Year |
Citation |
Score |
2022 |
Aouad M, Flandrois JP, Jauffrit F, Gouy M, Gribaldo S, Brochier-Armanet C. A divide-and-conquer phylogenomic approach based on character supermatrices resolves early steps in the evolution of the Archaea. Bmc Ecology and Evolution. 22: 1. PMID 34986784 DOI: 10.1186/s12862-021-01952-0 |
0.382 |
|
2021 |
Blanquart S, Groussin M, Le Roy A, Szöllosi GJ, Girard E, Franzetti B, Gouy M, Madern D. Resurrection of Ancestral Malate Dehydrogenases Reveals the Evolutionary History of Halobacterial Proteins : Deciphering Gene Trajectories and Changes in Biochemical Properties. Molecular Biology and Evolution. PMID 33974066 DOI: 10.1093/molbev/msab146 |
0.724 |
|
2021 |
Gouy M, Tannier E, Comte N, Parsons DP. Seaview Version 5: A Multiplatform Software for Multiple Sequence Alignment, Molecular Phylogenetic Analyses, and Tree Reconciliation. Methods in Molecular Biology (Clifton, N.J.). 2231: 241-260. PMID 33289897 DOI: 10.1007/978-1-0716-1036-7_15 |
0.435 |
|
2020 |
Lecocq M, Groussin M, Gouy M, Brochier-Armanet C. The Molecular Determinants of Thermoadaptation: Methanococcales as a Case Study. Molecular Biology and Evolution. PMID 33450027 DOI: 10.1093/molbev/msaa312 |
0.741 |
|
2020 |
Comte N, Morel B, Hasić D, Guéguen L, Boussau B, Daubin V, Penel S, Scornavacca C, Gouy M, Stamatakis A, Tannier E, Parsons DP. Treerecs: an integrated phylogenetic tool, from sequences to reconciliations. Bioinformatics (Oxford, England). PMID 33085745 DOI: 10.1093/Bioinformatics/Btaa615 |
0.85 |
|
2018 |
Aouad M, Taib N, Oudart A, Lecocq M, Gouy M, Brochier-Armanet C. Extreme halophilic archaea derive from two distinct methanogen Class II lineages. Molecular Phylogenetics and Evolution. PMID 29684598 DOI: 10.1016/J.Ympev.2018.04.011 |
0.498 |
|
2016 |
Jauffrit F, Penel S, Delmotte S, Rey C, de Vienne DM, Gouy M, Charrier JP, Flandrois JP, Brochier-Armanet C. RiboDB database: a comprehensive resource for prokaryotic systematics. Molecular Biology and Evolution. PMID 27189556 DOI: 10.1093/Molbev/Msw088 |
0.436 |
|
2015 |
Groussin M, Boussau B, Szöllősi G, Eme L, Gouy M, Brochier-Armanet C, Daubin V. Gene acquisitions from bacteria at the origins of major archaeal clades are vastly overestimated. Molecular Biology and Evolution. PMID 26541173 DOI: 10.1093/Molbev/Msv249 |
0.803 |
|
2015 |
Flandrois JP, Perrière G, Gouy M. leBIBIQBPP: a set of databases and a webtool for automatic phylogenetic analysis of prokaryotic sequences. Bmc Bioinformatics. 16: 251. PMID 26264559 DOI: 10.1186/S12859-015-0692-Z |
0.842 |
|
2015 |
Groussin M, Hobbs JK, Szöll?si GJ, Gribaldo S, Arcus VL, Gouy M. Toward more accurate ancestral protein genotype-phenotype reconstructions with the use of species tree-aware gene trees. Molecular Biology and Evolution. 32: 13-22. PMID 25371435 DOI: 10.1093/Molbev/Msu305 |
0.782 |
|
2014 |
Rochette NC, Brochier-Armanet C, Gouy M. Phylogenomic test of the hypotheses for the evolutionary origin of eukaryotes. Molecular Biology and Evolution. 31: 832-45. PMID 24398320 DOI: 10.1093/Molbev/Mst272 |
0.848 |
|
2013 |
