Saeed Salem, Ph.D. - Publications

Affiliations: 
2009 Rensselaer Polytechnic Institute, Troy, NY, United States 
Area:
Bioinformatics Biology, Computer Science

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Alokshiya M, Salem S, Abed F. A linear delay algorithm for enumerating all connected induced subgraphs. Bmc Bioinformatics. 20: 319. PMID 31216984 DOI: 10.1186/S12859-019-2837-Y  0.481
2019 Anderson J, Azizi M, Salem S, Do H. On the use of usage patterns from telemetry data for test case prioritization Information and Software Technology. 113: 110-130. DOI: 10.1016/J.Infsof.2019.05.008  0.372
2017 Salem S. Template edge similarity graph clustering for mining multiple gene expression datasets International Journal of Data Mining and Bioinformatics. 18: 28. DOI: 10.1504/Ijdmb.2017.10007174  0.39
2015 Huang X, Jennings SF, Bruce B, Buchan A, Cai L, Chen P, Cramer CL, Guan W, Hilgert UK, Jiang H, Li Z, McClure G, McMullen DF, Nanduri B, Perkins A, ... ... Salem S, et al. Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm. Biodata Mining. 8: 7. PMID 25670967 DOI: 10.1186/S13040-015-0037-5  0.306
2015 Goparaju A, Brazier T, Salem S. Mining representative maximal dense cohesive subnetworks Network Modeling Analysis in Health Informatics and Bioinformatics. 4. DOI: 10.1007/S13721-015-0101-6  0.502
2014 Salem S, Ozcaglar C. Hybrid coexpression link similarity graph clustering for mining biological modules from multiple gene expression datasets. Biodata Mining. 7: 16. PMID 25221624 DOI: 10.1186/1756-0381-7-16  0.327
2013 Alroobi R, Ahmed S, Salem S. Mining maximal cohesive induced subnetworks and patterns by integrating biological networks with gene profile data. Interdisciplinary Sciences, Computational Life Sciences. 5: 211-24. PMID 24307412 DOI: 10.1007/S12539-013-0168-7  0.405
2013 Kahveci T, Salem S, Koyuturk M. Guest editorial for special section on BIOKDD Ieee/Acm Transactions On Computational Biology and Bioinformatics. 10: 1199-1200. DOI: 10.1109/Tcbb.2013.184  0.345
2012 Ramakrishnan V, Srinivasan SP, Salem SM, Matthews SJ, Colón W, Zaki M, Bystroff C. Geofold: topology-based protein unfolding pathways capture the effects of engineered disulfides on kinetic stability. Proteins. 80: 920-34. PMID 22189917 DOI: 10.1002/Prot.23249  0.476
2011 Hasan MA, Salem S, Zaki MJ. SimClus: An effective algorithm for clustering with a lower bound on similarity Knowledge and Information Systems. 28: 665-685. DOI: 10.1007/s10115-010-0360-6  0.619
2010 Salem S, Zaki MJ, Bystroff C. FlexSnap: flexible non-sequential protein structure alignment. Algorithms For Molecular Biology : Amb. 5: 12. PMID 20047669 DOI: 10.1186/1748-7188-5-12  0.587
2009 Qureshi AH, Chaoji V, Maiguel D, Faridi MH, Barth CJ, Salem SM, Singhal M, Stoub D, Krastins B, Ogihara M, Zaki MJ, Gupta V. Proteomic and phospho-proteomic profile of human platelets in basal, resting state: insights into integrin signaling. Plos One. 4: e7627. PMID 19859549 DOI: 10.1371/Journal.Pone.0007627  0.716
2009 Salem S, Zaki MJ, Bystroff C. Iterative non-sequential protein structural alignment. Journal of Bioinformatics and Computational Biology. 7: 571-96. PMID 19507290 DOI: 10.1142/S0219720009004205  0.6
2009 Hasan MA, Chaoji V, Salem S, Zaki MJ. Robust partitional clustering by outlier and density insensitive seeding Pattern Recognition Letters. 30: 994-1002. DOI: 10.1016/J.Patrec.2009.04.013  0.756
2009 Chaoji V, Al Hasan M, Salem S, Zaki MJ. SPARCL: An effective and efficient algorithm for mining arbitrary shape-based clusters Knowledge and Information Systems. 21: 201-229. DOI: 10.1007/S10115-009-0216-0  0.778
2009 Hasan MA, Salem S, Pupacdi B, Zaki MJ. Clustering with lower bound on similarity Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5476: 122-133. DOI: 10.1007/978-3-642-01307-2_14  0.609
2008 Salem S, Zaki MJ. Iterative non-sequential protein structural alignment. Computational Systems Bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference. 7: 183-94. PMID 19642279  0.559
2008 Chaoji V, Al Hasan M, Salem S, Zaki MJ. SPARCL: Efficient and effective shape-based clustering Proceedings - Ieee International Conference On Data Mining, Icdm. 93-102. DOI: 10.1109/ICDM.2008.73  0.777
2008 Chaoji V, Al Hasan M, Salem S, Zaki MJ. An integrated, generic approach to pattern mining: Data mining template library Data Mining and Knowledge Discovery. 17: 457-495. DOI: 10.1007/S10618-008-0098-X  0.785
2008 Chaoji V, Hasan MA, Salem S, Besson J, Zaki MJ. ORIGAMI: A novel and effective approach for mining representative orthogonal graph patterns Statistical Analysis and Data Mining. 1: 67-84. DOI: 10.1002/Sam.V1:2  0.78
2007 Hasan MA, Chaoji V, Salem S, Besson J, Zaki MJ. ORIGAMI: Mining representative orthogonal graph patterns Proceedings - Ieee International Conference On Data Mining, Icdm. 153-162. DOI: 10.1109/ICDM.2007.45  0.788
2005 Zaki MJ, Parimi N, De N, Gao F, Phoophakdee B, Urban J, Chaoji V, Al Hasan M, Salem S. Towards generic pattern mining Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science). 3403: 1-20. DOI: 10.1007/11590316_12  0.761
2005 Zaki MJ, Parimi N, De N, Gao F, Phoophakdee B, Urban J, Chaoji V, Al Hasan M, Salem S. Towards generic pattern mining Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science). 3403: 1-20.  0.724
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