Brent A. Kronmiller, Ph.D. - Publications

Affiliations: 
2008 Plant Pathology Iowa State University, Ames, IA, United States 
Area:
Bioinformatics Biology

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Irizarry KJL, Zhong W, Sun Y, Kronmiller BA, Darmani NA. RNA sequencing least shrew () brainstem and gut transcripts following administration of a selective substance P neurokinin NK receptor agonist and antagonist expands genomics resources for emesis research. Frontiers in Genetics. 14: 975087. PMID 36865388 DOI: 10.3389/fgene.2023.975087  0.405
2022 Kronmiller BA, Feau N, Shen D, Tabima JF, Ali SS, Armitage AD, Arredondo FD, Bailey BA, Bollmann SR, Dale A, Harrison R, Hrywkiw K, Kasuga T, McDougal R, Nellist CF, et al. Comparative genomic analysis of 31 genomes reveal genome plasticity and horizontal gene transfer. Molecular Plant-Microbe Interactions : Mpmi. PMID 36306437 DOI: 10.1094/MPMI-06-22-0133-R  0.524
2022 Vining KJ, Pandelova I, Lange I, Parrish AN, Lefors A, Kronmiller B, Liachko I, Kronenberg Z, Srividya N, Lange BM. Chromosome-Level Genome Assembly of Mentha longifolia L. Reveals Gene Organization Underlying Disease Resistance and Essential Oil Traits. G3 (Bethesda, Md.). PMID 35551385 DOI: 10.1093/g3journal/jkac112  0.481
2021 Padgitt-Cobb LK, Kingan SB, Wells J, Elser J, Kronmiller B, Moore D, Concepcion G, Peluso P, Rank D, Jaiswal P, Henning J, Hendrix DA. A draft phased assembly of the diploid Cascade hop (Humulus lupulus) genome. The Plant Genome. e20072. PMID 33605092 DOI: 10.1002/tpg2.20072  0.568
2020 Tennessen JA, Bollmann SR, Peremyslova E, Kronmiller BA, Sergi C, Hamali B, Blouin MS. Clusters of polymorphic transmembrane genes control resistance to schistosomes in snail vectors. Elife. 9. PMID 32845238 DOI: 10.7554/Elife.59395  0.456
2020 Adams TM, Armitage AD, Sobczyk MK, Bates HJ, Tabima JF, Kronmiller BA, Tyler BM, Grünwald NJ, Dunwell JM, Nellist CF, Harrison RJ. Genomic Investigation of the Strawberry Pathogen Indicates Pathogenicity Is Associated With Transcriptional Variation in Three Key Races. Frontiers in Microbiology. 11: 490. PMID 32351458 DOI: 10.3389/Fmicb.2020.00490  0.396
2020 Fang Y, Coelho MA, Shu H, Schotanus K, Thimmappa BC, Yadav V, Chen H, Malc EP, Wang J, Mieczkowski PA, Kronmiller B, Tyler BM, Sanyal K, Dong S, Nowrousian M, et al. Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages. Plos Genetics. 16: e1008646. PMID 32150559 DOI: 10.1371/Journal.Pgen.1008646  0.492
2020 Kashyap A, Rhodes A, Kronmiller B, Berger J, Champagne A, Davis EW, Finnegan MV, Geniza M, Hendrix DA, Löhr CV, Petro VM, Sharpton TJ, Wells J, Epps CW, Jaiswal P, et al. Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis. Bmc Genomics. 21: 153. PMID 32050897 DOI: 10.1186/S12864-019-6432-4  0.359
2018 Muñoz-Rodríguez P, Carruthers T, Wood JRI, Williams BRM, Weitemier K, Kronmiller B, Ellis D, Anglin NL, Longway L, Harris SA, Rausher MD, Kelly S, Liston A, Scotland RW. Reconciling Conflicting Phylogenies in the Origin of Sweet Potato and Dispersal to Polynesia. Current Biology : Cb. PMID 29657119 DOI: 10.1016/J.Cub.2018.03.020  0.377
