| Year |
Citation |
Score |
| 2023 |
Mao R, Dorfman KD. Diffusion of knots in nanochannel-confined DNA molecules. The Journal of Chemical Physics. 158. PMID 37184024 DOI: 10.1063/5.0151025 |
0.363 |
|
| 2022 |
Frykholm K, Müller V, Sriram KK, Dorfman KD, Westerlund F. DNA in Nanochannels - Theory and Applications. Quarterly Reviews of Biophysics. 1-83. PMID 36203227 DOI: 10.1017/S0033583522000117 |
0.302 |
|
| 2021 |
Ma Z, Dorfman KD. Interactions between two knots in nanochannel-confined DNA molecules. The Journal of Chemical Physics. 155: 154901. PMID 34686050 DOI: 10.1063/5.0067076 |
0.379 |
|
| 2021 |
Case LJ, Delaney KT, Fredrickson GH, Bates FS, Dorfman KD. Open-source platform for block polymer formulation design using particle swarm optimization. The European Physical Journal. E, Soft Matter. 44: 115. PMID 34532757 DOI: 10.1140/epje/s10189-021-00123-9 |
0.418 |
|
| 2021 |
Thomas MS, Adrahtas DZ, Frisbie CD, Dorfman KD. Modeling of Quasi-Static Floating-Gate Transistor Biosensors. Acs Sensors. PMID 33886283 DOI: 10.1021/acssensors.1c00261 |
0.523 |
|
| 2020 |
Radlauer MR, Arora A, Matta ME, Bates FS, Dorfman KD, Hillmyer MA. Order and Disorder in ABCA' Tetrablock Terpolymers. The Journal of Physical Chemistry. B. PMID 33136393 DOI: 10.1021/acs.jpcb.0c07543 |
0.587 |
|
| 2020 |
Agrawal P, Reifenberger JG, Dorfman KD. 3D Printing-Enabled DNA Extraction for Long-Read Genomics. Acs Omega. 5: 20817-20824. PMID 32875216 DOI: 10.1021/acsomega.0c01912 |
0.647 |
|
| 2020 |
Cheong GK, Bates FS, Dorfman KD. Symmetry breaking in particle-forming diblock polymer/homopolymer blends. Proceedings of the National Academy of Sciences of the United States of America. PMID 32636255 DOI: 10.1073/Pnas.2006079117 |
0.78 |
|
| 2020 |
Cheong GK, Chawla A, Morse DC, Dorfman KD. Open-source code for self-consistent field theory calculations of block polymer phase behavior on graphics processing units. The European Physical Journal. E, Soft Matter. 43: 15. PMID 32086593 DOI: 10.1140/Epje/I2020-11938-Y |
0.783 |
|
| 2020 |
Bhandari AB, Dorfman KD. Limitations of the equivalent neutral polymer assumption for theories describing nanochannel-confined DNA. Physical Review. E. 101: 012501. PMID 32069627 DOI: 10.1103/Physreve.101.012501 |
0.839 |
|
| 2020 |
Dorfman KD, Adrahtas DZ, Thomas MS, Frisbie CD. Microfluidic opportunities in printed electrolyte-gated transistor biosensors. Biomicrofluidics. 14: 011301. PMID 32002104 DOI: 10.1063/1.5131365 |
0.538 |
|
| 2020 |
Sethuraman V, Dorfman KD. Origins of the suppression of fibril formation in grafted methylcellulose solutions Physical Review Materials. 4. DOI: 10.1103/Physrevmaterials.4.085601 |
0.716 |
|
| 2020 |
Ma Z, Dorfman KD. Diffusion of Knots along DNA Confined in Nanochannels Macromolecules. 53: 6461-6468. DOI: 10.1021/Acs.Macromol.0C00561 |
0.414 |
|
| 2019 |
Chuang HM, Reifenberger JG, Bhandari AB, Dorfman KD. Extension distribution for DNA confined in a nanochannel near the Odijk regime. The Journal of Chemical Physics. 151: 114903. PMID 31542006 DOI: 10.1063/1.5121305 |
0.839 |
|
| 2019 |
Feng B, Sosa RP, Mårtensson AKF, Jiang K, Tong A, Dorfman KD, Takahashi M, Lincoln P, Bustamante CJ, Westerlund F, Nordén B. Hydrophobic catalysis and a potential biological role of DNA unstacking induced by environment effects. Proceedings of the National Academy of Sciences of the United States of America. PMID 31413203 DOI: 10.1073/Pnas.1909122116 |
0.463 |
|
| 2019 |
Bhandari AB, Dorfman KD. Simulations corroborate telegraph model predictions for the extension distributions of nanochannel confined DNA. Biomicrofluidics. 13: 044110. PMID 31406555 DOI: 10.1063/1.5109566 |
0.821 |
|
| 2019 |
Sethuraman V, McGovern M, Morse DC, Dorfman KD. Influence of charge sequence on the adsorption of polyelectrolytes to oppositely-charged polyelectrolyte brushes. Soft Matter. PMID 31209453 DOI: 10.1039/C9Sm00581A |
0.777 |
|
| 2019 |
Bhandari AB, Reifenberger JG, Chuang HM, Cao H, Dorfman KD. Erratum: "Measuring the wall depletion length of nanoconfined DNA" [J. Chem. Phys. 149, 104901 (2018)]. The Journal of Chemical Physics. 150: 219901. PMID 31176330 DOI: 10.1063/1.5108718 |
0.823 |
|
| 2019 |
Sethuraman V, Dorfman KD. Simulating precursor steps for fibril formation in methylcellulose solutions Physical Review Materials. 3. DOI: 10.1103/Physrevmaterials.3.055601 |
0.731 |
|
| 2019 |
Thomas MS, Dorfman KD, Frisbie CD. Detection and amplification of capacitance- and charge-based signals using printed electrolyte gated transistors with floating gates Flexible and Printed Electronics. 4: 044001. DOI: 10.1088/2058-8585/ab4dcf |
0.491 |
|
| 2019 |
Jiang K, Rocha S, Westling A, Sriram K, Dorfman KD, Wittung-Stafshede P, Westerlund F. Alpha-Synuclein Binds to DNA and Modulates its Physical Properties Biophysical Journal. 116: 506a. DOI: 10.1016/J.Bpj.2018.11.2727 |
0.317 |
