| Year |
Citation |
Score |
| 2024 |
Zou Z, Wang Q, Wu X, Schultz RM, Xie W. Kick-starting the zygotic genome: licensors, specifiers, and beyond. Embo Reports. PMID 39160344 DOI: 10.1038/s44319-024-00223-5 |
0.322 |
|
| 2024 |
Liu B, He Y, Wu X, Lin Z, Ma J, Qiu Y, Xiang Y, Kong F, Lai F, Pal M, Wang P, Ming J, Zhang B, Wang Q, Wu J, ... ... Xie W, et al. Mapping putative enhancers in mouse oocytes and early embryos reveals TCF3/12 as key folliculogenesis regulators. Nature Cell Biology. PMID 38839978 DOI: 10.1038/s41556-024-01422-x |
0.329 |
|
| 2024 |
Li L, Lai F, Liu L, Lu X, Hu X, Liu B, Lin Z, Fan Q, Kong F, Xu Q, Xie W. Lineage regulators TFAP2C and NR5A2 function as bipotency activators in totipotent embryos. Nature Structural & Molecular Biology. PMID 38243114 DOI: 10.1038/s41594-023-01199-x |
0.306 |
|
| 2024 |
Huang X, Balmer S, Lyu C, Xiang Y, Malik V, Wang H, Zhang Y, Cai B, Xie W, Hadjantonakis AK, Zhou H, Wang J. ZFP281 controls transcriptional and epigenetic changes promoting mouse pluripotent state transitions via DNMT3 and TET1. Developmental Cell. PMID 38237590 DOI: 10.1016/j.devcel.2023.12.018 |
0.431 |
|
| 2023 |
Qin D, Gu Y, Zhang Y, Wang S, Jiang T, Wang Y, Wang C, Chen C, Zhang T, Xu W, Wang H, Zhang K, Hu L, Li L, Xie W, et al. Phase-separated CCER1 coordinates the histone-to-protamine transition and male fertility. Nature Communications. 14: 8209. PMID 38081819 DOI: 10.1038/s41467-023-43480-z |
0.368 |
|
| 2023 |
Ji S, Chen F, Stein P, Wang J, Zhou Z, Wang L, Zhao Q, Lin Z, Liu B, Xu K, Lai F, Xiong Z, Hu X, Kong T, Kong F, ... ... Xie W, et al. OBOX regulates murine zygotic genome activation and early development. Nature. PMID 37459895 DOI: 10.1038/s41586-023-06428-3 |
0.324 |
|
| 2023 |
Sun Y, Xu X, Zhao W, Zhang Y, Chen K, Li Y, Wang X, Zhang M, Xue B, Yu W, Hou Y, Wang C, Xie W, Li C, Kong D, et al. RAD21 is the core subunit of the cohesin complex involved in directing genome organization. Genome Biology. 24: 155. PMID 37381036 DOI: 10.1186/s13059-023-02982-1 |
0.351 |
|
| 2023 |
Wu X, Wu X, Xie W. Activation, decommissioning, and dememorization: enhancers in a life cycle. Trends in Biochemical Sciences. PMID 37221124 DOI: 10.1016/j.tibs.2023.04.005 |
0.322 |
|
| 2023 |
Huang X, Balmer S, Lyu C, Xiang Y, Malik V, Wang H, Zhang Y, Xie W, Hadjantonakis AK, Zhou H, Wang J. ZFP281 coordinates DNMT3 and TET1 for transcriptional and epigenetic control in pluripotent state transitions. Biorxiv : the Preprint Server For Biology. PMID 36993548 DOI: 10.1101/2023.03.24.534143 |
0.424 |
|
| 2023 |
Xu M, Li X, Xie W, Lin C, Wang Q, Tao Z. ETHYLENE INSENSITIVE3/EIN3-LIKE1 modulate FLOWERING LOCUS C expression via histone demethylase interaction. Plant Physiology. PMID 36852894 DOI: 10.1093/plphys/kiad131 |
0.318 |
|
| 2022 |
Liu Y, Xu Z, Shi J, Zhang Y, Yang S, Chen Q, Song C, Geng S, Li Q, Li J, Xu GL, Xie W, Lin H, Li X. DNA methyltransferases are complementary in maintaining DNA methylation in embryonic stem cells. Iscience. 25: 105003. PMID 36117996 DOI: 10.1016/j.isci.2022.105003 |
0.358 |
|
| 2022 |
