| Year |
Citation |
Score |
| 2010 |
Xu Q, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, ... ... Krishna SS, et al. Structure of the γ-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-γ-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1354-64. PMID 20944232 DOI: 10.1107/S1744309110021214 |
0.352 |
|
| 2010 |
Axelrod HL, Kozbial P, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Carlton D, Caruthers J, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, et al. Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1347-53. PMID 20944231 DOI: 10.1107/S1744309109021988 |
0.385 |
|
| 2010 |
Axelrod HL, Das D, Abdubek P, Astakhova T, Bakolitsa C, Carlton D, Chen C, Chiu HJ, Clayton T, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, ... ... Krishna SS, et al. Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved α+β core domain and an auxiliary C-terminal treble-clef zinc finger. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1335-46. PMID 20944230 DOI: 10.1107/S1744309110020166 |
0.42 |
|
| 2010 |
Chiu HJ, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Clayton T, Das D, Deller MC, Duan L, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, ... ... Krishna SS, et al. The structure of Haemophilus influenzae prephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1317-25. PMID 20944228 DOI: 10.1107/S1744309110021688 |
0.4 |
|
| 2010 |
Xu Q, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, ... ... Krishna SS, et al. Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1297-305. PMID 20944225 DOI: 10.1107/S1744309110023055 |
0.402 |
|
| 2010 |
Yeh AP, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, ... ... Krishna SS, et al. Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 Å resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1287-96. PMID 20944224 DOI: 10.1107/S1744309110028228 |
0.447 |
|
| 2010 |
Xu Q, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, ... ... Krishna SS, et al. A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 Å resolution. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1281-6. PMID 20944223 DOI: 10.1107/S1744309110006548 |
0.394 |
|
| 2010 |
Bakolitsa C, Xu Q, Rife CL, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, ... ... Krishna SS, et al. Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1274-80. PMID 20944222 DOI: 10.1107/S1744309110032999 |
0.446 |
|
| 2010 |
Das D, Finn RD, Carlton D, Miller MD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, Ellrott K, ... ... Krishna SS, et al. The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1265-73. PMID 20944221 DOI: 10.1107/S1744309109046788 |
0.433 |
|
| 2010 |
Das D, Kozbial P, Han GW, Carlton D, Jaroszewski L, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, ... ... Krishna SS, et al. The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1254-60. PMID 20944219 DOI: 10.1107/S1744309109018168 |
0.427 |
|
| 2010 |
Kumar A, Lomize A, Jin KK, Carlton D, Miller MD, Jaroszewski L, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Feuerhelm J, ... ... Krishna SS, et al. Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1245-53. PMID 20944218 DOI: 10.1107/S1744309109042481 |
0.418 |
|
| 2010 |
Han GW, Elsliger MA, Yeates TO, Xu Q, Murzin AG, Krishna SS, Jaroszewski L, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, et al. Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1237-44. PMID 20944217 DOI: 10.1107/S1744309110025534 |
0.412 |
|
| 2010 |
Xu Q, McMullan D, Jaroszewski L, Krishna SS, Elsliger MA, Yeh AP, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grant J, et al. Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 Å resolution. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1230-6. PMID 20944216 DOI: 10.1107/S1744309109022192 |
0.429 |
|
| 2010 |
Han GW, Bakolitsa C, Miller MD, Kumar A, Carlton D, Najmanovich RJ, Abdubek P, Astakhova T, Axelrod HL, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, ... ... Krishna SS, et al. Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1218-25. PMID 20944214 DOI: 10.1107/S1744309109050416 |