|
| 2018 |
Agrawal P, Dorfman KD. Microfluidic long DNA sample preparation from cells. Lab On a Chip. PMID 30534775 DOI: 10.1039/C8Lc01163J |
0.679 |
|
| 2018 |
Lewis RM, Arora A, Beech HK, Lee B, Lindsay AP, Lodge TP, Dorfman KD, Bates FS. Role of Chain Length in the Formation of Frank-Kasper Phases in Diblock Copolymers. Physical Review Letters. 121: 208002. PMID 30500248 DOI: 10.1103/Physrevlett.121.208002 |
0.587 |
|
| 2018 |
Yu S, Sheats J, Cicuta P, Sclavi B, Cosentino Lagomarsino M, Dorfman KD. Subdiffusion of loci and cytoplasmic particles are different in compressed cells. Communications Biology. 1: 176. PMID 30374466 DOI: 10.1038/s42003-018-0185-5 |
0.8 |
|
| 2018 |
Reddy A, Buckley MB, Arora A, Bates FS, Dorfman KD, Grason GM. Stable Frank-Kasper phases of self-assembled, soft matter spheres. Proceedings of the National Academy of Sciences of the United States of America. PMID 30249659 DOI: 10.1073/Pnas.1809655115 |
0.609 |
|
| 2018 |
Bhandari AB, Reifenberger JG, Chuang HM, Cao H, Dorfman KD. Measuring the wall depletion length of nanoconfined DNA. The Journal of Chemical Physics. 149: 104901. PMID 30219022 DOI: 10.1063/1.5040458 |
0.838 |
|
| 2018 |
Jiang K, Rocha S, Westling A, Kk S, Dorfman K, Wittung-Stafshede P, Westerlund F. Alpha-synuclein modulates the physical properties of DNA. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 30102440 DOI: 10.1002/Chem.201803933 |
0.436 |
|
| 2018 |
Ödman D, Werner E, Dorfman KD, Doering CR, Mehlig B. Distribution of label spacings for genome mapping in nanochannels. Biomicrofluidics. 12: 034115. PMID 30018694 DOI: 10.1063/1.5038417 |
0.393 |
|
| 2018 |
Gupta D, Bhandari AB, Dorfman KD. Evaluation of Blob Theory for the Diffusion of DNA in Nanochannels. Macromolecules. 51: 1748-1755. PMID 29599567 DOI: 10.1021/Acs.Macromol.7B02270 |
0.815 |
|
| 2018 |
Werner E, Jain A, Muralidhar A, Frykholm K, St Clere Smithe T, Fritzsche J, Westerlund F, Dorfman KD, Mehlig B. Hairpins in the conformations of a confined polymer. Biomicrofluidics. 12: 024105. PMID 29576836 DOI: 10.1063/1.5018787 |
0.774 |
|
| 2018 |
Thomas MS, White SP, Dorfman KD, Frisbie CD. Interfacial Charge Contributions to Chemical Sensing by Electrolyte-Gated Transistors with Floating Gates. The Journal of Physical Chemistry Letters. 1335-1339. PMID 29509017 DOI: 10.1021/Acs.Jpclett.8B00285 |
0.586 |
|
| 2018 |
Cheong GK, Li X, Dorfman KD. Evidence for the extended de Gennes regime of a semiflexible polymer in slit confinement. Physical Review. E. 97. PMID 29479576 DOI: 10.1103/Physreve.97.022502 |
0.8 |
|
| 2018 |
Reifenberger JG, Cao H, Dorfman KD. Odijk excluded volume interactions during the unfolding of DNA confined in a nanochannel. Macromolecules. 51: 1172-1180. PMID 29479117 DOI: 10.1021/Acs.Macromol.7B02466 |
0.511 |
|
| 2018 |
Agrawal P, Bognár Z, Dorfman KD. Entropic trap purification of long DNA. Lab On a Chip. PMID 29469139 DOI: 10.1039/C7Lc01355H |
0.82 |
|
| 2018 |
Kim K, Arora A, Lewis RM, Liu M, Li W, Shi AC, Dorfman KD, Bates FS. Origins of low-symmetry phases in asymmetric diblock copolymer melts. Proceedings of the National Academy of Sciences of the United States of America. PMID 29348199 DOI: 10.1073/Pnas.1717850115 |
0.604 |
|
| 2018 |
Shin S, Dorfman KD, Cheng X. Effect of edge disturbance on shear banding in polymeric solutions Journal of Rheology. 62: 1339-1345. DOI: 10.1122/1.5042108 |
0.338 |
|
| 2018 |
Arora A, Pillai N, Bates FS, Dorfman KD. Predicting the phase behavior of ABAC tetrablock terpolymers: Sensitivity to Flory–Huggins interaction parameters Polymer. 154: 305-314. DOI: 10.1016/J.Polymer.2018.08.070 |
0.338 |
|
| 2017 |
Shin S, Dorfman KD, Cheng X. Shear-banding and superdiffusivity in entangled polymer solutions. Physical Review. E. 96: 062503. PMID 29347293 DOI: 10.1103/Physreve.96.062503 |
0.654 |
|
| 2017 |
Werner E, Cheong GK, Gupta D, Dorfman KD, Mehlig B. One-Parameter Scaling Theory for DNA Extension in a Nanochannel. Physical Review Letters. 119: 268102. PMID 29328690 DOI: 10.1103/Physrevlett.119.268102 |
0.836 |
|
| 2017 |
Chuang HM, Reifenberger JG, Cao H, Dorfman KD. Sequence-Dependent Persistence Length of Long DNA. Physical Review Letters. 119: 227802. PMID 29286779 DOI: 10.1103/Physrevlett.119.227802 |
0.767 |
|
| 2017 |
Dorfman KD. The statistical segment length of DNA: Opportunities for biomechanical modeling in polymer physics and next-generation genomics. Journal of Biomechanical Engineering. PMID 28857114 DOI: 10.1115/1.4037790 |
0.482 |
|
| 2017 |
Jain A, Dorfman KD. Simulations of knotting of DNA during genome mapping. Biomicrofluidics. 11: 024117. PMID 28798853 DOI: 10.1063/1.4979605 |
0.803 |
|
| 2017 |
Reinhart WF, Reifenberger JG, Gupta D, Muralidhar A, Sheats J, Cao H, Dorfman KD. Erratum: "Distribution of distances between DNA barcode labels in nanochannels close to the persistence length" [J. Chem. Phys. 142, 064902 (2015)]. The Journal of Chemical Physics. 147: 029901. PMID 28711044 DOI: 10.1063/1.4993458 |