Zou Z, Zhang C, Wang Q, Hou Z, Xiong Z, Kong F, Wang Q, Song J, Liu B, Liu B, Wang L, Lai F, Fan Q, Tao W, Zhao S, ... ... Xie W, et al. Translatome and transcriptome co-profiling reveals a role of TPRXs in human zygotic genome activation. Science (New York, N.Y.). eabo7923. PMID 36074823 DOI: 10.1126/science.abo7923 |
0.364 |
|
| 2022 |
Meng TG, Lei WL, Lu X, Liu XY, Ma XS, Nie XQ, Zhao ZH, Li QN, Huang L, Hou Y, Ouyang YC, Li L, Tang TS, Schatten H, Xie W, et al. Maternal EHMT2 is essential for homologous chromosome segregation by regulating transcription in oocyte meiosis. International Journal of Biological Sciences. 18: 4513-4531. PMID 35864958 DOI: 10.7150/ijbs.75298 |
0.319 |
|
| 2022 |
Li L, Xie W. LncRNA HDAC11-AS1 Suppresses Atherosclerosis by Inhibiting HDAC11-Mediated Adropin Histone Deacetylation. Journal of Cardiovascular Translational Research. PMID 35505157 DOI: 10.1007/s12265-022-10248-7 |
0.306 |
|
| 2022 |
Xu Z, Shi J, Zhang Y, Liu Y, Zhao J, Chen Q, Song C, Geng S, Xie W, Wu F, Bai Y, Yang Y, Li X. Exerts Maternal and Sexually Dimorphic Effects on Genomic Imprinting. Frontiers in Cell and Developmental Biology. 10: 784128. PMID 35252168 DOI: 10.3389/fcell.2022.784128 |
0.352 |
|
| 2021 |
Zhang Y, Xie W. Building the genome architecture during the maternal to zygotic transition. Current Opinion in Genetics & Development. 72: 91-100. PMID 34896808 DOI: 10.1016/j.gde.2021.11.002 |
0.406 |
|
| 2021 |
Quan H, Tian H, Liu S, Xue Y, Zhang Y, Xie W, Gao YQ. Progressive Domain Segregation in Early Embryonic Development and Underlying Correlation to Genetic and Epigenetic Changes. Cells. 10. PMID 34685501 DOI: 10.3390/cells10102521 |
0.424 |
|
| 2021 |
Xu J, Shu Y, Yao G, Zhang Y, Niu W, Zhang Y, Ma X, Jin H, Zhang F, Shi S, Wang Y, Song W, Dai S, Cheng L, Zhang X, ... Xie W, et al. Parental methylome reprogramming in human uniparental blastocysts reveals germline memory transition. Genome Research. PMID 34330789 DOI: 10.1101/gr.273318.120 |
0.353 |
|
| 2021 |
Zhang X, Liu X, Du Z, Wei L, Fang H, Dong Q, Niu J, Li Y, Gao J, Zhang MQ, Xie W, Wang X. The loss of heterochromatin is associated with multiscale three-dimensional genome reorganization and aberrant transcription during cellular senescence. Genome Research. PMID 34140314 DOI: 10.1101/gr.275235.121 |
0.355 |
|
| 2021 |
Wang X, Xiang Y, Yu Y, Wang R, Zhang Y, Xu Q, Sun H, Zhao ZA, Jiang X, Wang X, Lu X, Qin D, Quan Y, Zhang J, Shyh-Chang N, ... ... Xie W, et al. Formative pluripotent stem cells show features of epiblast cells poised for gastrulation. Cell Research. PMID 33608671 DOI: 10.1038/s41422-021-00477-x |
0.321 |
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| 2021 |
Jiang W, Shi J, Zhao J, Wang Q, Cong D, Chen F, Zhang Y, Liu Y, Zhao J, Chen Q, Gu L, Zhou W, Wang C, Fang Z, Geng S, ... Xie W, et al. ZFP57 dictates allelic expression switch of target imprinted genes. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33500348 DOI: 10.1073/pnas.2005377118 |
0.39 |
|
| 2021 |
Jiang TX, Ma S, Han X, Luo ZY, Zhu QQ, Chiba T, Xie W, Lin K, Qiu XB. Proteasome activator PA200 maintains stability of histone marks during transcription and aging. Theranostics. 11: 1458-1472. PMID 33391545 DOI: 10.7150/thno.48744 |