0.444 |
|
| 2010 |
Bakolitsa C, Kumar A, McMullan D, Krishna SS, Miller MD, Carlton D, Najmanovich R, Abdubek P, Astakhova T, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Feuerhelm J, et al. The structure of the first representative of Pfam family PF06475 reveals a new fold with possible involvement in glycolipid metabolism. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1211-7. PMID 20944213 DOI: 10.1107/S1744309109022684 |
0.414 |
|
| 2010 |
Bakolitsa C, Kumar A, Carlton D, Miller MD, Krishna SS, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Deller MC, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, et al. Structure of LP2179, the first representative of Pfam family PF08866, suggests a new fold with a role in amino-acid metabolism. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1205-10. PMID 20944212 DOI: 10.1107/S1744309109023689 |
0.348 |
|
| 2010 |
Bakolitsa C, Bateman A, Jin KK, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Burra P, Carlton D, Chiu HJ, Clayton T, Das D, et al. The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45 Å resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1198-204. PMID 20944211 DOI: 10.1107/S1744309109025196 |
0.408 |
|
| 2010 |
Bakolitsa C, Kumar A, Jin KK, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Burra P, Carlton D, Chen C, Chiu HJ, Clayton T, et al. Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1182-9. PMID 20944209 DOI: 10.1107/S1744309109050647 |
0.444 |
|
| 2010 |
Das D, Grishin NV, Kumar A, Carlton D, Bakolitsa C, Miller MD, Abdubek P, Astakhova T, Axelrod HL, Burra P, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, ... ... Krishna SS, et al. The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1174-81. PMID 20944208 DOI: 10.1107/S1744309109022672 |
0.414 |
|
| 2010 |
Miller MD, Aravind L, Bakolitsa C, Rife CL, Carlton D, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Deller MC, Duan L, Feuerhelm J, Grant JC, Han GW, ... ... Krishna SS, et al. Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1167-73. PMID 20944207 DOI: 10.1107/S1744309110007517 |
0.452 |
|
| 2010 |
Krishna SS, Aravind L, Bakolitsa C, Caruthers J, Carlton D, Miller MD, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Deller MC, Duan L, Feuerhelm J, Grant JC, et al. The structure of SSO2064, the first representative of Pfam family PF01796, reveals a novel two-domain zinc-ribbon OB-fold architecture with a potential acyl-CoA-binding role. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1160-6. PMID 20944206 DOI: 10.1107/S1744309110002514 |
0.424 |
|
| 2010 |
Chiu HJ, Bakolitsa C, Skerra A, Lomize A, Carlton D, Miller MD, Krishna SS, Abdubek P, Astakhova T, Axelrod HL, Clayton T, Deller MC, Duan L, Feuerhelm J, Grant JC, et al. Structure of the first representative of Pfam family PF09410 (DUF2006) reveals a structural signature of the calycin superfamily that suggests a role in lipid metabolism. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1153-9. PMID 20944205 DOI: 10.1107/S1744309109037749 |
0.379 |
|
| 2010 |
Krishna SS, Weekes D, Bakolitsa C, Elsliger MA, Wilson IA, Godzik A, Wooley J. TOPSAN: use of a collaborative environment for annotating, analyzing and disseminating data on JCSG and PSI structures. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1143-7. PMID 20944203 DOI: 10.1107/S1744309110035736 |
0.395 |
|
| 2010 |
Das D, Finn RD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, Ellrott K, ... ... Krishna SS, et al. The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu. Protein Science : a Publication of the Protein Society. 19: 2131-40. PMID 20836087 DOI: 10.1002/Pro.497 |
0.435 |
|
| 2010 |
Weekes D, Krishna SS, Bakolitsa C, Wilson IA, Godzik A, Wooley J. TOPSAN: a collaborative annotation environment for structural genomics. Bmc Bioinformatics. 11: 426. PMID 20716366 DOI: 10.1186/1471-2105-11-426 |
0.329 |
|
| 2010 |
Krishna SS, Aravind L. The bridge-region of the Ku superfamily is an atypical zinc ribbon domain. Journal of Structural Biology. 172: 294-9. PMID 20580930 DOI: 10.1016/J.Jsb.2010.05.011 |