0.814 |
|
| 2017 |
Sheats J, Sclavi B, Cosentino Lagomarsino M, Cicuta P, Dorfman KD. Role of growth rate on the orientational alignment of Escherichia coli in a slit. Royal Society Open Science. 4: 170463. PMID 28680690 DOI: 10.1098/Rsos.170463 |
0.775 |
|
| 2017 |
Arora A, Morse DC, Bates FS, Dorfman KD. Accelerating self-consistent field theory of block polymers in a variable unit cell. The Journal of Chemical Physics. 146: 244902. PMID 28668028 DOI: 10.1063/1.4986643 |
0.6 |
|
| 2017 |
Kim K, Schulze MW, Arora A, Lewis RM, Hillmyer MA, Dorfman KD, Bates FS. Thermal processing of diblock copolymer melts mimics metallurgy. Science (New York, N.Y.). 356: 520-523. PMID 28473585 DOI: 10.1126/Science.Aam7212 |
0.596 |
|
| 2017 |
Laaser JE, McGovern M, Jiang Y, Lohmann E, Reineke TM, Morse DC, Dorfman KD, Lodge TP. Equilibration of Micelle-Polyelectrolyte Complexes: Mechanistic Differences between Static and Annealed Charge Distributions. The Journal of Physical Chemistry. B. PMID 28441017 DOI: 10.1021/Acs.Jpcb.7B01953 |
0.708 |
|
| 2017 |
Cheong GK, Li X, Dorfman KD. Wall depletion length of a channel-confined polymer. Physical Review. E. 95: 022501. PMID 28297899 DOI: 10.1103/Physreve.95.022501 |
0.824 |
|
| 2017 |
Li X, Bates FS, Dorfman KD. Rapid conformational fluctuations in a model of methylcellulose Physical Review Materials. 1. DOI: 10.1103/Physrevmaterials.1.025604 |
0.508 |
|
| 2016 |
Muralidhar A, Quevillon MJ, Dorfman KD. The Backfolded Odijk Regime for Wormlike Chains Confined in Rectangular Nanochannels. Polymers. 8. PMID 30979173 DOI: 10.3390/Polym8030079 |
0.761 |
|
| 2016 |
Jain A, Sheats J, Reifenberger JG, Cao H, Dorfman KD. Modeling the relaxation of internal DNA segments during genome mapping in nanochannels. Biomicrofluidics. 10: 054117. PMID 27795749 DOI: 10.1063/1.4964927 |
0.835 |
|
| 2016 |
McGovern M, Dorfman KD, Morse DC. Particle-directed assembly of semiflexible polymer chains. Soft Matter. PMID 27378073 DOI: 10.1039/C6Sm00785F |
0.724 |
|
| 2016 |
Chanpuriya S, Kim K, Zhang J, Lee S, Arora A, Dorfman KD, Delaney KT, Fredrickson GH, Bates FS. A Cornucopia of Nanoscale Ordered Phases in Sphere Forming Tetrablock Terpolymers. Acs Nano. PMID 27055118 DOI: 10.1021/Acsnano.6B00495 |
0.678 |
|
| 2016 |
Agrawal P, Ingle NP, Boyle WS, Ward E, Tolar J, Dorfman KD, Reineke TM. Fast, Efficient, and Gentle Transfection of Human Adherent Cells in Suspension. Acs Applied Materials & Interfaces. PMID 27035392 DOI: 10.1021/Acsami.6B01702 |
0.753 |
|
| 2016 |
Li X, Dorfman KD. Effect of excluded volume on the force-extension of wormlike chains in slit confinement. The Journal of Chemical Physics. 144: 104902. PMID 26979704 DOI: 10.1063/1.4943195 |
0.572 |
|
| 2016 |
Arora A, Qin J, Morse DC, Delaney KT, Fredrickson GH, Bates FS, Dorfman KD. Broadly Accessible Self-Consistent Field Theory for Block Polymer Materials Discovery Macromolecules. 49: 4675-4690. DOI: 10.1021/Acs.Macromol.6B00107 |
0.514 |
|
| 2016 |
Muralidhar A, Dorfman KD. Backfolding of DNA Confined in Nanotubes: Flory Theory versus the Two-State Cooperativity Model Macromolecules. 49: 1120-1126. DOI: 10.1021/Acs.Macromol.5B02556 |
0.766 |
|
| 2015 |
Dutta S, Dorfman KD, Kumar S. Shear-Induced Desorption of Isolated Polymer Molecules from a Planar Wall. Acs Macro Letters. 4: 271-274. PMID 35596341 DOI: 10.1021/mz500806j |
0.59 |
|
| 2015 |
Smithe TS, Iarko V, Muralidhar A, Werner E, Dorfman KD, Mehlig B. Finite-size corrections for confined polymers in the extended de Gennes regime. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 92: 062601. PMID 26764718 DOI: 10.1103/Physreve.92.062601 |
0.799 |
|
| 2015 |
Sheats J, Reifenberger JG, Cao H, Dorfman KD. Measurements of DNA barcode label separations in nanochannels from time-series data. Biomicrofluidics. 9: 064119. PMID 26759636 DOI: 10.1063/1.4938732 |
0.816 |
|
| 2015 |
Gupta D, Miller JJ, Muralidhar A, Mahshid S, Reisner W, Dorfman KD. Experimental evidence of weak excluded volume effects for nanochannel confined DNA. Acs Macro Letters. 4: 759-763. PMID 26664782 DOI: 10.1021/Acsmacrolett.5B00340 |
0.826 |
|
| 2015 |
Muralidhar A, Dorfman KD. Kirkwood diffusivity of long semiflexible chains in nanochannel confinement. Macromolecules. 48: 2829-2839. PMID 26166846 DOI: 10.1021/Acs.Macromol.5B00377 |
0.772 |
|
| 2015 |
Li X, Schroeder CM, Dorfman KD. Modeling the stretching of wormlike chains in the presence of excluded volume. Soft Matter. 11: 5947-54. PMID 26123827 DOI: 10.1039/C5Sm01333J |
0.551 |
|
| 2015 |
Arora A, Morse DC, Bates FS, Dorfman KD. Commensurability and finite size effects in lattice simulations of diblock copolymers. Soft Matter. 11: 4862-7. PMID 25994841 DOI: 10.1039/C5Sm00838G |
0.617 |
|
| 2015 |