0.351 |
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| 2021 |
Zhang B, Peng X, Xu F, Xie W. Tracking Histone Modifications in Embryos and Low-Input Samples Using Ultrasensitive STAR ChIP-Seq. Methods in Molecular Biology (Clifton, N.J.). 2214: 241-252. PMID 32944914 DOI: 10.1007/978-1-0716-0958-3_16 |
0.415 |
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| 2020 |
Feng Y, Wang Y, Wang X, He X, Yang C, Naseri A, Pederson T, Zheng J, Zhang S, Xiao X, Xie W, Ma H. Simultaneous epigenetic perturbation and genome imaging reveal distinct roles of H3K9me3 in chromatin architecture and transcription. Genome Biology. 21: 296. PMID 33292531 DOI: 10.1186/s13059-020-02201-1 |
0.341 |
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| 2020 |
Liu B, Xu Q, Wang Q, Feng S, Lai F, Wang P, Zheng F, Xiang Y, Wu J, Nie J, Qiu C, Xia W, Li L, Yu G, Lin Z, ... ... Xie W, et al. The landscape of RNA Pol II binding reveals a stepwise transition during ZGA. Nature. PMID 33116310 DOI: 10.1038/s41586-020-2847-y |
0.524 |
|
| 2020 |
Wang Q, Yu G, Ming X, Xia W, Xu X, Zhang Y, Zhang W, Li Y, Huang C, Xie H, Zhu B, Xie W. Imprecise DNMT1 activity coupled with neighbor-guided correction enables robust yet flexible epigenetic inheritance. Nature Genetics. PMID 32690947 DOI: 10.1038/S41588-020-0661-Y |
0.467 |
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| 2020 |
Yan P, Liu Z, Song M, Wu Z, Xu W, Li K, Ji Q, Wang S, Liu X, Yan K, Esteban CR, Ci W, Belmonte JCI, Xie W, Ren J, et al. Genome-wide R-loop Landscapes during Cell Differentiation and Reprogramming. Cell Reports. 32: 107870. PMID 32640235 DOI: 10.1016/j.celrep.2020.107870 |
0.313 |
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| 2020 |
Zhang K, Wu DY, Zheng H, Wang Y, Sun QR, Liu X, Wang LY, Xiong WJ, Wang Q, Rhodes JDP, Xu K, Li L, Lin Z, Yu G, Xia W, ... ... Xie W, et al. Analysis of Genome Architecture during SCNT Reveals a Role of Cohesin in Impeding Minor ZGA. Molecular Cell. PMID 32579944 DOI: 10.1016/J.Molcel.2020.06.001 |
0.442 |
|
| 2020 |
Ye M, Yang ZY, Zhang Y, Xing YX, Xie QG, Zhou JH, Wang L, Xie W, Kee K, Chian RC. Single-cell multiomic analysis of in vivo and in vitro matured human oocytes. Human Reproduction (Oxford, England). PMID 32325493 DOI: 10.1093/Humrep/Deaa044 |
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| 2020 |
Zhang H, Wu Z, Lu JY, Huang B, Zhou H, Xie W, Wang J, Shen X. DEAD-Box Helicase 18 Counteracts PRC2 to Safeguard Ribosomal DNA in Pluripotency Regulation. Cell Reports. 30: 81-97.e7. PMID 31914400 DOI: 10.1016/J.Celrep.2019.12.021 |
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| 2019 |
Xiang Y, Zhang Y, Xu Q, Zhou C, Liu B, Du Z, Zhang K, Zhang B, Wang X, Gayen S, Liu L, Wang Y, Li Y, Wang Q, Kalantry S, ... ... Xie W, et al. Epigenomic analysis of gastrulation identifies a unique chromatin state for primed pluripotency. Nature Genetics. PMID 31844322 DOI: 10.1038/S41588-019-0545-1 |
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| 2019 |