Groussin M, Boussau B, Charles S, Blanquart S, Gouy M. The molecular signal for the adaptation to cold temperature during early life on Earth. Biology Letters. 9: 20130608. PMID 24046876 DOI: 10.1098/Rsbl.2013.0608 |
0.824 |
|
2013 |
Guéguen L, Gaillard S, Boussau B, Gouy M, Groussin M, Rochette NC, Bigot T, Fournier D, Pouyet F, Cahais V, Bernard A, Scornavacca C, Nabholz B, Haudry A, Dachary L, et al. Bio++: efficient extensible libraries and tools for computational molecular evolution. Molecular Biology and Evolution. 30: 1745-50. PMID 23699471 DOI: 10.1093/Molbev/Mst097 |
0.83 |
|
2013 |
Groussin M, Boussau B, Gouy M. A branch-heterogeneous model of protein evolution for efficient inference of ancestral sequences. Systematic Biology. 62: 523-38. PMID 23475623 DOI: 10.1093/Sysbio/Syt016 |
0.825 |
|
2013 |
Boussau B, Szöllosi GJ, Duret L, Gouy M, Tannier E, Daubin V. Genome-scale coestimation of species and gene trees. Genome Research. 23: 323-30. PMID 23132911 DOI: 10.1101/Gr.141978.112 |
0.855 |
|
2012 |
Abby SS, Tannier E, Gouy M, Daubin V. Lateral gene transfer as a support for the tree of life. Proceedings of the National Academy of Sciences of the United States of America. 109: 4962-7. PMID 22416123 DOI: 10.1073/Pnas.1116871109 |
0.821 |
|
2012 |
Boussau B, Gouy M. What genomes have to say about the evolution of the Earth Gondwana Research. 21: 483-494. DOI: 10.1016/J.Gr.2011.08.002 |
0.742 |
|
2011 |
Groussin M, Gouy M. Adaptation to environmental temperature is a major determinant of molecular evolutionary rates in archaea. Molecular Biology and Evolution. 28: 2661-74. PMID 21498602 DOI: 10.1093/Molbev/Msr098 |
0.763 |
|
2011 |
Bergeron M, Dauwalder O, Gouy M, Freydiere AM, Bes M, Meugnier H, Benito Y, Etienne J, Lina G, Vandenesch F, Boisset S. Species identification of staphylococci by amplification and sequencing of the tuf gene compared to the gap gene and by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology. 30: 343-54. PMID 20967479 DOI: 10.1007/S10096-010-1091-Z |
0.414 |
|
2010 |
Abby SS, Tannier E, Gouy M, Daubin V. Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests. Bmc Bioinformatics. 11: 324. PMID 20550700 DOI: 10.1186/1471-2105-11-324 |
0.826 |
|
2010 |
Gouy M, Guindon S, Gascuel O. SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Molecular Biology and Evolution. 27: 221-4. PMID 19854763 DOI: 10.1093/Molbev/Msp259 |
0.467 |
|
2010 |
Arigon AM, Perrière G, Gouy M. Proposals for classification methods dedicated to biological data International Journal of Biomedical Engineering and Technology. 3: 4-21. DOI: 10.1504/Ijbet.2010.029649 |
0.836 |
|
2009 |
Boussau B, Guéguen L, Gouy M. A mixture model and a hidden markov model to simultaneously detect recombination breakpoints and reconstruct phylogenies. Evolutionary Bioinformatics Online. 5: 67-79. PMID 19812727 DOI: 10.4137/Ebo.S2242 |
0.792 |
|
2009 |
Penel S, Arigon AM, Dufayard JF, Sertier AS, Daubin V, Duret L, Gouy M, Perrière G. Databases of homologous gene families for comparative genomics. Bmc Bioinformatics. 10: S3. PMID 19534752 DOI: 10.1186/1471-2105-10-S6-S3 |
0.839 |
|
2008 |