Reifenberger JG, Dorfman KD, Cao H. Topological events in single molecules of E. coli DNA confined in nanochannels. The Analyst. 140: 4887-94. PMID 25991508 DOI: 10.1039/C5An00343A |
0.451 |
|
| 2015 |
Jain A, Dorfman KD. Evaluation of the Kirkwood approximation for the diffusivity of channel-confined DNA chains in the de Gennes regime. Biomicrofluidics. 9: 024112. PMID 25945138 DOI: 10.1063/1.4917269 |
0.769 |
|
| 2015 |
Reinhart WF, Reifenberger JG, Gupta D, Muralidhar A, Sheats J, Cao H, Dorfman KD. Distribution of distances between DNA barcode labels in nanochannels close to the persistence length. The Journal of Chemical Physics. 142: 064902. PMID 25681938 DOI: 10.1063/1.4907552 |
0.82 |
|
| 2015 |
White SP, Dorfman KD, Frisbie CD. Label-free DNA sensing platform with low-voltage electrolyte-gated transistors. Analytical Chemistry. 87: 1861-6. PMID 25569583 DOI: 10.1021/Ac503914X |
0.414 |
|
| 2015 |
Reinhart WF, Reifenberger JG, Gupta D, Muralidhar A, Sheats J, Cao H, Dorfman KD. Distribution of distances between DNA barcode labels in nanochannels close to the persistence length Journal of Chemical Physics. 142. DOI: 10.1063/1.4907552 |
0.814 |
|
| 2015 |
Li X, Schroeder CM, Dorfman KD. Modeling the stretching of wormlike chains in the presence of excluded volume Soft Matter. 11: 5947-5954. DOI: 10.1039/c5sm01333j |
0.477 |
|
| 2015 |
Dutta S, Dorfman KD, Kumar S. Shear-Induced Desorption of Isolated Polymer Molecules from a Planar Wall Acs Macro Letters. 4: 271-274. DOI: 10.1021/Mz500806J |
0.591 |
|
| 2015 |
Gupta D, Miller JJ, Muralidhar A, Mahshid S, Reisner W, Dorfman KD. Experimental Evidence of Weak Excluded Volume Effects for Nanochannel Confined DNA Acs Macro Letters. 4: 759-763. DOI: 10.1021/acsmacrolett.5b00340 |
0.825 |
|
| 2015 |
Muralidhar A, Dorfman KD. Kirkwood diffusivity of long semiflexible chains in nanochannel confinement Macromolecules. 48: 2829-2839. DOI: 10.1021/acs.macromol.5b00377 |
0.693 |
|
| 2014 |
Dorfman KD, Gupta D, Jain A, Muralidhar A, Tree DR. Hydrodynamics of DNA confined in nanoslits and nanochannels. The European Physical Journal. Special Topics. 223: 3179-3200. PMID 25566349 DOI: 10.1140/Epjst/E2014-02326-4 |
0.83 |
|
| 2014 |
Thomas JD, Dorfman KD. Tilted post arrays for separating long DNA. Biomicrofluidics. 8: 034115. PMID 25379075 DOI: 10.1063/1.4884521 |
0.648 |
|
| 2014 |
Long Z, Olliver A, Brambilla E, Sclavi B, Lagomarsino MC, Dorfman KD. Measuring bacterial adaptation dynamics at the single-cell level using a microfluidic chemostat and time-lapse fluorescence microscopy. The Analyst. 139: 5254-62. PMID 25137302 DOI: 10.1039/C4An00877D |
0.733 |
|
| 2014 |
Gupta D, Sheats J, Muralidhar A, Miller JJ, Huang DE, Mahshid S, Dorfman KD, Reisner W. Mixed confinement regimes during equilibrium confinement spectroscopy of DNA Journal of Chemical Physics. 140. PMID 24908035 DOI: 10.1063/1.4879515 |
0.807 |
|
| 2014 |
Javer A, Kuwada NJ, Long Z, Benza VG, Dorfman KD, Wiggins PA, Cicuta P, Lagomarsino MC. Persistent super-diffusive motion of Escherichia coli chromosomal loci. Nature Communications. 5: 3854. PMID 24874970 DOI: 10.1038/Ncomms4854 |
0.728 |
|
| 2014 |
Muralidhar A, Tree DR, Wang Y, Dorfman KD. Interplay between chain stiffness and excluded volume of semiflexible polymers confined in nanochannels. The Journal of Chemical Physics. 140: 084905. PMID 24588196 DOI: 10.1063/1.4865965 |
0.82 |
|
| 2014 |
Chen Z, Dorfman KD. Comparison of microfabricated hexagonal and lamellar post arrays for DNA electrophoresis. Electrophoresis. 35: 654-61. PMID 24132597 DOI: 10.1002/Elps.201300381 |
0.555 |
|
| 2014 |
Chen Z, Dorfman KD. Tilted hexagonal post arrays: DNA electrophoresis in anisotropic media. Electrophoresis. 35: 405-11. PMID 23868490 DOI: 10.1002/Elps.201300191 |
0.534 |
|
| 2014 |
Muralidhar A, Tree DR, Dorfman KD. Backfolding of wormlike chains confined in nanochannels Macromolecules. 47: 8446-8458. DOI: 10.1021/Ma501687K |
0.802 |
|
| 2014 |
Tree DR, Reinhart WF, Dorfman KD. The odijk regime in slits Macromolecules. 47: 3672-3684. DOI: 10.1021/Ma500647V |
0.633 |
|
| 2014 |
Chen Z, Dorfman KD. Comparison of microfabricated hexagonal and lamellar post arrays for DNA electrophoresis Electrophoresis. 35: 654-661. DOI: 10.1002/elps.201300381 |
0.344 |
|
| 2014 |
Chen Z, Dorfman KD. Tilted hexagonal post arrays: DNA electrophoresis in anisotropic media Electrophoresis. 35: 405-411. DOI: 10.1002/elps.201300191 |
0.32 |
|
| 2013 |
Tree DR, Wang Y, Dorfman KD. Extension of DNA in a nanochannel as a rod-to-coil transition. Physical Review Letters. 110: 208103. PMID 25167455 DOI: 10.1103/Physrevlett.110.208103 |
0.807 |
|
| 2013 |
Tree DR, Muralidhar A, Doyle PS, Dorfman KD. Is DNA a Good Model Polymer? Macromolecules. 46. PMID 24347685 DOI: 10.1021/Ma401507F |
0.838 |
|
| 2013 |