0.344 |
|
| 2010 |
Das D, Moiani D, Axelrod HL, Miller MD, McMullan D, Jin KK, Abdubek P, Astakhova T, Burra P, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Ernst D, ... Krishna SS, et al. Crystal structure of the first eubacterial Mre11 nuclease reveals novel features that may discriminate substrates during DNA repair. Journal of Molecular Biology. 397: 647-63. PMID 20122942 DOI: 10.1016/J.Jmb.2010.01.049 |
0.341 |
|
| 2010 |
Xu Q, Bateman A, Finn RD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, ... ... Krishna SS, et al. Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain. Journal of Molecular Biology. 396: 31-46. PMID 19913036 DOI: 10.1016/J.Jmb.2009.11.006 |
0.38 |
|
| 2009 |
Jaroszewski L, Li Z, Krishna SS, Bakolitsa C, Wooley J, Deacon AM, Wilson IA, Godzik A. Exploration of uncharted regions of the protein universe. Plos Biology. 7: e1000205. PMID 19787035 DOI: 10.1371/Journal.Pbio.1000205 |
0.376 |
|
| 2009 |
Xu Q, Traag BA, Willemse J, McMullan D, Miller MD, Elsliger MA, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Carlton D, Chen C, Chiu HJ, Chruszcz M, Clayton T, ... Krishna SS, et al. Structural and functional characterizations of SsgB, a conserved activator of developmental cell division in morphologically complex actinomycetes. The Journal of Biological Chemistry. 284: 25268-79. PMID 19567872 DOI: 10.1074/Jbc.M109.018564 |
0.425 |
|
| 2009 |
Xu Q, Carlton D, Miller MD, Elsliger MA, Krishna SS, Abdubek P, Astakhova T, Burra P, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Feuerhelm J, Grant JC, et al. Crystal structure of histidine phosphotransfer protein ShpA, an essential regulator of stalk biogenesis in Caulobacter crescentus. Journal of Molecular Biology. 390: 686-98. PMID 19450606 DOI: 10.1016/J.Jmb.2009.05.023 |
0.401 |
|
| 2009 |
Xu Q, Sudek S, McMullan D, Miller MD, Geierstanger B, Jones DH, Krishna SS, Spraggon G, Bursalay B, Abdubek P, Acosta C, Ambing E, Astakhova T, Axelrod HL, Carlton D, et al. Structural basis of murein peptide specificity of a gamma-D-glutamyl-l-diamino acid endopeptidase. Structure (London, England : 1993). 17: 303-13. PMID 19217401 DOI: 10.1016/J.Str.2008.12.008 |
0.375 |
|
| 2009 |
Das D, Kozbial P, Axelrod HL, Miller MD, McMullan D, Krishna SS, Abdubek P, Acosta C, Astakhova T, Burra P, Carlton D, Chen C, Chiu HJ, Clayton T, Deller MC, et al. Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 A resolution. Proteins. 75: 296-307. PMID 19173316 DOI: 10.1002/Prot.22360 |
0.437 |
|
| 2009 |
Das D, Krishna SS, McMullan D, Miller MD, Xu Q, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Burra P, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, et al. Crystal structure of the Fic (Filamentation induced by cAMP) family protein SO4266 (gi|24375750) from Shewanella oneidensis MR-1 at 1.6 A resolution. Proteins. 75: 264-71. PMID 19127588 DOI: 10.1002/Prot.22338 |
0.433 |
|
| 2009 |
Xu Q, Rife CL, Carlton D, Miller MD, Krishna SS, Elsliger MA, Abdubek P, Astakhova T, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grzechnik SK, Hale J, Han GW, et al. Crystal structure of a novel archaeal AAA+ ATPase SSO1545 from Sulfolobus solfataricus. Proteins. 74: 1041-9. PMID 19089981 DOI: 10.1002/Prot.22325 |
0.436 |
|
| 2008 |
Kozbial P, Xu Q, Chiu HJ, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Carlton D, Clayton T, Deller M, Duan L, Elias Y, et al. Crystal structures of MW1337R and lin2004: representatives of a novel protein family that adopt a four-helical bundle fold. Proteins. 71: 1589-96. PMID 18324683 DOI: 10.1002/Prot.22020 |
0.421 |
|
| 2008 |
Xu Q, Kozbial P, McMullan D, Krishna SS, Brittain SM, Ficarro SB, DiDonato M, Miller MD, Abdubek P, Axelrod HL, Chiu HJ, Clayton T, Duan L, Elsliger MA, Feuerhelm J, et al. Crystal structure of an ADP-ribosylated protein with a cytidine deaminase-like fold, but unknown function (TM1506), from Thermotoga maritima at 2.70 A resolution. Proteins. 71: 1546-52. PMID 18275082 DOI: 10.1002/Prot.21992 |