Boussau B, Blanquart S, Necsulea A, Lartillot N, Gouy M. Parallel adaptations to high temperatures in the Archaean eon. Nature. 456: 942-5. PMID 19037246 DOI: 10.1038/Nature07393 |
0.736 |
|
2008 |
Boussau B, Guéguen L, Gouy M. Accounting for horizontal gene transfers explains conflicting hypotheses regarding the position of aquificales in the phylogeny of Bacteria. Bmc Evolutionary Biology. 8: 272. PMID 18834516 DOI: 10.1186/1471-2148-8-272 |
0.795 |
|
2008 |
Arigon AM, Perrière G, Gouy M. Automatic identification of large collections of protein-coding or rRNA sequences. Biochimie. 90: 609-14. PMID 17920750 DOI: 10.1016/J.Biochi.2007.08.006 |
0.847 |
|
2008 |
Gouy M, Delmotte S. Remote access to ACNUC nucleotide and protein sequence databases at PBIL. Biochimie. 90: 555-62. PMID 17825976 DOI: 10.1016/J.Biochi.2007.07.003 |
0.535 |
|
2006 |
Boussau B, Gouy M. Efficient likelihood computations with nonreversible models of evolution. Systematic Biology. 55: 756-68. PMID 17060197 DOI: 10.1080/10635150600975218 |
0.729 |
|
2006 |
Lefébure T, Douady CJ, Gouy M, Trontelj P, Briolay J, Gibert J. Phylogeography of a subterranean amphipod reveals cryptic diversity and dynamic evolution in extreme environments. Molecular Ecology. 15: 1797-806. PMID 16689899 DOI: 10.1111/J.1365-294X.2006.02888.X |
0.397 |
|
2006 |
Arigon AM, Perrière G, Gouy M. HoSeqI: automated homologous sequence identification in gene family databases. Bioinformatics (Oxford, England). 22: 1786-7. PMID 16682422 DOI: 10.1093/Bioinformatics/Btl179 |
0.832 |
|
2006 |
Lefébure T, Douady CJ, Gouy M, Gibert J. Relationship between morphological taxonomy and molecular divergence within Crustacea: proposal of a molecular threshold to help species delimitation. Molecular Phylogenetics and Evolution. 40: 435-47. PMID 16647275 DOI: 10.1016/J.Ympev.2006.03.014 |
0.422 |
|
2006 |
Grassot J, Gouy M, Perrière G, Mouchiroud G. Origin and molecular evolution of receptor tyrosine kinases with immunoglobulin-like domains. Molecular Biology and Evolution. 23: 1232-41. PMID 16551648 DOI: 10.1093/Molbev/Msk007 |
0.792 |
|
2005 |
Aouacheria A, Brunet F, Gouy M. Phylogenomics of life-or-death switches in multicellular animals: Bcl-2, BH3-Only, and BNip families of apoptotic regulators. Molecular Biology and Evolution. 22: 2395-416. PMID 16093567 DOI: 10.1093/Molbev/Msi234 |
0.456 |
|
2005 |
Calteau A, Gouy M, Perrière G. Horizontal transfer of two operons coding for hydrogenases between bacteria and archaea. Journal of Molecular Evolution. 60: 557-65. PMID 15983865 DOI: 10.1007/S00239-004-0094-8 |
0.814 |
|
2005 |
Aouacheria A, Navratil V, Wen W, Jiang M, Mouchiroud D, Gautier C, Gouy M, Zhang M. In silico whole-genome scanning of cancer-associated nonsynonymous SNPs and molecular characterization of a dynein light chain tumour variant. Oncogene. 24: 6133-42. PMID 15897869 DOI: 10.1038/Sj.Onc.1208745 |
0.586 |
|
2005 |
Dufayard JF, Duret L, Penel S, Gouy M, Rechenmann F, Perrière G. Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases. Bioinformatics (Oxford, England). 21: 2596-603. PMID 15713731 DOI: 10.1093/Bioinformatics/Bti325 |
0.844 |
|
2005 |