Tree DR, Wang Y, Dorfman KD. Modeling the relaxation time of DNA confined in a nanochannel. Biomicrofluidics. 7: 54118. PMID 24309551 DOI: 10.1063/1.4826156 |
0.8 |
|
| 2013 |
Reinhart WF, Tree DR, Dorfman KD. Entropic depletion of DNA in triangular nanochannels. Biomicrofluidics. 7: 24102. PMID 24309518 DOI: 10.1063/1.4794371 |
0.713 |
|
| 2013 |
Dutta S, Dorfman KD, Kumar S. Dynamics of polymer adsorption from dilute solution in shear flow near a planar wall. The Journal of Chemical Physics. 139: 174905. PMID 24206332 DOI: 10.1063/1.4827255 |
0.618 |
|
| 2013 |
Thomas JD, Joswiak MN, Olson DW, Park SG, Dorfman KD. Ratchet nanofiltration of DNA. Lab On a Chip. 13: 3741-6. PMID 23896739 DOI: 10.1039/C3Lc50496D |
0.764 |
|
| 2013 |
King SB, Dorfman KD. Role of order during Ogston sieving of DNA in colloidal crystals. Analytical Chemistry. 85: 7769-76. PMID 23855831 DOI: 10.1021/Ac4010327 |
0.717 |
|
| 2013 |
Javer A, Long Z, Nugent E, Grisi M, Siriwatwetchakul K, Dorfman KD, Cicuta P, Lagomarsino MC. Short-time movement of E. coli chromosomal loci depends on coordinate and subcellular localization Nature Communications. 4. PMID 23764719 DOI: 10.1038/Ncomms3003 |
0.737 |
|
| 2013 |
Dai L, Tree DR, van der Maarel JR, Dorfman KD, Doyle PS. Revisiting blob theory for DNA diffusivity in slitlike confinement. Physical Review Letters. 110: 168105. PMID 23679643 DOI: 10.1103/Physrevlett.110.168105 |
0.696 |
|
| 2013 |
Dorfman KD. The Fluid Mechanics of Genome Mapping. Aiche Journal. American Institute of Chemical Engineers. 59: 346-354. PMID 23641116 DOI: 10.1002/Aic.14002 |
0.312 |
|
| 2013 |
Chen Z, Dorfman KD. Relationship between frequency and deflection angle in the DNA prism. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 87: 012723. PMID 23410375 DOI: 10.1103/Physreve.87.012723 |
0.501 |
|
| 2013 |
Dutta S, Dorfman KD, Kumar S. Adsorption of single polymer molecules in shear flow near a planar wall Journal of Chemical Physics. 138. PMID 23343303 DOI: 10.1063/1.4773859 |
0.607 |
|
| 2013 |
Long Z, Nugent E, Javer A, Cicuta P, Sclavi B, Cosentino Lagomarsino M, Dorfman KD. Microfluidic chemostat for measuring single cell dynamics in bacteria Lab On a Chip - Miniaturisation For Chemistry and Biology. 13: 947-954. PMID 23334753 DOI: 10.1039/C2Lc41196B |
0.749 |
|
| 2013 |
Dorfman KD, King SB, Olson DW, Thomas JD, Tree DR. Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching. Chemical Reviews. 113: 2584-667. PMID 23140825 DOI: 10.1021/Cr3002142 |
0.81 |
|
| 2013 |
Dutta S, Dorfman KD, Kumar S. Dynamics of polymer adsorption from dilute solution in shear flow near a planar wall Journal of Chemical Physics. 139. DOI: 10.1063/1.4827255 |
0.548 |
|
| 2012 |
Olson DW, Dorfman KD. Experimental study of the effect of disorder on DNA dynamics in post arrays during electrophoresis. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 041909. PMID 23214617 DOI: 10.1103/Physreve.86.041909 |
0.693 |
|
| 2012 |
Tree DR, Wang Y, Dorfman KD. Mobility of a semiflexible chain confined in a nanochannel. Physical Review Letters. 108: 228105. PMID 23003659 DOI: 10.1103/Physrevlett.108.228105 |
0.775 |
|
| 2012 |
Benza VG, Bassetti B, Dorfman KD, Scolari VF, Bromek K, Cicuta P, Lagomarsino MC. Physical descriptions of the bacterial nucleoid at large scales, and their biological implications Reports On Progress in Physics. 75. PMID 22790781 DOI: 10.1088/0034-4885/75/7/076602 |
0.341 |
|
| 2012 |
Joswiak MN, Ou J, Dorfman KD. Statistical properties of the electrophoretic collision of a long DNA molecule with a small obstacle Electrophoresis. 33: 1013-1020. PMID 22528421 DOI: 10.1002/Elps.201100471 |
0.818 |
|
| 2012 |
Park SG, Olson DW, Dorfman KD. DNA electrophoresis in a nanofence array. Lab On a Chip. 12: 1463-70. PMID 22388662 DOI: 10.1039/C2Lc00016D |
0.691 |
|
| 2012 |
Wang Y, Reinhart WF, Tree DR, Dorfman KD. Resolution limit for DNA barcodes in the Odijk regime. Biomicrofluidics. 6: 14101-141019. PMID 22299023 DOI: 10.1063/1.3672691 |
0.817 |
|
| 2012 |
Tree DR, Wang Y, Dorfman KD. Mobility of a semiflexible chain confined in a nanochannel Physical Review Letters. 108. DOI: 10.1103/PhysRevLett.108.228105 |
0.653 |
|
| 2012 |
Olson DW, Dorfman KD. Experimental study of the effect of disorder on DNA dynamics in post arrays during electrophoresis Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 86. DOI: 10.1103/PhysRevE.86.041909 |
0.645 |
|
| 2012 |
Linak MC, Tourdot R, Dorfman KD. Erratum: “Moving beyond Watson–Crick models of coarse grained DNA dynamics” [J. Chem. Phys. 135, 205102 (2011)] The Journal of Chemical Physics. 137: 049902. DOI: 10.1063/1.4739534 |
0.816 |
|
| 2012 |
Cho J, Dorfman KD. Erratum to “Brownian dynamics simulations of electrophoretic DNA separations in a sparse ordered post array” [J. Chromatogr. A 1217 (2010) 5522–5528] Journal of Chromatography A. 1252: 189. DOI: 10.1016/J.Chroma.2012.06.077 |
0.663 |
|
| 2011 |