2017 Tabima J, Kronmiller B, Press C, Tyler BM, Zasada I, Grünwald NJ. Whole genome sequences of the raspberry and strawberry pathogens Phytophthora rubi and P. fragariae. Molecular Plant-Microbe Interactions : Mpmi. PMID 28682157 DOI: 10.1094/Mpmi-04-17-0081-A  0.438
2017 Alanjary M, Kronmiller B, Adamek M, Blin K, Weber T, Huson D, Philmus B, Ziemert N. The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery. Nucleic Acids Research. PMID 28472505 DOI: 10.1093/Nar/Gkx360  0.309
2017 Ali SS, Shao J, Lary DJ, Kronmiller B, Shen D, Strem MD, Amoako-Attah I, Akrofi AY, Begoude BA, Ten Hoopen GM, Coulibaly K, Kebe BI, Melnick RL, Guiltinan MJ, Tyler BM, et al. Phytophthora megakarya and P. palmivora, closely related causal agents of cacao black pod rot, underwent increases in genome sizes and gene numbers by different mechanisms. Genome Biology and Evolution. PMID 28186564 DOI: 10.1093/Gbe/Evx021  0.511
2015 Troyer RM, Lee JS, Vuyisich M, Chain P, Lo CC, Kronmiller B, Bracha S, Avery AC, VandeWoude S. First Complete Genome Sequence of Felis catus Gammaherpesvirus 1. Genome Announcements. 3. PMID 26543105 DOI: 10.1128/Genomea.01192-15  0.562
2013 Kronmiller BA, Wise RP. TEnest 2.0: computational annotation and visualization of nested transposable elements. Methods in Molecular Biology (Clifton, N.J.). 1057: 305-19. PMID 23918438 DOI: 10.1007/978-1-62703-568-2_22  0.624
2012 Kim C, Zhang D, Auckland SA, Rainville LK, Jakob K, Kronmiller B, Sacks EJ, Deuter M, Paterson AH. SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum Theoretical and Applied Genetics. 124: 1325-1338. PMID 22274765 DOI: 10.1007/s00122-012-1790-1  0.306
2009 Kronmiller BA, Wise RP. Computational finishing of large sequence contigs reveals interspersed nested repeats and gene islands in the rf1-associated region of maize. Plant Physiology. 151: 483-95. PMID 19675151 DOI: 10.1104/Pp.109.143370  0.577
2008 Kronmiller BA, Wise RP. TEnest: automated chronological annotation and visualization of nested plant transposable elements. Plant Physiology. 146: 45-59. PMID 18032588 DOI: 10.1104/Pp.107.110353  0.59
2002 Bergman CM, Pfeiffer BD, Rincón-Limas DE, Hoskins RA, Gnirke A, Mungall CJ, Wang AM, Kronmiller B, Pacleb J, Park S, Stapleton M, Wan K, George RA, de Jong PJ, Botas J, et al. Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome. Genome Biology. 3: RESEARCH0086. PMID 12537575 DOI: 10.1186/Gb-2002-3-12-Research0086  0.647
2002 Kaminker JS, Bergman CM, Kronmiller B, Carlson J, Svirskas R, Patel S, Frise E, Wheeler DA, Lewis SE, Rubin GM, Ashburner M, Celniker SE. The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective. Genome Biology. 3: RESEARCH0084. PMID 12537573 DOI: 10.1186/Gb-2002-3-12-Research0084  0.634
2002 Stapleton M, Carlson J, Brokstein P, Yu C, Champe M, George R, Guarin H, Kronmiller B, Pacleb J, Park S, Wan K, Rubin GM, Celniker SE. A Drosophila full-length cDNA resource. Genome Biology. 3: RESEARCH0080. PMID 12537569 DOI: 10.1186/Gb-2002-3-12-Research0080  0.659
2002 Celniker SE, Wheeler DA, Kronmiller B, Carlson JW, Halpern A, Patel S, Adams M, Champe M, Dugan SP, Frise E, Hodgson A, George RA, Hoskins RA, Laverty T, Muzny DM, et al. Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. Genome Biology. 3: RESEARCH0079. PMID 12537568 DOI: 10.1186/Gb-2002-3-12-Research0079  0.629
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