Huguet V, Gouy M, Normand P, Zimpfer JF, Fernandez MP. Molecular phylogeny of Myricaceae: a reexamination of host-symbiont specificity. Molecular Phylogenetics and Evolution. 34: 557-68. PMID 15683929 DOI: 10.1016/J.Ympev.2004.11.018 |
0.359 |
|
2005 |
Aurell H, Farge P, Meugnier H, Gouy M, Forey F, Lina G, Vandenesch F, Etienne J, Jarraud S. Clinical and environmental isolates of Legionella pneumophila serogroup 1 cannot be distinguished by sequence analysis of two surface protein genes and three housekeeping genes. Applied and Environmental Microbiology. 71: 282-9. PMID 15640199 DOI: 10.1128/Aem.71.1.282-289.2005 |
0.464 |
|
2004 |
Thomarat F, Vivarès CP, Gouy M. Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes. Journal of Molecular Evolution. 59: 780-91. PMID 15599510 DOI: 10.1007/S00239-004-2673-0 |
0.86 |
|
2004 |
Aouacheria A, Cluzel C, Lethias C, Gouy M, Garrone R, Exposito JY. Invertebrate data predict an early emergence of vertebrate fibrillar collagen clades and an anti-incest model. The Journal of Biological Chemistry. 279: 47711-9. PMID 15358765 DOI: 10.1074/Jbc.M408950200 |
0.416 |
|
2004 |
Le Roux F, Gay M, Lambert C, Nicolas JL, Gouy M, Berthe F. Phylogenetic study and identification of Vibrio splendidus-related strains based on gyrB gene sequences. Diseases of Aquatic Organisms. 58: 143-50. PMID 15109135 DOI: 10.3354/Dao058143 |
0.434 |
|
2003 |
Perrière G, Combet C, Penel S, Blanchet C, Thioulouse J, Geourjon C, Grassot J, Charavay C, Gouy M, Duret L, Deléage G. Integrated databanks access and sequence/structure analysis services at the PBIL. Nucleic Acids Research. 31: 3393-9. PMID 12824334 DOI: 10.1093/Nar/Gkg530 |
0.555 |
|
2002 |
Vivarès CP, Gouy M, Thomarat F, Méténier G. Functional and evolutionary analysis of a eukaryotic parasitic genome. Current Opinion in Microbiology. 5: 499-505. PMID 12354558 DOI: 10.1016/S1369-5274(02)00356-9 |
0.842 |
|
2002 |
Tahi F, Gouy M, Régnier M. Automatic RNA secondary structure prediction with a comparative approach. Computers & Chemistry. 26: 521-30. PMID 12144180 DOI: 10.1016/S0097-8485(02)00012-8 |
0.489 |
|
2002 |
Daubin V, Gouy M, Perrière G. A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history. Genome Research. 12: 1080-90. PMID 12097345 DOI: 10.1101/Gr.187002 |
0.861 |
|
2002 |
Rizzon C, Marais G, Gouy M, Biémont C. Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome. Genome Research. 12: 400-7. PMID 11875027 DOI: 10.1101/Gr.210802 |
0.378 |
|
2001 |
Daubin V, Gouy M, Perrière G. Bacterial molecular phylogeny using supertree approach. Genome Informatics. International Conference On Genome Informatics. 12: 155-64. PMID 11791234 DOI: 10.11234/Gi1990.12.155 |
0.865 |
|
2001 |
Katinka MD, Duprat S, Cornillot E, Méténier G, Thomarat F, Prensier G, Barbe V, Peyretaillade E, Brottier P, Wincker P, Delbac F, El Alaoui H, Peyret P, Saurin W, Gouy M, et al. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Nature. 414: 450-3. PMID 11719806 DOI: 10.1038/35106579 |
0.844 |
|
2001 |
Aouacheria A, Arnaud E, Venet S, Lalle P, Gouy M, Rigal D, Gillet G. Nrh, a human homologue of Nr-13 associates with Bcl-Xs and is an inhibitor of apoptosis. Oncogene. 20: 5846-55. PMID 11593390 DOI: 10.1038/Sj.Onc.1204740 |
