| Year |
Citation |
Score |
| 2023 |
Jagtap PD, Hoopmann MR, Neely BA, Harvey A, Käll L, Perez-Riverol Y, Abajorga MK, Thomas JA, Weintraub ST, Palmblad M. The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020). Journal of Biomolecular Techniques : Jbt. 34. PMID 37969874 DOI: 10.7171/3fc1f5fe.a058bad4 |
0.555 |
|
| 2023 |
Kirkpatrick J, Stemmer PM, Searle BC, Herring LE, Martin L, Midha MK, Phinney BS, Shan B, Palmblad M, Wang Y, Jagtap PD, Neely BA. 2019 Association of Biomolecular Resource Facilities Multi-Laboratory Data-Independent Acquisition Proteomics Study. Journal of Biomolecular Techniques : Jbt. 34. PMID 37435391 DOI: 10.7171/3fc1f5fe.9b78d780 |
0.552 |
|
| 2023 |
Neely BA, Dorfer V, Martens L, Bludau I, Bouwmeester R, Degroeve S, Deutsch EW, Gessulat S, Käll L, Palczynski P, Payne SH, Rehfeldt TG, Schmidt T, Schwämmle V, Uszkoreit J, et al. Toward an Integrated Machine Learning Model of a Proteomics Experiment. Journal of Proteome Research. PMID 36744821 DOI: 10.1021/acs.jproteome.2c00711 |
0.56 |
|
| 2023 |
Rehfeldt TG, Gabriels R, Bouwmeester R, Gessulat S, Neely BA, Palmblad M, Perez-Riverol Y, Schmidt T, Vizcaíno JA, Deutsch EW. ProteomicsML: An Online Platform for Community-Curated Data sets and Tutorials for Machine Learning in Proteomics. Journal of Proteome Research. PMID 36693629 DOI: 10.1021/acs.jproteome.2c00629 |
0.566 |
|
| 2022 |
Neely BA, Palmblad M. Machine Learning in Proteomics and Metabolomics. Journal of Proteome Research. PMID 36193949 DOI: 10.1021/acs.jproteome.2c00566 |
0.505 |
|
| 2022 |
Marissen R, Varunjikar MS, Laros JFJ, Rasinger JD, Neely BA, Palmblad M. compareMS2 2.0: An Improved Software for Comparing Tandem Mass Spectrometry Datasets. Journal of Proteome Research. PMID 36173614 DOI: 10.1021/acs.jproteome.2c00457 |
0.535 |
|
| 2021 |
Neely BA, Palmblad M. Rewinding the Molecular Clock: Looking at Pioneering Molecular Phylogenetics Experiments in the Light of Proteomics. Journal of Proteome Research. 20: 4640-4645. PMID 34523928 DOI: 10.1021/acs.jproteome.1c00528 |
0.536 |
|
| 2020 |
Heck M, Neely BA. Proteomics in non-model organisms: a new analytical frontier. Journal of Proteome Research. PMID 32786681 DOI: 10.1021/Acs.Jproteome.0C00448 |
0.304 |
|
| 2020 |
Heck M, Neely BA. Proteomics inNon-model Organisms: A New AnalyticalFrontier Journal of Proteome Research. DOI: 10.1021/Acs.Jproteome.0C00448.S001 |
0.305 |
|
| 2019 |
Davis WC, Kilpatrick LE, Ellisor DL, Neely BA. Characterization of a human liver reference material fit for proteomics applications. Scientific Data. 6: 324. PMID 31852895 DOI: 10.1038/S41597-019-0336-7 |
0.33 |
|
| 2019 |
Saito MA, Bertrand EM, Duffy ME, Gaylord DA, Held NA, Hervey WJ, Hettich RL, Jagtap P, Janech MG, Kinkade DB, Leary D, McIlvin M, Moore E, Morris R, Neely BA, et al. Progress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data Sharing. Journal of Proteome Research. PMID 30702898 DOI: 10.1021/Acs.Jproteome.8B00761 |
0.314 |
|
| 2018 |
Neely BA, Prager K, Bland AM, Fontaine C, Gulland FM, Janech MG. Proteomic Analysis of Urine from California Sea Lions (Zalophus californianus): a Resource for Urinary Biomarker Discovery. Journal of Proteome Research. PMID 30113852 DOI: 10.1021/Acs.Jproteome.8B00416 |
0.324 |
|
| 2016 |
Neely BA, Wilkins CE, Marlow LA, Malyarenko D, Kim Y, Ignatchenko A, Sasinowska H, Sasinowski M, Nyalwidhe JO, Kislinger T, Copland JA, Drake RR. Proteotranscriptomic Analysis Reveals Stage Specific Changes in the Molecular Landscape of Clear-Cell Renal Cell Carcinoma. Plos One. 11: e0154074. PMID 27128972 DOI: 10.1371/Journal.Pone.0154074 |
0.359 |
|
| 2015 |
Neely BA, Soper JL, Gulland FM, Bell PD, Kindy M, Arthur JM, Janech MG. Proteomic analysis of cerebrospinal fluid in California sea lions (Zalophus californianus) with domoic acid toxicosis identifies proteins associated with neurodegeneration. Proteomics. PMID 26364553 DOI: 10.1002/Pmic.201500167 |
0.334 |
|
| 2015 |
Drake RR, Powers TW, Neely BA. Abstract 540: A MALDI imaging mass spectrometry approach using tissue microarrays to identify an N-glycan biomarker panel for pancreatic cancers Cancer Research. 75: 540-540. DOI: 10.1158/1538-7445.Am2015-540 |
0.304 |
|
| 2014 |
Neely BA, Ferrante JA, Chaves JM, Soper JL, Almeida JS, Arthur JM, Gulland FM, Janech MG. Proteomic Analysis of Plasma from California Sea Lions (Zalophus californianus) Reveals Apolipoprotein E as a Candidate Biomarker of Chronic Domoic Acid Toxicosis. Plos One. 10: e0123295. PMID 25919366 DOI: 10.1371/Journal.Pone.0123295 |
0.338 |
|
| 2014 |
Jones EE, Powers TW, Neely BA, Cazares LH, Troyer DA, Parker AS, Drake RR. MALDI imaging mass spectrometry profiling of proteins and lipids in clear cell renal cell carcinoma. Proteomics. 14: 924-35. PMID 24497498 DOI: 10.1002/Pmic.201300434 |
0.326 |
|
| 2008 |
Van Nostrand JD, Arthur JM, Kilpatrick LE, Neely BA, Bertsch PM, Morris PJ. Changes in protein expression in Burkholderia vietnamiensis PR1 301 at pH 5 and 7 with and without nickel. Microbiology (Reading, England). 154: 3813-24. PMID 19047749 DOI: 10.1099/Mic.0.2008/017178-0 |
0.505 |
|
| 2007 |
Van Nostrand JD, Khijniak TJ, Neely B, Sattar MA, Sowder AG, Mills G, Bertsch PM, Morris PJ. Reduction of nickel and uranium toxicity and enhanced trichloroethylene degradation to Burkholderia vietnamiensis PR1301 with hydroxyapatite amendment. Environmental Science & Technology. 41: 1877-82. PMID 17410778 DOI: 10.1021/Es0616581 |
0.489 |
|
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