Linak MC, Tourdot R, Dorfman KD. Moving beyond Watson-Crick models of coarse grained DNA dynamics Journal of Chemical Physics. 135. PMID 22128958 DOI: 10.1063/1.3662137 |
0.826 |
|
| 2011 |
Wang Y, Tree DR, Dorfman KD. Simulation of DNA Extension in Nanochannels. Macromolecules. 44: 6594-6604. PMID 21860535 DOI: 10.1021/Ma201277E |
0.804 |
|
| 2011 |
Olson DW, Ou J, Tian M, Dorfman KD. Continuous-time random walk models of DNA electrophoresis in a post array: part I. Evaluation of existing models. Electrophoresis. 32: 573-80. PMID 21298673 DOI: 10.1002/Elps.201000466 |
0.827 |
|
| 2011 |
Olson DW, Dutta S, Laachi N, Tian M, Dorfman KD. Continuous-time random walk models of DNA electrophoresis in a post array: part II. Mobility and sources of band broadening. Electrophoresis. 32: 581-7. PMID 21290387 DOI: 10.1002/Elps.201000467 |
0.819 |
|
| 2011 |
Ou J, Joswiak MN, Carpenter SJ, Dorfman KD. Plasma thinned nanopost arrays for DNA electrophoresis Journal of Vacuum Science and Technology a: Vacuum, Surfaces and Films. 29. DOI: 10.1116/1.3531693 |
0.807 |
|
| 2011 |
Linak MC, Dorfman KD. Erratum: “Analysis of a DNA simulation model through hairpin melting experiments” [J. Chem. Phys. 133, 125101 (2010)] The Journal of Chemical Physics. 135: 029901. DOI: 10.1063/1.3609111 |
0.808 |
|
| 2011 |
Kenward M, Dorfman K. Correction Biophysical Journal. 101: 517. DOI: 10.1016/J.Bpj.2011.06.037 |
0.718 |
|
| 2011 |
Park SG, Dorfman KD. A nanofence array for DNA electrophoresis 15th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2011, Microtas 2011. 3: 2010-2012. |
0.334 |
|
| 2010 |
Laachi N, Dorfman KD. DNA electrophoresis in confined, periodic geometries: A new lakes-straits model Journal of Chemical Physics. 133. PMID 21186855 DOI: 10.1063/1.3516176 |
0.758 |
|
| 2010 |
Araki N, Aydil ES, Dorfman KD. Collision of a long DNA molecule with an isolated nanowire Electrophoresis. 31: 3675-3680. PMID 20967778 DOI: 10.1002/Elps.201000331 |
0.704 |
|
| 2010 |
Linak MC, Dorfman KD. Analysis of a DNA simulation model through hairpin melting experiments Journal of Chemical Physics. 133. PMID 20886965 DOI: 10.1063/1.3480685 |
0.826 |
|
| 2010 |
Cho J, Dorfman KD. Brownian dynamics simulations of electrophoretic DNA separations in a sparse ordered post array Journal of Chromatography A. 1217: 5522-5528. PMID 20650462 DOI: 10.1016/J.Chroma.2010.06.057 |
0.69 |
|
| 2010 |
Ou J, Carpenter SJ, Dorfman KD. Onset of channeling during DNA electrophoresis in a sparse ordered post array. Biomicrofluidics. 4: 13203. PMID 20644666 DOI: 10.1063/1.3283903 |
0.838 |
|
| 2010 |
Foster T, Dorfman KD, Davis HT. Giant biocompatible and biodegradable PEG-PMCL vesicles and microcapsules by solvent evaporation from double emulsion droplets. Journal of Colloid and Interface Science. 351: 140-50. PMID 20627256 DOI: 10.1016/J.Jcis.2010.05.020 |
0.771 |
|
| 2010 |
Foster T, Dorfman KD, Davis HT. Rapid ejection of giant Pluronic L121 vesicles from spreading double emulsion droplets. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 9666-72. PMID 20380397 DOI: 10.1021/La1002429 |
0.76 |
|
| 2010 |
Laachi N, Dorfman KD. Statistics of tethered self-avoiding chains under spherical confinement and an external force Journal of Chemical Physics. 132. PMID 20192291 DOI: 10.1063/1.3330916 |
0.711 |
|
| 2010 |
Cho J, Kumar S, Dorfman KD. Electrophoretic collision of a DNA molecule with a small elliptical obstacle Electrophoresis. 31: 860-867. PMID 20191551 DOI: 10.1002/Elps.200900491 |
0.671 |
|
| 2010 |
Dorfman KD. DNA electrophoresis in microfabricated devices Reviews of Modern Physics. 82: 2903-2947. DOI: 10.1103/Revmodphys.82.2903 |
0.456 |
|
| 2009 |
Kenward M, Dorfman KD. Coarse-grained Brownian dynamics simulations of the 10-23 DNAzyme Biophysical Journal. 97: 2785-2793. PMID 19917233 DOI: 10.1016/J.Bpj.2009.09.003 |
0.771 |
|
| 2009 |
Salieb-Beugelaar GB, Dorfman KD, Van Den Berg A, Eijkel JCT. Electrophoretic separation of DNA in gels and nanostructures Lab On a Chip - Miniaturisation For Chemistry and Biology. 9: 2508-2523. PMID 19680576 DOI: 10.1039/B905448K |
0.441 |
|
| 2009 |
Ou J, Cho J, Olson DW, Dorfman KD. DNA electrophoresis in a sparse ordered post array. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 061904. PMID 19658521 DOI: 10.1103/Physreve.79.061904 |
0.823 |
|
| 2009 |
Laachi N, Cho J, Dorfman KD. DNA unhooking from a single post as a deterministic process: insights from translocation modeling. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 031928. PMID 19391992 DOI: 10.1103/Physreve.79.031928 |
0.819 |
|
| 2009 |
Cho J, Kenward M, Dorfman KD. A boundary element method/Brownian dynamics approach for simulating DNA electrophoresis in electrically insulating microfabricated devices Electrophoresis. 30: 1482-1489. PMID 19350540 DOI: 10.1002/Elps.200800582 |
0.807 |
|
| 2009 |