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| 2019 |
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0.451 |
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| 2019 |
Gao XL, Tian WJ, Liu B, Wu J, Xie W, Shen Q. High mobility group nucleosomal binding domain 2 protects against microcephaly by maintaining global chromatin accessibility during corticogenesis. The Journal of Biological Chemistry. PMID 31699896 DOI: 10.1074/Jbc.Ra119.010616 |
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| 2019 |
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| 2019 |
Xia W, Xu J, Yu G, Yao G, Xu K, Ma X, Zhang N, Liu B, Li T, Lin Z, Chen X, Li L, Wang Q, Shi D, Shi S, ... ... Xie W, et al. Resetting histone modifications during human parental-to-zygotic transition. Science (New York, N.Y.). PMID 31273069 DOI: 10.1126/Science.Aaw5118 |
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| 2019 |
Zheng H, Xie W. The role of 3D genome organization in development and cell differentiation. Nature Reviews. Molecular Cell Biology. PMID 31197269 DOI: 10.1038/S41580-019-0132-4 |
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| 2019 |
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| 2019 |
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| 2019 |
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| 2018 |
Zhang Y, Wang C, Liu X, Yang Q, Ji H, Yang M, Xu M, Zhou Y, Xie W, Luo Z, Lin C. AFF3-DNA methylation interplay in maintaining the mono-allelic expression pattern of XIST in terminally differentiated cells. Journal of Molecular Cell Biology. PMID 30535390 DOI: 10.1093/jmcb/mjy074 |
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| 2018 |
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| 2018 |
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| 2018 |
Xu X, Wang L, Liu B, Xie W, Chen YG. Activin/Smad2 and Wnt/β-catenin upregulate HAS2 and ALDH3A2 to facilitate mesendoderm differentiation of human ESCs. The Journal of Biological Chemistry. PMID 30282636 DOI: 10.1074/Jbc.Ra118.003688 |
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| 2018 |
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| 2018 |
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| 2018 |
Li Y, Zheng H, Wang Q, Zhou C, Wei L, Liu X, Zhang W, Zhang Y, Du Z, Wang X, Xie W. Genome-wide analyses reveal a role of Polycomb in promoting hypomethylation of DNA methylation valleys. Genome Biology. 19: 18. PMID 29422066 DOI: 10.1186/S13059-018-1390-8 |
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Xu Q, Xie W. Epigenome in Early Mammalian Development: Inheritance, Reprogramming and Establishment. Trends in Cell Biology. PMID 29217127 DOI: 10.1016/J.Tcb.2017.10.008 |
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| 2017 |
Qi Z, Li Y, Zhao B, Xu C, Liu Y, Li H, Zhang B, Wang X, Yang X, Xie W, Li B, Han JJ, Chen YG. BMP restricts stemness of intestinal Lgr5(+) stem cells by directly suppressing their signature genes. Nature Communications. 8: 13824. PMID 28059064 DOI: 10.1038/Ncomms13824 |
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| 2013 |