0.412 |
|
| 2008 |
Axelrod HL, McMullan D, Krishna SS, Miller MD, Elsliger MA, Abdubek P, Ambing E, Astakhova T, Carlton D, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grzechnik SK, Hale J, et al. Crystal structure of AICAR transformylase IMP cyclohydrolase (TM1249) from Thermotoga maritima at 1.88 A resolution. Proteins. 71: 1042-9. PMID 18260100 DOI: 10.1002/Prot.21967 |
0.355 |
|
| 2007 |
Xu Q, Saikatendu KS, Krishna SS, McMullan D, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Elsliger MA, et al. Crystal structure of MtnX phosphatase from Bacillus subtilis at 2.0 angstroms resolution provides a structural basis for bipartite phosphomonoester hydrolysis of 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate. Proteins. 69: 433-9. PMID 17654724 DOI: 10.1002/Prot.21602 |
0.385 |
|
| 2007 |
Zubieta C, Joseph R, Krishna SS, McMullan D, Kapoor M, Axelrod HL, Miller MD, Abdubek P, Acosta C, Astakhova T, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, et al. Identification and structural characterization of heme binding in a novel dye-decolorizing peroxidase, TyrA. Proteins. 69: 234-43. PMID 17654547 DOI: 10.1002/Prot.21673 |
0.396 |
|
| 2007 |
Zubieta C, Krishna SS, Kapoor M, Kozbial P, McMullan D, Axelrod HL, Miller MD, Abdubek P, Ambing E, Astakhova T, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, et al. Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif. Proteins. 69: 223-33. PMID 17654545 DOI: 10.1002/Prot.21550 |
0.418 |
|
| 2007 |
Krishna SS, Tautz L, Xu Q, McMullan D, Miller MD, Abdubek P, Ambing E, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Elsliger MA, et al. Crystal structure of NMA1982 from Neisseria meningitidis at 1.5 angstroms resolution provides a structural scaffold for nonclassical, eukaryotic-like phosphatases. Proteins. 69: 415-21. PMID 17636569 DOI: 10.1002/Prot.21314 |
0.392 |
|
| 2007 |
Zubieta C, Krishna SS, McMullan D, Miller MD, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, Deller M, DiDonato M, Duan L, et al. Crystal structure of homoserine O-succinyltransferase from Bacillus cereus at 2.4 A resolution. Proteins. 68: 999-1005. PMID 17546672 DOI: 10.1002/Prot.21208 |
0.314 |
|
| 2007 |
Weekes D, Miller MD, Krishna SS, McMullan D, McPhillips TM, Acosta C, Canaves JM, Elsliger MA, Floyd R, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, et al. Crystal structure of a transcription regulator (TM1602) from Thermotoga maritima at 2.3 A resolution. Proteins. 67: 247-52. PMID 17256761 DOI: 10.1002/Prot.21221 |
0.34 |
|
| 2006 |
Zhi D, Krishna SS, Cao H, Pevzner P, Godzik A. Representing and comparing protein structures as paths in three-dimensional space. Bmc Bioinformatics. 7: 460. PMID 17052359 DOI: 10.1186/1471-2105-7-460 |
0.37 |
|
| 2006 |
Kosloff M, Han GW, Krishna SS, Schwarzenbacher R, Fasnacht M, Elsliger MA, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, et al. Comparative structural analysis of a novel glutathioneS-transferase (ATU5508) from Agrobacterium tumefaciens at 2.0 A resolution. Proteins. 65: 527-37. PMID 16988933 DOI: 10.1002/Prot.21130 |
0.399 |
|
| 2006 |
Xu Q, Krishna SS, McMullan D, Schwarzenbacher R, Miller MD, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, DiDonato M, et al. Crystal structure of an ORFan protein (TM1622) from Thermotoga maritima at 1.75 A resolution reveals a fold similar to the Ran-binding protein Mog1p. Proteins. 65: 777-82. PMID 16948158 DOI: 10.1002/Prot.21015 |
0.418 |
|
| 2006 |
Mathews II, Krishna SS, Schwarzenbacher R, McMullan D, Jaroszewski L, Miller MD, Abdubek P, Agarwalla S, Ambing E, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, DiDonato M, et al. Crystal structure of phosphoribosylformyl-glycinamidine synthase II, PurS subunit (TM1244) from Thermotoga maritima at 1.90 A resolution. Proteins. 65: 249-54. PMID 16865708 DOI: 10.1002/Prot.21024 |
0.336 |
|
| 2006 |
