|
2019 |
Phan V, Pham DT, Melton C, Ramsey A, Daigle BJ, Mandel JR. icHET: Interactive Visualization of Cytoplasmic Heteroplasmy. Bioinformatics (Oxford, England). PMID 31038667 DOI: 10.1093/Bioinformatics/Btz300 |
0.301 |
|
2018 |
Vo NS, Phan V. Leveraging known genomic variants to improve detection of variants, especially close-by Indels. Bioinformatics (Oxford, England). PMID 29590294 DOI: 10.1093/Bioinformatics/Bty183 |
0.329 |
|
2017 |
Tran Q, Pham DT, Phan V. Using 16S rRNA gene as marker to detect unknown bacteria in microbial communities. Bmc Bioinformatics. 18: 499. PMID 29297282 DOI: 10.1186/S12859-017-1901-8 |
0.339 |
|
2017 |
Pham DT, Gao S, Phan V. An accurate and fast alignment-free method for profiling microbial communities. Journal of Bioinformatics and Computational Biology. 1740001. PMID 28345370 DOI: 10.1142/S0219720017400017 |
0.341 |
|
2016 |
Tran Q, Gao S, Phan V. Analysis of optimal alignments unfolds aligners' bias in existing variant profiles. Bmc Bioinformatics. 17: 349. PMID 27766935 DOI: 10.1186/S12859-016-1216-1 |
0.382 |
|
2015 |
Phan V, Gao S, Tran Q, Vo NS. How genome complexity can explain the difficulty of aligning reads to genomes. Bmc Bioinformatics. 16: S3. PMID 26678826 DOI: 10.1186/1471-2105-16-S17-S3 |
0.313 |
|
2015 |
Tran Q, Gao S, Vo NS, Phan V. A linear model for predicting performance of short-read aligners using genome complexity Bmc Bioinformatics. 16: 17. DOI: 10.1186/1471-2105-16-S15-P17 |
0.352 |
|
2014 |
Vo NS, Tran Q, Niraula N, Phan V. RandAL: a randomized approach to aligning DNA sequences to reference genomes. Bmc Genomics. 15: S2. PMID 25081493 DOI: 10.1186/1471-2164-15-S5-S2 |
0.384 |
|
2014 |
O’kello KL, Phan V. Determining gene response patterns of time series gene expression data using R Bmc Bioinformatics. 15. DOI: 10.1186/1471-2105-15-S10-P24 |
0.335 |
|
2014 |
Tran Q, Phan V. Alignment of short reads to multiple genomes using hashing Bmc Bioinformatics. 15. DOI: 10.1186/1471-2105-15-S10-P23 |
0.345 |
|
2014 |
Vo NS, Phan V. Exploiting the bootstrap method to analyze patterns of gene expression Bmc Bioinformatics. 15. DOI: 10.1186/1471-2105-15-S10-P19 |
0.313 |
|
2013 |
Vo NS, Sutter TR, Phan V. mDAG: A web tool for analyzing, visualizing, and interpreting response patterns in gene expression data with multiple treatments Advances in Bioscience and Biotechnology. 4: 706-709. DOI: 10.4236/Abb.2013.46093 |
0.313 |
|
2011 |
Roy S, Heinrich K, Phan V, Berry MW, Homayouni R. Latent Semantic Indexing of PubMed abstracts for identification of transcription factor candidates from microarray derived gene sets. Bmc Bioinformatics. 12: S19. PMID 22165960 DOI: 10.1186/1471-2105-12-S10-S19 |
0.314 |
|
2011 |
Phan VT, Vo NS, Sutter TR. mDAG: a web-based tool for analyzing microarray data with multiple treatments Bmc Bioinformatics. 12. DOI: 10.1186/1471-2105-12-S7-A7 |
0.308 |
|
2004 |
Phan V, Skiena S. An improved time-sensitive metaheuristic framework for combinatorial optimization Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3059: 432-445. DOI: 10.1007/978-3-540-24838-5_32 |
0.527 |
|
2003 |
Phan V, Skiena S, Sumazin P. A model for analyzing black-box optimization Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2748: 424-438. |
0.478 |
|
2002 |
Phan V, Sumazin P, Skiena S. A time-sensitive system for black-box combinatorial optimization Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2409: 16-28. |
0.475 |
|
2001 |
Phan VT, Skiena SS. Dealing with errors in interactive sequencing by hybridization. Bioinformatics (Oxford, England). 17: 862-70. PMID 11673230 DOI: 10.1093/Bioinformatics/17.10.862 |
0.504 |
|
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