0.398 |
|
2001 |
Le Roux F, Lorenzo G, Peyret P, Audemard C, Figueras A, Vivarès C, Gouy M, Berthe F. Molecular evidence for the existence of two species of Marteilia in Europe. The Journal of Eukaryotic Microbiology. 48: 449-54. PMID 11456321 DOI: 10.1111/J.1550-7408.2001.Tb00178.X |
0.383 |
|
2001 |
Pierrugues O, Brutesco C, Oshiro J, Gouy M, Deveaux Y, Carman GM, Thuriaux P, Kazmaier M. Lipid phosphate phosphatases in Arabidopsis. Regulation of the AtLPP1 gene in response to stress. The Journal of Biological Chemistry. 276: 20300-8. PMID 11278556 DOI: 10.1074/Jbc.M009726200 |
0.401 |
|
2000 |
Figueras A, Lorenzo G, Ordás MC, Gouy M, Novoa B. Sequence of the Small Subunit Ribosomal RNA Gene of Perkinsus atlanticus-like Isolated from Carpet Shell Clam in Galicia, Spain. Marine Biotechnology (New York, N.Y.). 2: 419-428. PMID 11246408 DOI: 10.1007/S101260000015 |
0.521 |
|
2000 |
Berthe FC, Le Roux F, Peyretaillade E, Peyret P, Rodriguez D, Gouy M, Vivarès CP. Phylogenetic analysis of the small subunit ribosomal RNA of Marteilia refringens validates the existence of phylum Paramyxea (Desportes and Perkins, 1990). The Journal of Eukaryotic Microbiology. 47: 288-93. PMID 10847346 DOI: 10.1111/J.1550-7408.2000.Tb00049.X |
0.51 |
|
2000 |
Perrière G, Duret L, Gouy M. HOBACGEN: database system for comparative genomics in bacteria. Genome Research. 10: 379-85. PMID 10720578 DOI: 10.1101/Gr.10.3.379 |
0.835 |
|
1999 |
Tourasse NJ, Gouy M. Accounting for evolutionary rate variation among sequence sites consistently changes universal phylogenies deduced from rRNA and protein-coding genes. Molecular Phylogenetics and Evolution. 13: 159-68. PMID 10508549 DOI: 10.1006/Mpev.1999.0675 |
0.782 |
|
1999 |
Galtier N, Tourasse N, Gouy M. A nonhyperthermophilic common ancestor to extant life forms. Science (New York, N.Y.). 283: 220-1. PMID 9880254 DOI: 10.1126/Science.283.5399.220 |
0.787 |
|
1998 |
Jeanmougin F, Thompson JD, Gouy M, Higgins DG, Gibson TJ. Multiple sequence alignment with Clustal X. Trends in Biochemical Sciences. 23: 403-5. PMID 9810230 DOI: 10.1016/S0968-0004(98)01285-7 |
0.423 |
|
1998 |
Robinson M, Gouy M, Gautier C, Mouchiroud D. Sensitivity of the relative-rate test to taxonomic sampling. Molecular Biology and Evolution. 15: 1091-8. PMID 9729873 DOI: 10.1093/Oxfordjournals.Molbev.A026016 |
0.607 |
|
1998 |
Peyretaillade E, Biderre C, Peyret P, Duffieux F, Méténier G, Gouy M, Michot B, Vivarès CP. Microsporidian Encephalitozoon cuniculi, a unicellular eukaryote with an unusual chromosomal dispersion of ribosomal genes and a LSU rRNA reduced to the universal core. Nucleic Acids Research. 26: 3513-20. PMID 9671812 DOI: 10.1093/Nar/26.15.3513 |
0.47 |
|
1998 |
Galtier N, Gouy M. Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis. Molecular Biology and Evolution. 15: 871-9. PMID 9656487 DOI: 10.1093/Oxfordjournals.Molbev.A025991 |
0.711 |
|
1998 |
Peyretaillade E, Broussolle V, Peyret P, Méténier G, Gouy M, Vivarès CP. Microsporidia, amitochondrial protists, possess a 70-kDa heat shock protein gene of mitochondrial evolutionary origin. Molecular Biology and Evolution. 15: 683-9. PMID 9615449 DOI: 10.1093/Oxfordjournals.Molbev.A025971 |