Schwarzenbacher R, McMullan D, Krishna SS, Xu Q, Miller MD, Canaves JM, Elsliger MA, Floyd R, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, et al. Crystal structure of a glycerate kinase (TM1585) from Thermotoga maritima at 2.70 A resolution reveals a new fold. Proteins. 65: 243-8. PMID 16865707 DOI: 10.1002/Prot.21058 |
0.352 |
|
| 2006 |
Xu Q, Schwarzenbacher R, Krishna SS, McMullan D, Agarwalla S, Quijano K, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Elsliger MA, Grittini C, Grzechnik SK, et al. Crystal structure of acireductone dioxygenase (ARD) from Mus musculus at 2.06 angstrom resolution. Proteins. 64: 808-13. PMID 16783794 DOI: 10.1002/Prot.20947 |
0.347 |
|
| 2006 |
Cheek S, Krishna SS, Grishin NV. Structural classification of small, disulfide-rich protein domains. Journal of Molecular Biology. 359: 215-37. PMID 16618491 DOI: 10.1016/J.Jmb.2006.03.017 |
0.373 |
|
| 2006 |
Krishna SS, Sadreyev RI, Grishin NV. A tale of two ferredoxins: sequence similarity and structural differences. Bmc Structural Biology. 6: 8. PMID 16603087 DOI: 10.1186/1472-6807-6-8 |
0.365 |
|
| 2006 |
Jin KK, Krishna SS, Schwarzenbacher R, McMullan D, Abdubek P, Agarwalla S, Ambing E, Axelrod H, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Feuerhelm J, Godzik A, et al. Crystal structure of TM1367 from Thermotoga maritima at 1.90 A resolution reveals an atypical member of the cyclophilin (peptidylprolyl isomerase) fold. Proteins. 63: 1112-8. PMID 16544291 DOI: 10.1002/Prot.20894 |
0.392 |
|
| 2005 |
Majumdar I, Krishna SS, Grishin NV. PALSSE: a program to delineate linear secondary structural elements from protein structures. Bmc Bioinformatics. 6: 202. PMID 16095538 DOI: 10.1186/1471-2105-6-202 |
0.391 |
|
| 2005 |
Krishna SS, Grishin NV. Structural drift: a possible path to protein fold change. Bioinformatics (Oxford, England). 21: 1308-10. PMID 15604105 DOI: 10.1093/Bioinformatics/Bti227 |
0.394 |
|
| 2004 |
Cheek S, Qi Y, Krishna SS, Kinch LN, Grishin NV. 4SCOPmap: automated assignment of protein structures to evolutionary superfamilies. Bmc Bioinformatics. 5: 197. PMID 15598351 DOI: 10.1186/1471-2105-5-197 |
0.373 |
|
| 2004 |
Krishna SS, Grishin NV. Structurally analogous proteins do exist! Structure (London, England : 1993). 12: 1125-7. PMID 15242587 DOI: 10.1016/J.Str.2004.06.004 |
0.388 |
|
| 2004 |
Kumar R, Musiyenko A, Cioffi E, Oldenburg A, Adams B, Bitko V, Krishna SS, Barik S. A zinc-binding dual-specificity YVH1 phosphatase in the malaria parasite, Plasmodium falciparum, and its interaction with the nuclear protein, pescadillo. Molecular and Biochemical Parasitology. 133: 297-310. PMID 14698441 DOI: 10.1016/J.Molbiopara.2003.11.005 |
0.373 |
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| 2004 |
Krishna SS, Grishin NV. The finger domain of the human deubiquitinating enzyme HAUSP is a zinc ribbon. Cell Cycle. 3: 1046-1049. DOI: 10.4161/Cc.3.8.1017 |
0.358 |
|
| 2003 |
Kinch LN, Wrabl JO, Krishna SS, Majumdar I, Sadreyev RI, Qi Y, Pei J, Cheng H, Grishin NV. CASP5 assessment of fold recognition target predictions. Proteins. 53: 395-409. PMID 14579328 DOI: 10.1002/Prot.10557 |
0.301 |
|
| 2003 |
Krishna SS, Majumdar I, Grishin NV. Structural classification of zinc fingers: survey and summary. Nucleic Acids Research. 31: 532-50. PMID 12527760 DOI: 10.1093/Nar/Gkg161 |
0.413 |
|
| 2001 |
Krishna SS, Zhou T, Daugherty M, Osterman A, Zhang H. Structural basis for the catalysis and substrate specificity of homoserine kinase. Biochemistry. 40: 10810-8. PMID 11535056 DOI: 10.1021/Bi010851Z |
0.308 |
|
| 1999 |
Krishna SS, Hiremath CN, Munshi SK, Prahadeeswaran D, Sastri M, Savithri HS, Murthy MR. Three-dimensional structure of physalis mottle virus: implications for the viral assembly. Journal of Molecular Biology. 289: 919-34. PMID 10369772 DOI: 10.1006/Jmbi.1999.2787 |
0.364 |
|
| 1999 |
Krishna SS, Hiremath CN, Munshi SK, Prahadeeswaran D, Sastri M, Savithri HS, Murthy MRN. Three Dimensional Structure of Physalis Movirus: Implications for the Viral Assembly Journal of Molecular Biology. 289: 919. DOI: 10.2210/Pdb1Qjz/Pdb |
0.303 |
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