Kenward M, Dorfman KD. Brownian dynamics simulations of single-stranded DNA hairpins Journal of Chemical Physics. 130. PMID 19275427 DOI: 10.1063/1.3078795 |
0.807 |
|
| 2009 |
Laachi N, Cho J, Dorfman KD. Erratum: DNA unhooking from a single post as a deterministic process: Insights from translocation modeling [Phys. Rev. E79, 031928 (2009)] Physical Review E. 80. DOI: 10.1103/Physreve.80.019903 |
0.798 |
|
| 2009 |
Ou J, Cho J, Olson DW, Dorfman KD. DNA electrophoresis in a sparse ordered post array Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 79. DOI: 10.1103/PhysRevE.79.061904 |
0.817 |
|
| 2009 |
Laachi N, Cho J, Dorfman KD. DNA unhooking from a single post as a deterministic process: Insights from translocation modeling Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 79. DOI: 10.1103/PhysRevE.79.031928 |
0.796 |
|
| 2009 |
Allen JW, Kenward M, Dorfman KD. Coupled flow and reaction during natural convection PCR Microfluidics and Nanofluidics. 6: 121-130. DOI: 10.1007/S10404-008-0312-6 |
0.775 |
|
| 2008 |
Dorfman KD, Brenner H. Comment on "Taylor dispersion with absorbing boundaries: a stochastic approach". Physical Review Letters. 100: 029401; discussion 0. PMID 18232938 DOI: 10.1103/Physrevlett.100.029401 |
0.428 |
|
| 2008 |
Dorfman KD, Brenner H. Comment on âœtaylor dispersion with absorbing boundaries: A stochastic approachâ Physical Review Letters. 100. DOI: 10.1103/PhysRevLett.100.029401 |
0.355 |
|
| 2008 |
Dorfman KD. Erratum: DNA electrophoresis in microfluidic post arrays under moderate electric fields [Phys. Rev. E73, 061922 (2006)] Physical Review E. 77. DOI: 10.1103/Physreve.77.019901 |
0.382 |
|
| 2008 |
Cho J, Dorfman KD. A method for simulating DNA electrophoresis in electrically insulating microfluidic and nanofluidic geometries 12th International Conference On Miniaturized Systems For Chemistry and Life Sciences - the Proceedings of Microtas 2008 Conference. 691-693. |
0.318 |
|
| 2007 |
Laachi N, Declet C, Matson C, Dorfman KD. Nonequilibrium transport of rigid macromolecules in periodically constricted geometries. Physical Review Letters. 98: 098106. PMID 17359203 DOI: 10.1103/Physrevlett.98.098106 |
0.764 |
|
| 2007 |
Laachi N, Dorfman KD. Theory of band broadening during cycling temperature capillary electrophoresis Electrophoresis. 28: 665-673. PMID 17253630 DOI: 10.1002/Elps.200600565 |
0.733 |
|
| 2007 |
Laachi N, Kenward M, Yariv E, Dorfman KD. Force-driven transport through periodic entropy barriers Epl. 80. DOI: 10.1209/0295-5075/80/50009 |
0.786 |
|
| 2007 |
Dorfman KD, Laachi N. Band broadening during high-throughput mutation detection in microchannels Proceedings of the 5th International Conference On Nanochannels, Microchannels and Minichannels, Icnmm2007. 155-162. DOI: 10.1115/ICNMM2007-30051 |
0.619 |
|
| 2007 |
Laachi N, Declet C, Matson C, Dorfman KD. Nonequilibrium transport of rigid macromolecules in periodically constricted geometries Physical Review Letters. 98. DOI: 10.1103/PhysRevLett.98.098106 |
0.638 |
|
| 2007 |
Yariv E, Dorfman KD. Electrophoretic transport through channels of periodically varying cross section Physics of Fluids. 19. DOI: 10.1063/1.2710894 |
0.3 |
|
| 2006 |
Chabert M, Dorfman KD, De Cremoux P, Roeraade J, Viovy JL. Automated microdroplet platform for sample manipulation and polymerase chain reaction Analytical Chemistry. 78: 7722-7728. PMID 17105164 DOI: 10.1021/Ac061205E |
0.512 |
|
| 2006 |
Dorfman KD. DNA electrophoresis in microfluidic post arrays under moderate electric fields. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 061922. PMID 16906879 DOI: 10.1103/Physreve.73.061922 |
0.429 |
|
| 2006 |
Chabert M, Dorfman KD, Viovy JL. Using droplet microfluidics to design a continuous flow PCR system | Application de la microfluidique de gouttes à la conception d'un appareil de PCR en flux continu Houille Blanche. 51-56. DOI: 10.1051/Lhb:2006085 |
0.485 |
|
| 2006 |
Minc N, Slovakova M, Dorfman KD, Fütterer C, Bokov P, Bilkova Z, Smadga C, Taverna M, Viovy JL. Microfluidic systems of self-assembled magnetic particles; application to DNA separation and protein digestion | Systèmes microfluidiques de particules magnétiques auto-assemblées; application à la séparation d'ADN et à la digestion de protéines Houille Blanche. 51-54. |
0.49 |
|
| 2006 |
Chabert M, Dorfman KD, Viovy JL. Automated continuous flow Polymerase Chain Reaction in independent microdroplets Micro Total Analysis Systems - Proceedings of Microtas 2006 Conference: 10th International Conference On Miniaturized Systems For Chemistry and Life Sciences. 1220-1222. |
0.453 |
|
| 2005 |
Chabert M, Dorfman KD, Viovy JL. Droplet fusion by alternating current (AC) field electrocoalescence in microchannels Electrophoresis. 26: 3706-3715. PMID 16136526 DOI: 10.1002/Elps.200500109 |
0.537 |
|
| 2005 |