0.493 |
|
1998 |
Perrière G, Gouy M, Gojobori T. The non-redundant Bacillus subtilis (NRSub) database: update 1998. Nucleic Acids Research. 26: 60-2. PMID 9399801 DOI: 10.1093/Nar/26.1.60 |
0.825 |
|
1998 |
Courties C, Perasso R, Chrétiennot-Dinet MJ, Gouy M, Guillou L, Troussellier M. Phylogenetic analysis and genome size of Ostreococcus tauri (Chlorophyta, Prasinophyceae) Journal of Phycology. 34: 844-849. DOI: 10.1046/J.1529-8817.1998.340844.X |
0.489 |
|
1998 |
Courties C, Perasso R, Chrétiennot-Dinet M, Gouy M, Guillou L, Troussellier M. PHYLOGENETIC ANALYSIS AND GENOME SIZE OF OSTREOCOCCUS TAURI (CHLOROPHYTA, PRASINOPHYCEAE) Journal of Phycology. 34: 844-849. DOI: 10.1046/j.1529-8817.1998.340844.x |
0.306 |
|
1997 |
Pawlowski J, Bolivar I, Fahrni JF, de Vargas C, Gouy M, Zaninetti L. Extreme differences in rates of molecular evolution of foraminifera revealed by comparison of ribosomal DNA sequences and the fossil record. Molecular Biology and Evolution. 14: 498-505. PMID 9159927 DOI: 10.1093/Oxfordjournals.Molbev.A025786 |
0.534 |
|
1997 |
Graur D, Gouy M, Duret L. Evolutionary affinities of the order Perissodactyla and the phylogenetic status of the superordinal taxa Ungulata and Altungulata. Molecular Phylogenetics and Evolution. 7: 195-200. PMID 9126561 DOI: 10.1006/Mpev.1996.0391 |
0.452 |
|
1997 |
Tourasse NJ, Gouy M. Evolutionary distances between nucleotide sequences based on the distribution of substitution rates among sites as estimated by parsimony. Molecular Biology and Evolution. 14: 287-98. PMID 9066796 DOI: 10.1093/Oxfordjournals.Molbev.A025764 |
0.765 |
|
1996 |
Galtier N, Gouy M, Gautier C. SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. Computer Applications in the Biosciences : Cabios. 12: 543-8. PMID 9021275 DOI: 10.1093/Bioinformatics/12.6.543 |
0.791 |
|
1996 |
Perrière G, Gouy M. WWW-query: an on-line retrieval system for biological sequence banks. Biochimie. 78: 364-9. PMID 8905155 DOI: 10.1016/0300-9084(96)84768-7 |
0.827 |
|
1996 |
Pawlowski J, Bolivar I, Fahrni JF, Cavalier-Smith T, Gouy M. Early origin of foraminifera suggested by SSU rRNA gene sequences. Molecular Biology and Evolution. 13: 445-50. PMID 8742633 DOI: 10.1093/Oxfordjournals.Molbev.A025605 |
0.628 |
|
1996 |
Graur D, Duret L, Gouy M. Phylogenetic position of the order Lagomorpha (rabbits, hares and allies) Nature. 379: 333-5. PMID 8552186 DOI: 10.1038/379333A0 |
0.435 |
|
1995 |
Michaille JJ, Gouy M, Blanchet S, Duret L. Isolation and characterization of a cDNA encoding a chicken actin-like protein. Gene. 154: 205-9. PMID 7890165 DOI: 10.1016/0378-1119(94)00865-P |
0.424 |
|
1995 |
Galtier N, Gouy M. Inferring phylogenies from DNA sequences of unequal base compositions. Proceedings of the National Academy of Sciences of the United States of America. 92: 11317-21. PMID 7479987 DOI: 10.1073/Pnas.92.24.11317 |
0.717 |
|
1994 |
Orso S, Gouy M, Navarro E, Normand P. Molecular phylogenetic analysis of Nitrobacter spp. International Journal of Systematic Bacteriology. 44: 83-6. PMID 8123564 DOI: 10.1099/00207713-44-1-83 |
