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Victor Ovchinnikov, Ph.D. - Publications

Affiliations: 
2006 University of Maryland, College Park, College Park, MD 
Area:
Mechanical Engineering
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8 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ovchinnikov V, Karplus M. Free Energy Simulations of Receptor-Binding Domain Opening of the SARS-CoV-2 Spike Indicate a Barrierless Transition with Slow Conformational Motions. The Journal of Physical Chemistry. B. 127: 8565-8575. PMID 37756691 DOI: 10.1021/acs.jpcb.3c05236  0.318
2013 Ovchinnikov V, Cecchini M, Karplus M. A simplified confinement method for calculating absolute free energies and free energy and entropy differences. The Journal of Physical Chemistry. B. 117: 750-62. PMID 23268557 DOI: 10.1021/Jp3080578  0.313
2012 Ovchinnikov V, Karplus M. Analysis and elimination of a bias in targeted molecular dynamics simulations of conformational transitions: application to calmodulin. The Journal of Physical Chemistry. B. 116: 8584-603. PMID 22409258 DOI: 10.1021/Jp212634Z  0.451
2011 Ovchinnikov V, Karplus M, Vanden-Eijnden E. Free energy of conformational transition paths in biomolecules: the string method and its application to myosin VI. The Journal of Chemical Physics. 134: 085103. PMID 21361558 DOI: 10.1063/1.3544209  0.305
2008 Ovchinnikov V, Choudhari MM, Piomelli U. Numerical simulations of boundary-layer bypass transition due to high-amplitude free-stream turbulence Journal of Fluid Mechanics. 613: 135-169. DOI: 10.1017/S0022112008003017  0.63
2006 Ovchinnikov V, Piomelli U, Choudhari MM. Numerical simulations of boundary-layer transition induced by a cylinder wake Journal of Fluid Mechanics. 547: 413-441. DOI: 10.1017/S0022112005007342  0.622
2004 Ovchinnikov V, Piomelli U, Choudhari MM. Inflow conditions for numerical simulations of bypass transition Aiaa Paper. 5774-5788.  0.621
2003 Piomelli U, Choudhari MM, Ovchinnikov V, Balaras E. Numerical simulations of wake/boundary layer interactions 41st Aerospace Sciences Meeting and Exhibit.  0.596
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