Xie W, Qu L, Meng L, Liu C, Wu J, Shou C. PES1 regulates sensitivity of colorectal cancer cells to anticancer drugs. Biochemical and Biophysical Research Communications. 431: 460-5. PMID 23333390 DOI: 10.1016/J.Bbrc.2012.12.145 |
0.361 |
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| 2012 |
Xie W, Feng Q, Su Y, Dong B, Wu J, Meng L, Qu L, Shou C. Transcriptional regulation of PES1 expression by c-Jun in colon cancer. Plos One. 7: e42253. PMID 22860098 DOI: 10.1371/Journal.Pone.0042253 |
0.312 |
|
| 2012 |
Xie W, Barr CL, Kim A, Yue F, Lee AY, Eubanks J, Dempster EL, Ren B. Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome. Cell. 148: 816-31. PMID 22341451 DOI: 10.1016/J.Cell.2011.12.035 |
0.668 |
|
| 2011 |
Kitada T, Schleker T, Sperling AS, Xie W, Gasser SM, Grunstein M. γH2A is a component of yeast heterochromatin required for telomere elongation. Cell Cycle (Georgetown, Tex.). 10: 293-300. PMID 21212735 DOI: 10.4161/Cc.10.2.14536 |
0.763 |
|
| 2010 |
Wu H, Coskun V, Tao J, Xie W, Ge W, Yoshikawa K, Li E, Zhang Y, Sun YE. Dnmt3a-dependent nonpromoter DNA methylation facilitates transcription of neurogenic genes. Science (New York, N.Y.). 329: 444-8. PMID 20651149 DOI: 10.1126/Science.1190485 |
0.45 |
|
| 2009 |
Chin MH, Mason MJ, Xie W, Volinia S, Singer M, Peterson C, Ambartsumyan G, Aimiuwu O, Richter L, Zhang J, Khvorostov I, Ott V, Grunstein M, Lavon N, Benvenisty N, et al. Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures. Cell Stem Cell. 5: 111-23. PMID 19570518 DOI: 10.1016/J.Stem.2009.06.008 |
0.602 |
|
| 2009 |
Sun W, Xie W, Xu F, Grunstein M, Li KC. Dissecting nucleosome free regions by a segmental semi-Markov model. Plos One. 4: e4721. PMID 19266098 DOI: 10.1371/Journal.Pone.0004721 |
0.643 |
|
| 2009 |
Xie W, Song C, Young NL, Sperling AS, Xu F, Sridharan R, Conway AE, Garcia BA, Plath K, Clark AT, Grunstein M. Histone h3 lysine 56 acetylation is linked to the core transcriptional network in human embryonic stem cells. Molecular Cell. 33: 417-27. PMID 19250903 DOI: 10.1016/J.Molcel.2009.02.004 |
0.772 |
|
| 2008 |
Ferrari R, Pellegrini M, Horwitz GA, Xie W, Berk AJ, Kurdistani SK. Epigenetic reprogramming by adenovirus e1a. Science (New York, N.Y.). 321: 1086-8. PMID 18719284 DOI: 10.1126/Science.1155546 |
0.416 |
|
| 2007 |
Maherali N, Sridharan R, Xie W, Utikal J, Eminli S, Arnold K, Stadtfeld M, Yachechko R, Tchieu J, Jaenisch R, Plath K, Hochedlinger K. Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution. Cell Stem Cell. 1: 55-70. PMID 18371336 DOI: 10.1016/J.Stem.2007.05.014 |
0.463 |
|
| 2007 |
Fan H, Zhao ZJ, Cheng YC, Shan YF, Lu ZH, Zhang JQ, Xie W. Gene induction and apoptosis in human hepatocellular carci-noma cells SMMC-7721 exposed to 5-aza-2'-deoxycytidine. Chinese Medical Journal. 120: 1626-31. PMID 17908484 |
0.306 |
|
| 2007 |
Xu F, Zhang Q, Zhang K, Xie W, Grunstein M. Sir2 deacetylates histone H3 lysine 56 to regulate telomeric heterochromatin structure in yeast. Molecular Cell. 27: 890-900. PMID 17889663 DOI: 10.1016/J.Molcel.2007.07.021 |
0.605 |
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