0.418 |
|
1994 |
Duret L, Mouchiroud D, Gouy M. HOVERGEN: a database of homologous vertebrate genes. Nucleic Acids Research. 22: 2360-5. PMID 8036164 DOI: 10.1093/Nar/22.12.2360 |
0.636 |
|
1994 |
Galtier N, Gouy M. Molecular phylogeny of Eubacteria: a new multiple tree analysis method applied to 15 sequence data sets questions the monophyly of gram-positive bacteria. Research in Microbiology. 145: 531-41. PMID 7855439 DOI: 10.1016/0923-2508(94)90030-2 |
0.722 |
|
1994 |
Perrière G, Gouy M, Gojobori T. NRSub: a non-redundant data base for the Bacillus subtilis genome. Nucleic Acids Research. 22: 5525-9. PMID 7838704 DOI: 10.1093/Nar/22.25.5525 |
0.816 |
|
1994 |
Pawlowski J, Bolivar I, Guiard-Maffia J, Gouy M. Phylogenetic position of foraminifera inferred from LSU rRNA gene sequences. Molecular Biology and Evolution. 11: 929-38. PMID 7815931 DOI: 10.1093/Oxfordjournals.Molbev.A040174 |
0.579 |
|
1993 |
Cournoyer B, Gouy M, Normand P. Molecular phylogeny of the symbiotic actinomycetes of the genus Frankia matches host-plant infection processes. Molecular Biology and Evolution. 10: 1303-16. PMID 8277856 DOI: 10.1093/Oxfordjournals.Molbev.A040077 |
0.386 |
|
1992 |
Mounier N, Gouy M, Mouchiroud D, Prudhomme JC. Insect muscle actins differ distinctly from invertebrate and vertebrate cytoplasmic actins. Journal of Molecular Evolution. 34: 406-15. PMID 1602494 DOI: 10.1007/Bf00162997 |
0.337 |
|
1992 |
Normand P, Gouy M, Cournoyer B, Simonet P. Nucleotide sequence of nifD from Frankia alni strain ArI3: phylogenetic inferences. Molecular Biology and Evolution. 9: 495-506. PMID 1584016 DOI: 10.1093/Oxfordjournals.Molbev.A040737 |
0.554 |
|
1992 |
Perrin-Pecontal P, Gouy M, Nigon VM, Trabuchet G. Evolution of the primate beta-globin gene region: nucleotide sequence of the delta-beta-globin intergenic region of gorilla and phylogenetic relationships between African apes and man. Journal of Molecular Evolution. 34: 17-30. PMID 1556740 DOI: 10.1007/Bf00163849 |
0.453 |
|
1990 |
Li WH, Gouy M, Sharp PM, O'hUigin C, Yang YW. Molecular phylogeny of Rodentia, Lagomorpha, Primates, Artiodactyla, and Carnivora and molecular clocks. Proceedings of the National Academy of Sciences of the United States of America. 87: 6703-7. PMID 2395871 DOI: 10.1073/Pnas.87.17.6703 |
0.449 |
|
1990 |
Li WH, Gouy M. Statistical tests of molecular phylogenies. Methods in Enzymology. 183: 645-59. PMID 2314297 DOI: 10.1016/0076-6879(90)83042-8 |
0.559 |
|
1990 |
Gouy M, Li W. Archaebacterial or eocyte tree Nature. 343: 419-419. DOI: 10.1038/343419A0 |
0.52 |
|
1989 |
Wolfe KH, Gouy M, Yang YW, Sharp PM, Li WH. Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data. Proceedings of the National Academy of Sciences of the United States of America. 86: 6201-5. PMID 2762323 DOI: 10.1073/Pnas.86.16.6201 |
0.608 |
|
1989 |
Gouy M, Li WH. Phylogenetic analysis based on rRNA sequences supports the archaebacterial rather than the eocyte tree. Nature. 339: 145-7. PMID 2497353 DOI: 10.1038/339145A0 |
0.647 |
|
1989 |
Gouy M, Li WH. Molecular phylogeny of the kingdoms Animalia, Plantae, and Fungi. Molecular Biology and Evolution. 6: 109-22. PMID 2469937 DOI: 10.1093/Oxfordjournals.Molbev.A040536 |