Minc N, Viovy JL, Dorfman KD. Non-markovian transport of DNA in microfluidic post arrays. Physical Review Letters. 94: 198105. PMID 16090219 DOI: 10.1103/Physrevlett.94.198105 |
0.633 |
|
| 2005 |
Dorfman KD, Chabert M, Codarbox JH, Rousseau G, De Cremoux P, Viovy JL. Contamination-free continuous flow microfluidic polymerase chain reaction for quantitative and clinical applications Analytical Chemistry. 77: 3700-3704. PMID 15924408 DOI: 10.1021/Ac050031I |
0.525 |
|
| 2005 |
Bancaud A, Wagner G, Dorfman KD, Viovy JL. Measurement of the surface concentration for bioassay kinetic in microchannels Analytical Chemistry. 77: 833-839. PMID 15679351 DOI: 10.1021/Ac048996+ |
0.565 |
|
| 2005 |
Minc N, Bokov P, Zeldovich KB, Fütterer C, Viovy JL, Dorfman KD. Motion of single long DNA molecules through arrays of magnetic columns. Electrophoresis. 26: 362-75. PMID 15657884 DOI: 10.1002/Elps.200410115 |
0.656 |
|
| 2005 |
Yariv E, Ben-Dov G, Dorfman KD. Polymerase chain reaction in natural convection systems: A convection-diffusion-reaction model Europhysics Letters. 71: 1008-1014. DOI: 10.1209/Epl/I2005-10171-6 |
0.397 |
|
| 2005 |
Minc N, Viovy JL, Dorfman KD. Non-markovian transport of long DNA in microfabricated arrays Micro Total Analysis Systems - Proceedings of Microtas 2005 Conference: 9th International Conference On Miniaturized Systems For Chemistry and Life Sciences. 1: 1009-1011. |
0.556 |
|
| 2005 |
Chabert M, Dorfman KD, Viovy JL. Contamination-free droplet fusion and continuous flow PCR Micro Total Analysis Systems - Proceedings of Microtas 2005 Conference: 9th International Conference On Miniaturized Systems For Chemistry and Life Sciences. 1: 115-117. |
0.436 |
|
| 2004 |
Dorfman KD, Fulconis R, Dutreix M, Viovy JL. Model of RecA-mediated homologous recognition. Physical Review Letters. 93: 268102. PMID 15698024 DOI: 10.1103/Physrevlett.93.268102 |
0.646 |
|
| 2004 |
Gauthier MG, Slater GW, Dorfman KD. Exact lattice calculations of dispersion coefficients in the presence of external fields and obstacles. The European Physical Journal. E, Soft Matter. 15: 71-82. PMID 15480918 DOI: 10.1140/Epje/I2004-10037-9 |
0.315 |
|
| 2004 |
Minc N, Fütterer C, Dorfman KD, Bancaud A, Gosse C, Goubault C, Viovy JL. Quantitative microfluidic separation of DNA in self-assembled magnetic matrixes. Analytical Chemistry. 76: 3770-6. PMID 15228353 DOI: 10.1021/Ac035246B |
0.643 |
|
| 2004 |
Dorfman KD, Viovy JL. Semiphenomenological model for the dispersion of DNA during electrophoresis in a microfluidic array of posts. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 69: 011901. PMID 14995641 DOI: 10.1103/Physreve.69.011901 |
0.626 |
|
| 2003 |
Dorfman KD, Brenner H. Generalized Taylor-Aris dispersion in spatially periodic microfluidic networks. Chemical reactions Siam Journal On Applied Mathematics. 63: 962-986. DOI: 10.1137/S0036139902401872 |
0.455 |
|
| 2003 |
Dorfman KD. Exact computation of the mean velocity, molecular diffusivity, and dispersivity of a particle moving on a periodic lattice Journal of Chemical Physics. 118: 8428-8436. DOI: 10.1063/1.1565322 |
0.325 |
|
| 2003 |
Dorfman KD, Yariv E, Dill LH, Brenner H. Anomalous sedimentation of a small Brownian sphere in a vertical circular cylinder of periodically varying radius Physics of Fluids. 15: 1082-1085. DOI: 10.1063/1.1555615 |
0.499 |
|
| 2003 |
Dorfman KD, Brenner H. Convective dispersion without molecular diffusion Physica a: Statistical Mechanics and Its Applications. 322: 180-194. DOI: 10.1016/S0378-4371(03)00027-X |
0.482 |
|
| 2002 |
Dorfman KD, Brenner H. Separation mechanisms underlying vector chromatography in microlithographic arrays. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 052103. PMID 12059615 DOI: 10.1103/Physreve.65.052103 |
0.486 |
|
| 2002 |
Dorfman KD, Brenner H. Generalized Taylor-Aris dispersion in discrete spatially periodic networks: microfluidic applications. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 021103. PMID 11863499 DOI: 10.1103/Physreve.65.021103 |
0.501 |
|
| 2002 |
Dorfman KD, Brenner H. Modeling DNA electrophoresis in microfluidic entropic trapping devices Biomedical Microdevices. 4: 237-244. DOI: 10.1023/A:1016056715762 |
0.605 |
|
| 2002 |
Rush BM, Dorfman KD, Brenner H, Kim S. Dispersion by pressure-driven flow in serpentine microfluidic channels Industrial and Engineering Chemistry Research. 41: 4652-4662. DOI: 10.1021/Ie020149E |
0.518 |
|
| 2001 |
Dorfman KD, Brenner H. "Vector Chromatography": Modeling Micropatterned Separation Devices. Journal of Colloid and Interface Science. 238: 390-413. PMID 11374936 DOI: 10.1006/Jcis.2001.7533 |
0.488 |
|
| 2001 |
Dorfman KD, Brenner H. Comment on "taylor dispersion of a solute in a microfluidic channel" [J. Appl. Phys. 89, 4667 (2001)] Journal of Applied Physics. 90: 6553-6554. DOI: 10.1063/1.1417984 |
0.478 |
|
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