0.631 |
|
1988 |
Mémet S, Gouy M, Marck C, Sentenac A, Buhler JM. RPA190, the gene coding for the largest subunit of yeast RNA polymerase A. The Journal of Biological Chemistry. 263: 2830-9. PMID 2830265 |
0.323 |
|
1987 |
Higgins DG, Gouy M. Interfacing similarity search software with the sequence retrieval system ACNUC. Computer Applications in the Biosciences : Cabios. 3: 239-41. PMID 3453234 DOI: 10.1093/Bioinformatics/3.3.239 |
0.476 |
|
1987 |
Gouy M. Codon contexts in enterobacterial and coliphage genes. Molecular Biology and Evolution. 4: 426-44. PMID 3128715 DOI: 10.1093/Oxfordjournals.Molbev.A040450 |
0.489 |
|
1985 |
Gouy M, Gautier C, Milleret F. System analysis and nucleic acid sequence banks. Biochimie. 67: 433-6. PMID 4027278 DOI: 10.1016/S0300-9084(85)80260-1 |
0.623 |
|
1985 |
Savatier P, Trabuchet G, Faure C, Chebloune Y, Gouy M, Verdier G, Nigon VM. Evolution of the primate beta-globin gene region. High rate of variation in CpG dinucleotides and in short repeated sequences between man and chimpanzee. Journal of Molecular Biology. 182: 21-9. PMID 3999143 DOI: 10.1016/0022-2836(85)90024-5 |
0.538 |
|
1985 |
Gouy M, Gautier C, Attimonelli M, Lanave C, di Paola G. ACNUC--a portable retrieval system for nucleic acid sequence databases: logical and physical designs and usage. Computer Applications in the Biosciences : Cabios. 1: 167-72. PMID 3880341 DOI: 10.1093/Bioinformatics/1.3.167 |
0.675 |
|
1985 |
Gautier C, Gouy M, Louail S. Non-parametric statistics for nucleic acid sequence study. Biochimie. 67: 449-53. PMID 2992611 DOI: 10.1016/S0300-9084(85)80263-7 |
0.628 |
|
1984 |
Papanicolaou C, Gouy M, Ninio J. An energy model that predicts the correct folding of both the tRNA and the 5S RNA molecules. Nucleic Acids Research. 12: 31-44. PMID 6694903 DOI: 10.1093/Nar/12.1Part1.31 |
0.321 |
|
1984 |
Gouy M, Milleret F, Mugnier C, Jacobzone M, Gautier C. ACNUC: a nucleic acid sequence data base and analysis system. Nucleic Acids Research. 12: 121-7. PMID 6694896 DOI: 10.1093/Nar/12.1Part1.121 |
0.633 |
|
1982 |
Gouy M, Gautier C. Codon usage in bacteria: correlation with gene expressivity. Nucleic Acids Research. 10: 7055-74. PMID 6760125 DOI: 10.1093/Nar/10.22.7055 |
0.71 |
|
1981 |
Grantham R, Gautier C, Gouy M, Jacobzone M, Mercier R. Codon catalog usage is a genome strategy modulated for gene expressivity. Nucleic Acids Research. 9: r43-74. PMID 7208352 DOI: 10.1093/Nar/9.1.213-B |
0.795 |
|
1980 |
Gouy M, Grantham R. Polypeptide elongation and tRNA cycling in Escherichia coli: a dynamic approach. Febs Letters. 115: 151-5. PMID 6995150 DOI: 10.1016/0014-5793(80)81155-0 |
0.577 |
|
1980 |
Grantham R, Gautier C, Gouy M, Mercier R, Pavé A. Codon catalog usage and the genome hypothesis. Nucleic Acids Research. 8: r49-r62. PMID 6986610 DOI: 10.1093/Nar/8.1.197-C |
0.808 |
|
1980 |
Grantham R, Gautier C, Gouy M. Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type. Nucleic Acids Research. 8: 1893-912. PMID 6159596 DOI: 10.1093/Nar/8.9.1893 |
0.786 |
|
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